EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF04450 - BSP)
Plant Basic Secretory Protein
(Pfam reference: accession no. PF04450)
(Interpro reference: accession no. IPR007541)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
6 sequences @ 234 aa
(ave. pairwise identity: 0.58)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 1.91)
nucleotides
(available for above)
6 sequences @ 702 bp
(ave. pairwise identity: 0.63)
New Hampshire format
(total tree length: 1.51)
amino acids, restricted set
(corresp. to available nt seqs)
6 sequences @ 234 aa
(ave. pairwise identity: 0.58)
New Hampshire format
(total tree length: 1.91)