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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04452 phylogeny
for restricted amino acid alignment


 
((((((((((((((Q6AEC1_LEIXX/18-236,(Q6A996_PROAC/19-238,((Q82BY2_STRAW/19-243,Q9RDD9_STRCO/21-243),((Q6NG15_CORDI/26-247,Q8NNB5_CORGL/18-236),(Y2393_MYCBO/18-242,(Q73XZ7_MYCPA/18-242,Q9CCN1_MYCLE/18-246)))))),(Q8G5Y7_BIFLO/28-259,Q83GJ2_TROWT/19-230)),Q72BF1_DESVH/15-234),(Q8KAZ3_CHLTE/18-236,Q74G06_GEOSL/16-240)),(((Q6E297_ARATH/69-288,((Q6MAP1_PARUW/18-233,Q9X1A0_THEMA/14-217),(Q7MT38_PORGI/15-239,Q89ZP8_BACTN/13-229))),(((Q7ND55_GLOVI/19-229,(Y722_SYNY3/80-299,(Q8DI45_SYNEL/47-258,Q8YX66_ANASP/19-231))),(Q72K73_THET2/18-224,Q9RU73_DEIRA/24-239)),((Q7PAV9_RICSI/18-235,(Q73FW1_WOLPM/18-226,((Q6G0I7_BARQU/22-239,((Q7D102_AGRT5/22-239,Q92RS8_RHIME/22-239),(((Q6NAN3_RHOPA/23-243,Q89DB6_BRAJA/24-242),Q987U8_RHILO/16-233),Q8FVR3_BRUSU/16-233))),(Q9A2Z1_CAUCR/16-232,Q9RH08_ZYMMO/27-242)))),(((Q7VBR8_PROMA/24-246,(Q7V7G0_PROMM/24-244,Q7U730_SYNPX/24-238)),Q7V223_PROMP/22-248),Q72R34_LEPIC/17-226)))),(((((Q7P147_CHRVO/16-235,Q9JW64_NEIMA/16-235),Q8XVR6_RALSO/18-244),Q82WB5_NITEU/17-247),(Q7VZC1_BORPE/18-240,(Q87EY9_XYLFT/18-239,Q8P6T0_XANCP/18-239))),((Q83AE1_COXBU/18-233,((Q87V65_PSESM/19-234,Q9I694_PSEAE/19-234),((Y410_BUCAI/27-247,Y395_BUCAP/20-240),((Q6LMM5_PHOPR/2-219,Q87LK2_VIBPA/18-237),(Q8EIK7_SHEON/18-237,((Y303_HAEIN/18-238,Q7VKS8_HAEDU/18-238),((Q6D078_ERWCT/19-238,YGGJ_ECOLI/18-237),Q8ZHG4_YERPE/18-237))))))),(Q6FA41_ACIAD/16-235,Q9F9G9_9GAMM/17-236))))),(((((Q71ZK0_LISMF/17-245,(((Q833H7_ENTFA/16-244,Q88VQ0_LACPL/18-245),((Q8DNP5_STRR6/18-245,((Q8K5R0_STRP3/14-241,Q8DX86_STRA5/14-241),Q8DS03_STRMU/14-241)),Q9CJ96_LACLA/18-245)),(Q6G8Z0_STAAS/16-244,Q8CSC8_STAEP/19-247))),(YQEU_BACSU/19-247,Q9KD69_BACHD/16-244)),Q6HDL0_BACHK/16-243),Q8EPW6_OCEIH/16-246),(((Q7P2R8_FUSNV/14-232,((Y181_MYCHY/14-226,(Q6KI62_MYCMO/14-223,Q98Q27_MYCPU/14-222)),((Q8EWP2_MYCPE/13-228,Q9PQJ0_UREPA/14-231),Q6F1G3_MESFL/14-235))),Y165_AQUAE/13-228),(Q8RB65_THETN/16-239,(Q9ZIA2_CLOAB/16-241,(Q892R3_CLOTE/16-241,Q8XIT7_CLOPE/16-241)))))),Q6MI96_BDEBA/16-247),Q73LI5_TREDE/15-246),Y358_BORBU/16-236),(Q7MQN6_WOLSU/14-220,((Y374_HELPY/14-226,Q9PIX1_CAMJE/14-218),Q7VHH3_HELHP/14-232))),(Y062_BORBU/15-233,(Y032_TREPA/18-242,Q73J56_TREDE/35-272))),Q72R98_LEPIC/18-253),(Q6AMJ0_DESPS/17-250,(Q7U7K3_SYNPX/18-237,(Q6F738_ACIAD/16-235,((Q87UY4_PSESM/17-235,Q88D10_PSEPK/17-235),Q9HUB2_PSEAE/17-235))))),Q6LF88_PLAF7/19-252,Q7RMG7_PLAYO/19-251);
