EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF04326 - AAA_4)
Divergent AAA domain
(Pfam reference: accession no. PF04326)
(Interpro reference: accession no. IPR007421)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
65 sequences @ 175 aa
(ave. pairwise identity: 0.20)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 64.25)
nucleotides
(available for above)
64 sequences @ 525 bp
(ave. pairwise identity: 0.37)
New Hampshire format
(total tree length: 36.38)
amino acids, restricted set
(corresp. to available nt seqs)
64 sequences @ 175 aa
(ave. pairwise identity: 0.20)
New Hampshire format
(total tree length: 62.64)