EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF04299 - FMN_bind_2)
Putative FMN-binding domain
(Pfam reference: accession no. PF04299)
(Interpro reference: accession no. IPR007396)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
9 sequences @ 191 aa
(ave. pairwise identity: 0.34)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 6.65)
nucleotides
(available for above)
9 sequences @ 573 bp
(ave. pairwise identity: 0.46)
New Hampshire format
(total tree length: 4.35)
amino acids, restricted set
(corresp. to available nt seqs)
9 sequences @ 191 aa
(ave. pairwise identity: 0.34)
New Hampshire format
(total tree length: 6.65)