((((((((((((((Q6AEC1_LEIXX/18-236:0.60514,(Q6A996_PROAC/19-238:0.55585,((Q82BY2_STRAW/19-243:0.14901,Q9RDD9_STRCO/21-243:0.14866):0.26972,((Q6NG15_CORDI/26-247:0.30433,Q8NNB5_CORGL/18-236:0.39642):0.11704,(Y2393_MYCBO/18-242:0.09144,(Q73XZ7_MYCPA/18-242:0.13189,Q9CCN1_MYCLE/18-246:0.16552):0.05839):0.45750):0.13720):0.11174):0.11471):0.20159,(Q8G5Y7_BIFLO/28-259:0.76908,Q83GJ2_TROWT/19-230:0.83104):0.18052):0.27661,Q72BF1_DESVH/15-234:1.04130):0.12098,(Q8KAZ3_CHLTE/18-236:0.78591,Q74G06_GEOSL/16-240:0.65270):0.17756):0.13969,(((Q6E297_ARATH/69-288:0.94921,((Q6MAP1_PARUW/18-233:0.89530,Q9X1A0_THEMA/14-217:0.70003):0.17481,(Q7MT38_PORGI/15-239:0.54924,Q89ZP8_BACTN/13-229:0.51096):0.42721):0.14773):0.08285,(((Q7ND55_GLOVI/19-229:0.65088,(Y722_SYNY3/80-299:0.36799,(Q8DI45_SYNEL/47-258:0.66604,Q8YX66_ANASP/19-231:0.35385):0.13789):0.18195):0.17360,(Q72K73_THET2/18-224:0.45642,Q9RU73_DEIRA/24-239:0.51219):0.36489):0.21338,((Q7PAV9_RICSI/18-235:0.70154,(Q73FW1_WOLPM/18-226:0.67064,((Q6G0I7_BARQU/22-239:0.41905,((Q7D102_AGRT5/22-239:0.17887,Q92RS8_RHIME/22-239:0.19958):0.17800,(((Q6NAN3_RHOPA/23-243:0.09359,Q89DB6_BRAJA/24-242:0.21070):0.34888,Q987U8_RHILO/16-233:0.20758):0.07624,Q8FVR3_BRUSU/16-233:0.31097):0.04800):0.10690):0.22841,(Q9A2Z1_CAUCR/16-232:0.45175,Q9RH08_ZYMMO/27-242:0.49844):0.09964):0.28499):0.13033):0.17302,(((Q7VBR8_PROMA/24-246:0.48941,(Q7V7G0_PROMM/24-244:0.52131,Q7U730_SYNPX/24-238:0.58389):0.27534):0.08669,Q7V223_PROMP/22-248:0.64516):0.65219,Q72R34_LEPIC/17-226:1.07924):0.12059):0.12424):0.12470):0.07317,(((((Q7P147_CHRVO/16-235:0.32435,Q9JW64_NEIMA/16-235:0.48797):0.13323,Q8XVR6_RALSO/18-244:0.54632):0.04513,Q82WB5_NITEU/17-247:0.56247):0.09973,(Q7VZC1_BORPE/18-240:0.55932,(Q87EY9_XYLFT/18-239:0.26009,Q8P6T0_XANCP/18-239:0.28410):0.36594):0.07211):0.11309,((Q83AE1_COXBU/18-233:0.59286,((Q87V65_PSESM/19-234:0.12688,Q