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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF04731 - Caudal_act) |
| Caudal like protein activation region |
| (Pfam reference: accession no. PF04731) |
| (Interpro reference: accession no. IPR006820) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
9 sequences @ 196 aa (ave. pairwise identity: 0.42) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 4.42) |
| nucleotides (available for above) |
8 sequences @ 588 bp (ave. pairwise identity: 0.52) |
New Hampshire format (total tree length: 2.91) |
|
amino acids, restricted set (corresp. to available nt seqs) |
8 sequences @ 196 aa (ave. pairwise identity: 0.42) |
New Hampshire format (total tree length: 3.87) |