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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04389 phylogeny
for amino acid alignment


 
((((((((((((((((((Q86BD1_DROME/24-195,Q9V6A2_DROME/163-334),(Q9V8U1_DROME/165-336,Q9V8U0_DROME/165-336)),(Q8SX46_DROME/72-243,(Q9V8T9_DROME/151-321,Q8IH56_DROME/157-328))),Q8MT48_DROME/150-321),(Q7PT40_ANOGA/96-268,Q7QJV5_ANOGA/77-248)),((YP67_CAEEL/167-338,(Q7PQQ4_ANOGA/113-284,Q8BIM4_MOUSE/192-363)),O94702_SCHPO/154-322)),O64804_ARATH/146-318),(Q7X7Q3_ORYSA/128-297,Q9SXH2_IPOBA/146-316)),((YBS4_YEAST/149-315,Q9C2E0_NEUCR/178-345),YC6C_SCHPO/140-307)),((Q8GGR6_STRAZ/146-311,Q7MAY9_PHOLL/149-318),Q9A369_CAUCR/119-286)),(Q7PX79_ANOGA/222-389,Q7PX80_ANOGA/301-469)),((((Q82VZ8_NITEU/829-1008,(((Q9A4J1_CAUCR/335-529,(Q9A578_CAUCR/260-453,Q7ND13_GLOVI/309-501)),(((Q8EDI3_SHEON/278-480,Q8PEF6_XANCP/333-532),(Q8P3Z6_XANCP/298-496,((Q8PPS0_XANAC/311-509,Q87AH5_XYLFT/290-488),Q9A3U5_CAUCR/192-390))),Q8EF07_SHEON/278-467)),Q7UGZ5_RHOBA/480-666)),((Q7UQS9_RHOBA/733-948,Q8A5P9_BACTN/139-321),Q9YDB0_AERPE/249-412)),(Q8XIF2_CLOPE/231-402,(Q97F97_CLOAB/227-398,Q898V9_CLOTE/225-396))),(O67732_AQUAE/190-352,(((IAP_ECOLI/110-321,Q9F3Y1_PSEAE/119-319),(Q9HNP7_HALN1/224-389,Q9HRR8_HALN1/220-384)),(((YFI8_YEAST/119-344,(Q7S0R5_NEUCR/126-350,Q7SGU5_NEUCR/144-382)),((((Q7Q569_ANOGA/73-280,Q9VRQ9_DROME/107-312),Q9VTH7_DROME/129-318),((Q86PD7_DROME/130-333,Q7Q1Q7_ANOGA/145-349),(Q9YIB5_BOTJA/137-351,Q9D8Y3_MOUSE/162-366))),O17912_CAEEL/115-323)),((Q7MT37_PORGI/117-314,Q8A4P9_BACTN/117-317),Q7UHT1_RHOBA/176-373)))))),Q93EJ5_BACLI/248-421),Q8TL26_METAC/121-299),((Q7RZ44_NEUCR/250-445,APE3_YEAST/307-487),(Q9HZQ8_PSEAE/289-482,((Q7U215_MYCBO/264-463,Q53737_9ACTO/260-459),((Q9FBN5_STRCO/130-314,Q8CK35_STRCO/710-894),(Q82DU6_STRAW/116-300,APX_STRGR/78-262)))))),Q7RW54_NEUCR/218-393),O82996_AERPU/193-374),AMPX_VIBPR/196-377,Q9KLD3_VIBCH/193-374);
((((((((((((((((((Q86BD1_DROME/24-195:0.17448,Q9V6A2_DROME/163-334:0.22093):0.03895,(Q9V8U1_DROME/165-336:0.20307,Q9V8U0_DROME/165-336:0.19084):0.20400):0.07033,(Q8SX46_DROME/72-243:0.29477,(Q9V8T9_DROME/151-321:0.08176,Q8IH56_DROME/157-328:0.20742):0.05748):0.01792):0.06461,Q8MT48_DROME/150-321:0.19906):0.07459,(Q7PT40_ANOGA/96-268:0.30554,Q7QJV5_ANOGA/77-248:0.24327):0.28302):0.16181,((YP67_CAEEL/167-338:0.33909,(Q7PQQ4_ANOGA/113-284:0.32579,Q8BIM4_MOUSE/192-363:0.18045):0.08456):0.02284,O94702_SCHPO/154-322:0.61499):0.03