EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF04644 - Motilin_ghrelin)
Motilin/ghrelin
(Pfam reference: accession no. PF04644)
(Interpro reference: accession no. IPR006738)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
6 sequences @ 29 aa
(ave. pairwise identity: 0.49)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.61)
nucleotides
(available for above)
6 sequences @ 87 bp
(ave. pairwise identity: 0.63)
New Hampshire format
(total tree length: 1.57)
amino acids, restricted set
(corresp. to available nt seqs)
6 sequences @ 29 aa
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 3.61)