EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04539 phylogeny
for amino acid alignment


 
((((((((((((((((((RPOD_RHOCA/514-596,RPOD_MYXXA/548-630),(O67464_AQUAE/416-498,((Q9JTK6_NEIMA/477-559,(O08348_XANCP/461-543,Q9KH26_COXBU/248-330)),((RPOD_THEMA/233-315,(O32637_HELPY/524-606,O52921_CAMJE/459-541)),(RPOD_TREPA/451-533,P77820_BORAF/305-387))))),RPOD_CLOAB/219-301),O08332_STAAU/209-291),(RPOD_STRPN/209-291,RPOD_CHLTR/395-477)),(HRDA_STRCO/237-319,Q9R5W0_STRGR/198-280)),(HRDB_STRCO/352-434,O85679_MICEC/24-106)),(HRDC_STRCO/180-262,(P77906_MYCTU/186-268,Q79VF3_CORGL/172-254))),(((((((Q9FD90_SYNEL/237-318,RPSC_ANASP/255-336),P96035_SYNSP/237-318),RPSC_SYNY3/243-324),(((Q9KHE8_ANASP/175-256,(P73666_SYNY3/161-242,P96034_SYNSP/161-241)),Q9R6V8_SYNP7/163-244),(P96032_SYNSP/170-251,(Q55350_SYNSP/163-244,((Q9KHE5_ANASP/170-251,(O30967_NOSPU/172-254,RPSB_ANASP/175-256)),Q55525_SYNY3/187-268))))),(Q9KHE4_ANASP/230-312,P73710_SYNY3/210-292)),(P71149_CHLTE/140-221,((Q9F8R5_ECOLI/168-250,O32416_VIBCH/169-251),(Q9S4T1_LEGPN/181-263,(O33503_PSETO/175-257,Q9KI19_COXBU/191-273))))),HRDD_STRCO/174-256)),(P77842_CHLAU/237-319,(RPOD_SYNP7/226-307,(((Q9ZSL6_ARATH/257-339,(O22056_ARATH/410-492,(Q9ZPL2_MAIZE/376-457,Q9ZPL1_MAIZE/364-445))),(Q9LD95_ARATH/385-467,Q9ZPL0_MAIZE/379-460)),Q9AYR7_PHYPA/414-496)))),((P77841_CHLAU/151-233,P71106_CHLAU/187-269),P77840_CHLAU/184-266)),Q9ZTL1_CYACA/409-489),((O64419_CYACA/250-332,Q39477_CYACA/411-491),Q9ZNX9_ARATH/359-440)),(O24348_SORBI/335-415,(Q9FPH1_ARATH/337-418,Q9SLX4_TOBAC/343-423))),(((RPSB_BACAN/108-189,((P95844_STAAU/109-191,O50232_BACLI/110-191),Q9KFF0_BACHD/108-189)),RPOF_STRCO/141-222),((Q9RIS8_STRCO/118-198,(Q55358_STRSE/106-185,Q9ZIV9_9ACTO/193-274)),((P96891_MYCBO/117-197,Q9RIT0_STRCO/215-294),Q9RIS5_STRCO/157-237)))),Q9KA59_BACHD/102-182),((Q9L7Q0_PROMI/90-172,FLIA_ECOLI/90-172),(Q9KQD4_VIBCH/93-174,(O52258_PSEPU/94-174,Q9L774_XANOR/94-174)))),P77959_STRRP/122-203,Q59823_STRAU/122-202);
((((((((((((((((((RPOD_RHOCA/514-596:0.17869,RPOD_MYXXA/548-630:0.10261):0.04513,(O67464_AQUAE/416-498:0.37983,((Q9JTK6_NEIMA/477-559:0.20799,(O08348_XANCP/461-543:0.08985,Q9KH26_COXBU/248-330:0.17038):0.04445):0.07116,((RPOD_THEMA/233-315:0.52557,(O32637_HELPY/524-606:0.15258,O52921_CAMJE/459-541:0.16177):0.35450):0.03550,(RPOD_TREPA/451-533:0.19492,P77820_BORAF/305-387:0.34365):0.25613):0.11456):0.02389):0.03434):0.12625,RPOD_CLOAB/219-301:0.09119):0.05890,O08332_STAAU/209-291:0.12898):0.03563,(RPOD_STRPN/209-291:0.12962,RPOD_CHLTR/395-477:0.56867):0.06037):0.03016,(HRDA_STRCO/237-319:0.13418,