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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF04321 - RmlD_sub_bind)
RmlD substrate binding domain
(
Pfam
reference: accession no.
PF04321
)
(
Interpro
reference: accession no.
IPR005913
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
38 sequences @ 357 aa
(ave. pairwise identity: 0.36)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 21.97)
nucleotides
(available for above)
38 sequences @ 1071 bp
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 16.48)
amino acids, restricted set
(corresp. to available nt seqs)
38 sequences @ 357 aa
(ave. pairwise identity: 0.36)
New Hampshire format
(total tree length: 21.97)