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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04493 alignment
(14 sequences with 248 aa)


NFI_THEAC/123-318 KMQQYQEYIARKYSESGAGEF-.RTVAAFDVSY----EERRAFASMVIQ---DGSTIEAYVI-SDGINFPYIPGYLAFREFR----FIKKLYRKAD............---.--.---LLLIDGNGILHPRFAGLATHAGVLLDRASIGVAKHLTRST.RHQDIIYMQDR--------PVGVMIRK-.---NMIVSPGNFI-DVNGSADTVRKMWND-RYPWPLKLAHQLSTRHAETGGRVSEYSIES
NFI_THEVO/118-313 KLRELQFKIGRLYDDRNDYSL-.DTIAAFDVSY----KETRGYASKVVY---NKGKIGAYVY-SSDSMFPYIPGYLAFKEFK----FIRALYDNET............---.--.---MILIDGNGILHPRFAGLATHAGVSLKTASIGIAKHLINCT.VKGSDLLISGV--------VAGKMIGH-.---HTIVSPGNRI-NVEEAGRLIEQREGK-EMRSLLRLAHNLTRLHIETNGNIARYDFST
NFI_PYRAB/4-194 KIAEVQKKLSKRIVEKEVRMV-.SKIAAVDVSY----KGNKARVALVICSFPDCKVLKTKVL-ETEVSFPYIPTFFFLRETRPI--LLVTKGEEFD............---.--.---VLIVEGHGKAHPRKYGLASHIGLILGKPTIGVAKKLLRGT.PENSYRKVG-------------------.---KAYVSVGNMI-TLKDAVRIIEKLLDG-GYPKPLKLADKLSKGKISEDENTLPSDKTS
NFI_PYRHO/4-195 RIANIQKKLSKSIVERKINEV-.RKVAAVDVSY----KEEKARAALVITTFPEGEVLKTKVI-ETTVSFPYIPTFFFLRETKPI--LIATKGETFD............---.--.---VLIVEGHGKAHPRGYGLASHIGVVLRKPTIGVAKRLLKNT.PKDTYKKVG-------------------.---KVYVSVGNLI-TLEDATKIIRAILDESGYPKPLKLADKLSKGRIYEVKNTPSPNRSR
YDA6_SCHPO/16-239 QQIELKGMLQLIPKFQSLNEI-.RYVVGLDISFDK--SSPKAVSALVIYDLEQRMIIYKDYLCIEKLEEDYVPGFLSFREIKWYLPLLNHIPHQFR............---.--.-IDIILVDGNGVLHPVGFGLACHLGVLLNLPVVGVAKNYLHCVgLTESLDAHRETLKKHVLKKTTDHPILIHsIDQSSEILGAAVWTSSNSKRPVYVSIGNQMNLEQSIQLVQKCSSSHSRVPEPIRQADIYA
Q9M087_ARATH/33-269 AYDDFTWKLSSSTELSQGSEIL.KYVGGVDMSFCKE-DSSVACACLVVLELPSLRVVHHDFS-LLRLHVPYVPGFLAFREAPVLLQILQKMRDEKHpfypqvsvlsisCFIsCFaLAKVLMVDGNGILHPRGFGLACHLGVLAHLPTIGVGKNLHHVD.GLNQSEVKQSLQLQINEHEQTITLVGN-.---SGITWGVGFRPTLSSLKPIYVSVGHRISLDSAVEVVKITCKY--RVPEPIRQADIRS
NFI_SULSO/9-192 FLEKLQFLISKNVKISHYGIENvKKICGVDIAY----KGNLGFSVGVSMDINSGDYNYKSYV--GEVNFPYIPGFLFMREAPLMIKAIEGLDCHLL............---.--.-----LVDGHGIAHPRKSGIAAVIGVLLDFPTIGVAKSRLTG-.--DLVNESE------------ITYVYL-.---NGEKVGVKFG------R-YFYSPGNKVDLQDCIELGKRGYPK--VL----KIADMLT
NFI_CLOAB/20-226 IQSSLVKRIKLISDFKEE-DI-.KLCAGVDLAYWTKGEKQYGVCCIIVIDYNTGEIIEKAYD-YGEIEVPYMPGFLAFRELPLVIKTVKKLKNEPD............---.--.---IFMFDGNGYLHYNHMGIATHASFFLNKPTIGVAKSYLKVA.GVDFEMPESFE--------GAFKDIVI-.---NEEVYGRVLR-TKKDVKPIFVSCGNYIDLETCTKICSKLINNDSRLPITVRLADLET
NFI_BACSU/20-226 VQFNLKNRINLSPTIHPD-SI-.NTGAGVDLAYWEQDGEPYGVCCIIVIDADTKEVIEKVHS-MGRISVPYVSGFLAFRELPLIIEAAKKLETEPD............---.--.---VFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIK.GCDFVTPEIEV--------GAYTDIII-.---DGEVYGRALR-TRRDVKPIFLSCGNYIDLDSSYQITMSLINQESRLPIPVRLADLET
NFI_STRCO/22-222 VQDELRARVVLDEPGPPPGTG-.-RVTGVDVAYDD--ERDVVAAAAVVLDAGTLAVVAEATA-VGRISFPYVPGLLAFREIPTVLAALEALPCPPG............---.--.---LVVCDGYGLAHPRRFGLASHLGVLTGLPTIGVAKNPFTF-.--THDDPDTPR--------GSTSPLLA-.---GAEEVGRAVR-TRDGVKPVFVSVGHRVGLGNACAHTLALTPA-YRLPETTRRADALC
NFI_THEMA/19-217 VQNELRKKIKLTPYEGEP----.EYVAGVDLSFP---GKEEGLAVIVVLEYPSFKILEVVSE-RGEITFPYIPGLLAFREGPLFLKAWEKLRTKPD............---.--.---VVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRLYG-.--TFKMPEDKR--------CSWSYLYD-.---GEEIIGCVIR-TKEGSAPIFVSPGHLMDVESSKRLIKAFTLPGRRIPEPTRLAHIYT
NFI_ARCFU/12-207 IQEEMSRSVVLEDLIPLE-EL-.EYVVGVDQAF----ISDEVVSCAVKLTFPELEVVDKAVR-VEKVTFPYIPTFLMFREGEPAVNAVKGLVDDRA............---.--.---AIMVDGSGIAHPRRCGLATYIALKLRKPTVGITKKRLFG-.--EMVEVEDG-----------LWRLLD-.---GSETIGYALK-SCRRCKPIFISPGSYISPDSALELTRKCLKG-YKLPEPIRIADKLT
NFI_ECOLI/9-209 QQIELASSVIREDRLDKD-PP-.DLIAGADVGFEQGGEVTR--AAMVLLKYPSLELVEYKVA-RIATTMPYIPGFLSFREYPALLAAWEMLSQKPD............---.--.---LVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCG-.--KFEPLSSEP--------GALAPLMD-.---KGEQLAWVWR-SKARCNPLFIATGHRVSVDSALAWVQRCMKG-YRLPEPTRWADAVA
NFI_XYLFA/23-224 LQSDMAERIVLKDDLNLLSEP-.TLLAGFDVGFEDEGRTTR--AAAVLMNACDLKLLETHVV-RVPTSMPYVPGLLSFRELPALLQALTQLSRIPA............---.--.---LVFVDGHGIAHPRRLGIAAHFGLVTNLPCIGVAKKRLVG-.--DFVEPGTAF--------GEHTPILL-.---HGTQVGWALR-SKIRCKPLMISPGHKISLHSALTWTQRCLNG-YRLPEPTRQADRLA