Q9R5W0_STRGR/198-280:0.20852):0.38642):0.09271,(HRDB_STRCO/352-434:0.13187,O85679_MICEC/24-106:0.14654):0.13537):0.06494,(HRDC_STRCO/180-262:0.60855,(P77906_MYCTU/186-268:0.09543,Q79VF3_CORGL/172-254:0.17482):0.26956):0.28547):0.06080,(((((((Q9FD90_SYNEL/237-318:0.17791,RPSC_ANASP/255-336:0.12335):0.10457,P96035_SYNSP/237-318:0.13563):0.08051,RPSC_SYNY3/243-324:0.17069):0.23622,(((Q9KHE8_ANASP/175-256:0.17646,(P73666_SYNY3/161-242:0.03499,P96034_SYNSP/161-241:0.22695):0.08082):0.02008,Q9R6V8_SYNP7/163-244:0.25247):0.08797,(P96032_SYNSP/170-251:0.14023,(Q55350_SYNSP/163-244:0.22980,((Q9KHE5_ANASP/170-251:0.11108,(O30967_NOSPU/172-254:0.39872,RPSB_ANASP/175-256:0.28612):0.12317):0.08347,Q55525_SYNY3/187-268:0.15215):0.01878):0.09413):0.07789):0.16755):0.04513,(Q9KHE4_ANASP/230-312:0.18336,P73710_SYNY3/210-292:0.19330):0.32894):0.16601,(P71149_CHLTE/140-221:0.83618,((Q9F8R5_ECOLI/168-250:0.16386,O32416_VIBCH/169-251:0.18784):0.08126,(Q9S4T1_LEGPN/181-263:0.24057,(O33503_PSETO/175-257:0.21651,Q9KI19_COXBU/191-273:0.48768):0.03191):0.15047):0.61655):0.17160):0.19548,HRDD_STRCO/174-256:0.52154):0.08502):0.14397,(P77842_CHLAU/237-319:0.48178,(RPOD_SYNP7/226-307:0.37128,(((Q9ZSL6_ARATH/257-339:0.76307,(O22056_ARATH/410-492:0.44280,(Q9ZPL2_MAIZE/376-457:0.01711,Q9ZPL1_MAIZE/364-445:0.34035):0.36542):0.26641):0.24529,(Q9LD95_ARATH/385-467:0.27185,Q9ZPL0_MAIZE/379-460:0.55386):0.78118):0.12805,Q9AYR7_PHYPA/414-496:0.28168):0.22234):0.14543):0.08280):0.14570,((P77841_CHLAU/151-233:1.14287,P71106_CHLAU/187-269:0.46930):0.23301,P77840_CHLAU/184-266:0.37896):0.27022):0.15859,Q9ZTL1_CYACA/409-489:0.82944):0.48507,((O64419_CYACA/250-332:1.09823,Q39477_CYACA/411-491:0.53744):0.39384,Q9ZNX9_ARATH/359-440:0.95271):0.35375):0.01062,(O24348_SORBI/335-415:0.00000,(Q9FPH1_ARATH/337-418:0.22348,Q9SLX4_TOBAC/343-423:0.11149):0.32316):1.08631):0.29892,(((RPSB_BACAN/108-189:0.45506,((P95844_STAAU/109-191:0.30169,O50232_BACLI/110-191:0.17923):0.06764,Q9KFF0_BACHD/108-189:0.10363):0.36925):0.23370,RPOF_STRCO/141-222:0.78247):0.15251,((Q9RIS8_STRCO/118-198:0.46710,(Q55358_STRSE/106-185:0.50808,Q9ZIV9_9ACTO/193-274:0.23744):0.34438):0.10721,((P96891_MYCBO/117-197:0.59149,Q9RIT0_STRCO/215-294:0.24705):0.11814,Q9RIS5_STRCO/157-237:0.38424):0.18681):0.16803):0.11593):0.36856,Q9KA59_BACHD/102-182:0.61766):0.34030,((Q9L7Q0_PROMI/90-172:0.28855,FLIA_ECOLI/90-172:0.18553):0.40598,(Q9KQD4_VIBCH/93-174:0.86683,(O52258_PSEPU/94-174:0.51342,Q9L774_XANOR/94-174:0.91306):0.31085):0.12363):0.48217):0.69994,P77959_STRRP/122-203:0.12880,Q59823_STRAU/122-202:0.19308);