9I694_PSEAE/19-234:0.14443):0.28918,((Y410_BUCAI/27-247:0.34506,Y395_BUCAP/20-240:0.23304):0.41983,((Q6LMM5_PHOPR/2-219:0.11590,Q87LK2_VIBPA/18-237:0.12036):0.11555,(Q8EIK7_SHEON/18-237:0.29377,((Y303_HAEIN/18-238:0.11798,Q7VKS8_HAEDU/18-238:0.19454):0.10455,((Q6D078_ERWCT/19-238:0.17649,YGGJ_ECOLI/18-237:0.10534):0.02998,Q8ZHG4_YERPE/18-237:0.16340):0.09522):0.03331):0.05213):0.13908):0.25088):0.08606):0.09486,(Q6FA41_ACIAD/16-235:0.53422,Q9F9G9_9GAMM/17-236:0.51791):0.16643):0.07498):0.20568):0.11011):0.17019,(((((Q71ZK0_LISMF/17-245:0.35605,(((Q833H7_ENTFA/16-244:0.33055,Q88VQ0_LACPL/18-245:0.52539):0.10395,((Q8DNP5_STRR6/18-245:0.16734,((Q8K5R0_STRP3/14-241:0.20138,Q8DX86_STRA5/14-241:0.13775):0.05895,Q8DS03_STRMU/14-241:0.16632):0.07939):0.26498,Q9CJ96_LACLA/18-245:0.39638):0.17713):0.06295,(Q6G8Z0_STAAS/16-244:0.17034,Q8CSC8_STAEP/19-247:0.18479):0.39573):0.08365):0.11279,(YQEU_BACSU/19-247:0.29052,Q9KD69_BACHD/16-244:0.42731):0.13021):0.08474,Q6HDL0_BACHK/16-243:0.27024):0.13557,Q8EPW6_OCEIH/16-246:0.32387):0.26095,(((Q7P2R8_FUSNV/14-232:0.73772,((Y181_MYCHY/14-226:0.44617,(Q6KI62_MYCMO/14-223:0.40118,Q98Q27_MYCPU/14-222:0.35043):0.13612):0.37230,((Q8EWP2_MYCPE/13-228:0.73456,Q9PQJ0_UREPA/14-231:0.66972):0.17243,Q6F1G3_MESFL/14-235:0.70382):0.11043):0.07105):0.06536,Y165_AQUAE/13-228:1.00521):0.06945,(Q8RB65_THETN/16-239:0.44416,(Q9ZIA2_CLOAB/16-241:0.19100,(Q892R3_CLOTE/16-241:0.25251,Q8XIT7_CLOPE/16-241:0.26358):0.09554):0.30981):0.17574):0.10277):0.07497):0.15186,Q6MI96_BDEBA/16-247:0.89437):0.16360,Q73LI5_TREDE/15-246:1.03572):0.22336,Y358_BORBU/16-236:0.86607):0.09564,(Q7MQN6_WOLSU/14-220:0.50397,((Y374_HELPY/14-226:0.43086,Q9PIX1_CAMJE/14-218:0.58772):0.19735,Q7VHH3_HELHP/14-232:0.50170):0.09505):0.52996):0.38816,(Y062_BORBU/15-233:0.81989,(Y032_TREPA/18-242:0.57333,Q73J56_TREDE/35-272:0.47550):0.39406):0.19455):0.10017,Q72R98_LEPIC/18-253:0.97131):0.19045,(Q6AMJ0_DESPS/17-250:0.54956,(Q7U7K3_SYNPX/18-237:0.61933,(Q6F738_ACIAD/16-235:0.59498,((Q87UY4_PSESM/17-235:0.12100,Q88D10_PSEPK/17-235:0.15407):0.05770,Q9HUB2_PSEAE/17-235:0.13350):0.28020):0.08939):0.27399):0.23233):0.92467,Q6LF88_PLAF7/19-252:0.10774,Q7RMG7_PLAYO/19-251:0.10715);