EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF04595 - Pox_I6)
Poxvirus I6-like family
(Pfam reference: accession no. PF04595)
(Interpro reference: accession no. IPR007674)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
10 sequences @ 356 aa
(ave. pairwise identity: 0.36)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 6.07)
nucleotides
(available for above)
9 sequences @ 1068 bp
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 4.58)
amino acids, restricted set
(corresp. to available nt seqs)
9 sequences @ 356 aa
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 6.79)