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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04335 phylogeny
for nucleotide alignment


 
(((((((Q9EUF3_ECOLI/57-235,Q9AGG9_ACTAC/48-225),(((Q9KW40_9RICK/53-222,Q9KW47_9RICK/53-222),Y289_RICPR/72-239),(Q9KIS2_CAMJE/42-207,((O25187_HELPY/182-347,Q9ZKL4_HELPJ/120-286),((O24879_HELPY/71-238,Q9ZEL0_HELPY/71-238),Q9ZN26_HELPJ/71-238))))),((((Q9F595_AGRRH/58-225,((Q52608_9ZZZZ/51-218,O66288_9RHIZ/58-225),VIRB8_AGRT5/58-225)),(Q981S1_RHILO/61-230,((Q46703_ECOLI/56-228,O50335_ECOLI/55-225),Q9RPX7_BRUME/62-232))),(Q9PHJ3_XYLFA/53-222,Q9RND0_BARHE/29-197)),Q9F527_ECOLI/68-239)),Q9RLR6_LEGPN/49-230),Q9ZDP0_RICPR/72-239),Q9ZLU7_HELPJ/53-225),Q9JMX5_HELPY/53-225,O25265_HELPY/53-225);
(((((((Q9EUF3_ECOLI/57-235:0.64442,Q9AGG9_ACTAC/48-225:0.46734):0.07020,(((Q9KW40_9RICK/53-222:0.04026,Q9KW47_9RICK/53-222:0.06130):0.33259,Y289_RICPR/72-239:0.48124):0.16404,(Q9KIS2_CAMJE/42-207:0.41500,((O25187_HELPY/182-347:0.25748,Q9ZKL4_HELPJ/120-286:0.26949):0.11573,((O24879_HELPY/71-238:0.01589,Q9ZEL0_HELPY/71-238:0.00437):0.01159,Q9ZN26_HELPJ/71-238:0.01257):0.46865):0.12476):0.41541):0.15280):0.13858,((((Q9F595_AGRRH/58-225:0.19343,((Q52608_9ZZZZ/51-218:0.08919,O66288_9RHIZ/58-225:0.06306):0.02825,VIRB8_AGRT5/58-225:0.02239):0.07457):0.66006,(Q981S1_RHILO/61-230:0.68489,((Q46703_ECOLI/56-228:0.55168,O50335_ECOLI/55-225:0.28836):0.12162,Q9RPX7_BRUME/62-232:0.29780):0.08133):0.09605):0.09191,(Q9PHJ3_XYLFA/53-222:0.36906,Q9RND0_BARHE/29-197:0.49106):0.19567):0.09859,Q9F527_ECOLI/68-239:0.49195):0.10409):0.07529,Q9RLR6_LEGPN/49-230:0.74520):0.05275,Q9ZDP0_RICPR/72-239:0.83879):0.80708,Q9ZLU7_HELPJ/53-225:0.00460):0.00735,Q9JMX5_HELPY/53-225:0.00200,O25265_HELPY/53-225:0.00200);