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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF04719 - TAFII28)
hTAFII28-like protein conserved region
(
Pfam
reference: accession no.
PF04719
)
(
Interpro
reference: accession no.
IPR006809
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
10 sequences @ 100 aa
(ave. pairwise identity: 0.40)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 5.47)
nucleotides
(available for above)
10 sequences @ 300 bp
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 4.31)
amino acids, restricted set
(corresp. to available nt seqs)
10 sequences @ 100 aa
(ave. pairwise identity: 0.40)
New Hampshire format
(total tree length: 5.47)