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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04335 phylogeny
for restricted amino acid alignment


 
((((Q9RLR6_LEGPN/49-230,(((Q981S1_RHILO/61-230,((Q9F595_AGRRH/58-225,((VIRB8_AGRT5/58-225,Q52608_9ZZZZ/51-218),O66288_9RHIZ/58-225)),(Q9PHJ3_XYLFA/53-222,Q9RND0_BARHE/29-197))),(Q9F527_ECOLI/68-239,((Q9RPX7_BRUME/62-232,(O50335_ECOLI/55-225,Q46703_ECOLI/56-228)),(Q9EUF3_ECOLI/57-235,Q9AGG9_ACTAC/48-225)))),((Q9KW40_9RICK/53-222,Q9KW47_9RICK/53-222),Y289_RICPR/72-239))),(Q9ZDP0_RICPR/72-239,(Q9KIS2_CAMJE/42-207,((O25187_HELPY/182-347,Q9ZKL4_HELPJ/120-286),((O24879_HELPY/71-238,Q9ZN26_HELPJ/71-238),Q9ZEL0_HELPY/71-238))))),Q9ZLU7_HELPJ/53-225),Q9JMX5_HELPY/53-225,O25265_HELPY/53-225);
((((Q9RLR6_LEGPN/49-230:1.03829,(((Q981S1_RHILO/61-230:1.08896,((Q9F595_AGRRH/58-225:0.13355,((VIRB8_AGRT5/58-225:0.04538,Q52608_9ZZZZ/51-218:0.04531):0.01068,O66288_9RHIZ/58-225:0.02176):0.04938):1.25221,(Q9PHJ3_XYLFA/53-222:0.46015,Q9RND0_BARHE/29-197:0.56221):0.17533):0.09477):0.17226,(Q9F527_ECOLI/68-239:0.76588,((Q9RPX7_BRUME/62-232:0.34391,(O50335_ECOLI/55-225:0.43877,Q46703_ECOLI/56-228:0.85711):0.19829):0.13721,(Q9EUF3_ECOLI/57-235:1.14156,Q9AGG9_ACTAC/48-225:0.52166):0.28328):0.16273):0.10087):0.07886,((Q9KW40_9RICK/53-222:0.08306,Q9KW47_9RICK/53-222:0.03998):0.39849,Y289_RICPR/72-239:0.88004):0.52916):0.22266):0.13791,(Q9ZDP0_RICPR/72-239:1.30196,(Q9KIS2_CAMJE/42-207:0.51210,((O25187_HELPY/182-347:0.36880,Q9ZKL4_HELPJ/120-286:0.35020):0.16659,((O24879_HELPY/71-238:0.00173,Q9ZN26_HELPJ/71-238:0.01053):0.00531,Q9ZEL0_HELPY/71-238:0.00000):0.56851):0.22601):0.70764):0.04175):1.42527,Q9ZLU7_HELPJ/53-225:0.00000):0.00000,Q9JMX5_HELPY/53-225:0.00000,O25265_HELPY/53-225:0.00000);