582):0.11837,O64804_ARATH/146-318:0.63536):0.17530,(Q7X7Q3_ORYSA/128-297:0.23181,Q9SXH2_IPOBA/146-316:0.16427):0.38517):0.09710,((YBS4_YEAST/149-315:0.46102,Q9C2E0_NEUCR/178-345:0.48894):0.17552,YC6C_SCHPO/140-307:0.37088):0.34069):0.20122,((Q8GGR6_STRAZ/146-311:0.32028,Q7MAY9_PHOLL/149-318:0.65470):0.13070,Q9A369_CAUCR/119-286:0.43642):0.22400):0.38859,(Q7PX79_ANOGA/222-389:0.17674,Q7PX80_ANOGA/301-469:0.29199):1.42959):0.13600,((((Q82VZ8_NITEU/829-1008:0.56209,(((Q9A4J1_CAUCR/335-529:0.44122,(Q9A578_CAUCR/260-453:0.35080,Q7ND13_GLOVI/309-501:0.28067):0.21987):0.33928,(((Q8EDI3_SHEON/278-480:0.46312,Q8PEF6_XANCP/333-532:0.34385):0.12860,(Q8P3Z6_XANCP/298-496:0.39251,((Q8PPS0_XANAC/311-509:0.19253,Q87AH5_XYLFT/290-488:0.06836):0.17966,Q9A3U5_CAUCR/192-390:0.27931):0.06610):0.11758):0.08321,Q8EF07_SHEON/278-467:0.65417):0.12696):0.28985,Q7UGZ5_RHOBA/480-666:0.59293):0.19961):0.10718,((Q7UQS9_RHOBA/733-948:0.80108,Q8A5P9_BACTN/139-321:0.54295):0.06986,Q9YDB0_AERPE/249-412:1.48918):0.09411):0.30170,(Q8XIF2_CLOPE/231-402:0.31183,(Q97F97_CLOAB/227-398:0.31861,Q898V9_CLOTE/225-396:0.30092):0.18542):0.54545):0.13323,(O67732_AQUAE/190-352:1.02555,(((IAP_ECOLI/110-321:0.80994,Q9F3Y1_PSEAE/119-319:0.74094):0.47823,(Q9HNP7_HALN1/224-389:0.51513,Q9HRR8_HALN1/220-384:0.43303):0.54561):0.22017,(((YFI8_YEAST/119-344:0.66977,(Q7S0R5_NEUCR/126-350:0.24024,Q7SGU5_NEUCR/144-382:0.34394):0.17588):0.19545,((((Q7Q569_ANOGA/73-280:0.32098,Q9VRQ9_DROME/107-312:0.35484):0.11688,Q9VTH7_DROME/129-318:0.65111):0.06850,((Q86PD7_DROME/130-333:0.31440,Q7Q1Q7_ANOGA/145-349:0.35012):0.16162,(Q9YIB5_BOTJA/137-351:0.24788,Q9D8Y3_MOUSE/162-366:0.30949):0.12615):0.10656):0.05472,O17912_CAEEL/115-323:0.44236):0.10793):0.77761,((Q7MT37_PORGI/117-314:0.51944,Q8A4P9_BACTN/117-317:0.30073):0.21170,Q7UHT1_RHOBA/176-373:0.89115):0.68725):0.12185):0.07737):0.19947):0.06562):0.09795,Q93EJ5_BACLI/248-421:0.74236):0.13470,Q8TL26_METAC/121-299:0.59562):0.13108,((Q7RZ44_NEUCR/250-445:0.23591,APE3_YEAST/307-487:0.53055):0.16049,(Q9HZQ8_PSEAE/289-482:0.26336,((Q7U215_MYCBO/264-463:0.37601,Q53737_9ACTO/260-459:0.57611):0.10331,((Q9FBN5_STRCO/130-314:0.14556,Q8CK35_STRCO/710-894:0.14202):0.35755,(Q82DU6_STRAW/116-300:0.09417,APX_STRGR/78-262:0.15937):0.16020):0.14895):0.07043):0.09993):0.64181):0.31285,Q7RW54_NEUCR/218-393:0.76411):0.41827,O82996_AERPU/193-374:0.21694):0.18267,AMPX_VIBPR/196-377:0.08164,Q9KLD3_VIBCH/193-374:0.16640);