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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF04355 - SmpA_OmlA) |
| SmpA / OmlA family |
| (Pfam reference: accession no. PF04355) |
| (Interpro reference: accession no. IPR007450) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
18 sequences @ 117 aa (ave. pairwise identity: 0.27) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 14.78) |
| nucleotides (available for above) |
16 sequences @ 351 bp (ave. pairwise identity: 0.40) |
New Hampshire format (total tree length: 8.49) |
|
amino acids, restricted set (corresp. to available nt seqs) |
16 sequences @ 117 aa (ave. pairwise identity: 0.26) |
New Hampshire format (total tree length: 13.94) |