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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04452 phylogeny
for nucleotide alignment


 
(((((((Q7VHH3_HELHP/14-232,(Q7MQN6_WOLSU/14-220,Y374_HELPY/14-226)),Q9PIX1_CAMJE/14-218),(Q73LI5_TREDE/15-246,Q6MAP1_PARUW/18-233)),(((Q8EWP2_MYCPE/13-228,Q6F1G3_MESFL/14-235),((Y181_MYCHY/14-226,Q98Q27_MYCPU/14-222),Q6KI62_MYCMO/14-223)),((((Q8XIT7_CLOPE/16-241,(Q892R3_CLOTE/16-241,Q9ZIA2_CLOAB/16-241)),(Q8RB65_THETN/16-239,Y165_AQUAE/13-228)),(Q9PQJ0_UREPA/14-231,Q7P2R8_FUSNV/14-232)),((((Y358_BORBU/16-236,Q73FW1_WOLPM/18-226),(Q7V223_PROMP/22-248,((Q7U730_SYNPX/24-238,Q7V7G0_PROMM/24-244),Q7VBR8_PROMA/24-246))),(Q7PAV9_RICSI/18-235,(((Q6E297_ARATH/69-288,(((((Q6MI96_BDEBA/16-247,Q74G06_GEOSL/16-240),((((Q6A996_PROAC/19-238,Q83GJ2_TROWT/19-230),Q8G5Y7_BIFLO/28-259),(((Q6NG15_CORDI/26-247,Q8NNB5_CORGL/18-236),((Y2393_MYCBO/18-242,Q9CCN1_MYCLE/18-246),Q73XZ7_MYCPA/18-242)),(Q6AEC1_LEIXX/18-236,(Q82BY2_STRAW/19-243,Q9RDD9_STRCO/21-243)))),Q8KAZ3_CHLTE/18-236)),(((((Q87V65_PSESM/19-234,Q9I694_PSEAE/19-234),Q7VZC1_BORPE/18-240),((((Q87EY9_XYLFT/18-239,Q8P6T0_XANCP/18-239),(Q7P147_CHRVO/16-235,Q9JW64_NEIMA/16-235)),Q8XVR6_RALSO/18-244),(Q82WB5_NITEU/17-247,(((Q6LMM5_PHOPR/2-219,Q87LK2_VIBPA/18-237),(((Q6D078_ERWCT/19-238,YGGJ_ECOLI/18-237),Q8ZHG4_YERPE/18-237),((Q7VKS8_HAEDU/18-238,(Y303_HAEIN/18-238,(Y410_BUCAI/27-247,Y395_BUCAP/20-240))),Q8EIK7_SHEON/18-237))),(Q83AE1_COXBU/18-233,Q6FA41_ACIAD/16-235))))),Q9F9G9_9GAMM/17-236),((((Y722_SYNY3/80-299,Q8YX66_ANASP/19-231),Q8DI45_SYNEL/47-258),Q7ND55_GLOVI/19-229),(((Q9A2Z1_CAUCR/16-232,Q9RH08_ZYMMO/27-242),(((Q7D102_AGRT5/22-239,Q92RS8_RHIME/22-239),((Q8FVR3_BRUSU/16-233,Q6G0I7_BARQU/22-239),Q987U8_RHILO/16-233)),(Q6NAN3_RHOPA/23-243,Q89DB6_BRAJA/24-242))),(Q72K73_THET2/18-224,Q9RU73_DEIRA/24-239))))),Q72BF1_DESVH/15-234),(Q7MT38_PORGI/15-239,Q89ZP8_BACTN/13-229))),Q9X1A0_THEMA/14-217),Q72R34_LEPIC/17-226))),((Q8EPW6_OCEIH/16-246,(((Q9KD69_BACHD/16-244,(Q9CJ96_LACLA/18-245,((Q8K5R0_STRP3/14-241,((Q8DNP5_STRR6/18-245,Q8DX86_STRA5/14-241),Q8DS03_STRMU/14-241)),Q88VQ0_LACPL/18-245))),Q833H7_ENTFA/16-244),((YQEU_BACSU/19-247,Q6HDL0_BACHK/16-243),Q71ZK0_LISMF/17-245))),(Q6G8Z0_STAAS/16-244,Q8CSC8_STAEP/19-247)))))),Y062_BORBU/15-233),(Q72R98_LEPIC/18-253,((Y032_TREPA/18-242,Q73J56_TREDE/35-272),(Q6AMJ0_DESPS/17-250,((Q7U7K3_SYNPX/18-237,((Q87UY4_PSESM/17-235,Q88D10_PSEPK/17-235),Q9HUB2_PSEAE/17-235)),Q6F738_ACIAD/16-235))))),Q6LF88_PLAF7/19-252,Q7RMG7_PLAYO/19-251);
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