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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF04617 - Hox9_act) |
| Hox9 activation region |
| (Pfam reference: accession no. PF04617) |
| (Interpro reference: accession no. IPR006711) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
17 sequences @ 285 aa (ave. pairwise identity: 0.38) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 8.81) |
| nucleotides (available for above) |
16 sequences @ 855 bp (ave. pairwise identity: 0.49) |
New Hampshire format (total tree length: 6.19) |
|
amino acids, restricted set (corresp. to available nt seqs) |
16 sequences @ 285 aa (ave. pairwise identity: 0.39) |
New Hampshire format (total tree length: 8.12) |