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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04285 alignment
(8 sequences with 457 aa)


Y1031_BACHD/6-385 RHNFVVSQENWTLHRKGYQDQRRHQEKVK-EAIRKNLPDLVSE-ENIIMSNGREVIKIPIRSLDEYKIRYNY--DKNKHVGQGDG-----DSQVGDVIARDPSAGQ-QGPGKGQGAGDQPG-------EDYFEAEVSILELEELLFRELELPNLQQKEEDHLVV-EHIEFND-IRKKGLMGNIDKRRTILSAIKRNALEGRP------G-------------------------------LIP------IYNDDLRFKTWNEVVRPESKAVVLAMMDTSGSMGRWEKYMARSFFFWMTRFLRTKYETVDIEFIAHHTEAKVVSEEDFFSKGESGGTICSSAYRKALELINEKYDPARYNIYPFHFSDGDNLTSDNARCLKLVH-ELMESSSMFGYGEVN---QYSRHST-----------LMNAYKNLKDPRFRSYVLKEKGDVYRAMKTFFKKEEE
YHBH_BACSU/6-385 SGHFLISEENWSLHRKGFDDQQRHQKKVQ-EAIKNNLPDLVTE-ESIIMSNGKDVVKIPIRSLDEYKIRYNY--DKNKHVGQGDG-----ESQVGDVVARDGSDKK-QGPGKGQGAGDQAG-------EDYYEAEVSLMDLEEALFKELELPNLQQKERDNIIH-TDIEFND-IRKTGLTGNIDKKRTMMSAFKRNAMSGKP------S-------------------------------FYP------IYPEDLKYKTWNDITKPESKAVVLAMMDTSGSMGVWEKYMARSFFFWMTRFLRTKYETVEIEFIAHHTEARVVSEEDFFSKGESGGTICSSVYRKSLELIDEKYNPARYNIYPFHFSDGDNLTSDNARCVKLVN-DIMKKANLFCYGEVN---QYNRHST-----------LMSAYKNVKDEKFKYYILKQKSDVFQALKNFFRNEES
Y580_CLOAB/1-390 MAIFRDYSINPTEHDRTIGDRRRHRELVE-KAIKDNLADIVSE-ESIIGESKSKKIKIPIRGLKEYKFLYGN---NSSSVGSGTG-----NEKKGDIIGKEQMGNG--SKGKGKGAGNSEG-------EDIYETEVTIEEVFSYLLEDLNLPNLDKKKYSEIVTDSSKKKAG-YQKYGIRPRLAKKRTVIEKIKREQSRKRA----IKE---------------LGKD-------------DKVERLP-FSEEDLRYHRIKEKPKKECNAAIMCVMDCSGSMDSTKKYLARSFFFILSKFIRMKYVNVEIAFISHSTVGREVTETEFFHKVESGGTYISSGLNTAMDIIKERFNPATWNIYGFYVSDGDNFTEDDERAIKSMR-KFCEIANMIGYAEIL----PYSYSG---------TMKYKFDNYVKDKNFISSTIRNKEDLWPVLKKMLIKELK
Y587_PSEAE/1-422 MSYVIDRRLNG--KNKSTVNRQRFLRRYR-EHIKKAVEEAVSR-RSITDMEHGEQISIPGRDIDEPVLHHGR-GGRQTVVHPGNK-----EFTAGEHIARPSGGGG--GRGGGKASNSGEG-------MDDFVFQITQEEFLDFMFEDLELPNLVKRHITGTDT-FKTVRAG-ISNDGNPSRINIVRTLRSAHARRIALSGGSRAKLRAALKELERIKREEPDNLGDI--QELELEIAKLRARIDRVPFLDTFDLKYNLLVKQPNPTSKAVMFCLMDVSGSMTQATKDIAKRFFILLYLFLKRNYEKIEVVFIRHHTSAREVDEEEFFYSRETGGTIVSSALKMMQEIMAERYPTHEWNIYAAQASDGDNWNDDSPVCRDILLKQIMPFVQYYTYVEIT----PREHQA--------LWFEYERVREAFEDSFAQQQIVSASDIYPVFRELFQRRLV
YEAH_ECOLI/1-423 MTWFIDRRLNG--KNKSMVNRQRFLRRYK-AQIKQSISEAINK-RSVTDVDSGESVSIPTEDISEPMFHQGR-GGLRHRVHPGND-----HFVQNDRIERPQGGGGGSGSGQGQASQDGEG-------QDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTE-YKTHRAG-YTANGVPANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEE--ERLRKEIAELRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNPAQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEIT----RRAHQT--------LWREYEHLQSTFDN-FAMQHIRDQDDIYPVFRELFHKQNA
Y1873_VIBCH/1-423 MAQFIDRRLNG--KNKSTVNRQRFLRRYK-EQIKESVADAVNR-RSITNTESGEDVSIPTRDIKEPMFHQGK-GGVRERVHPGND-----QFIRGDKIDRPKGGQGSGGSGEGEASADGEG-------SDDFVFQISKDEYLDILFEDLALPNLKKNQVNKITE-WKTHRAG-FQTSGVPSNISVVRSLQQSLARRTAMTAGKRRLMSELEEELERIQRSEPPQIMEE--MRIKQEIEELRNKIDSVPFIDTFDLRFKNYEKRPIPSSQAVMFCLMDVSGSMDQATKDIAKRFYVLLYLFLTRTYENVEVVFIRHHTQAKEVNEHDFFYSQETGGTIVSSALKLMHEIIEARYPLGEWNIYGAQASDGDNWADDSPRCKELLSNKLLPYCQYYAYIEIT----RRSHQT--------LWHEYEKLQASFDN-FAMKNIRSVEDIFPVFRELFQKENA
Y9637_RHILO/1-431 MPIFIDRRLNP--KDKSLGNRQRFLRRAR-EELKRSIRDKVRA-GGIAELDREHVVPIPRKGTGEPTFGDDKESGRRQHILPGNR-----TFSSGDLIPKPGGGGG-----YGSAAGTTES-------EDDFRFVLSREEVLDLFFEDLELPDLVKLNLKQVLS-FKPRRAG-FAASGAPTNINVGRTMRNSHGRRIALRRPKQAELDAIARQIAELEAKPASALVRERIAALREALDRLERRRKRIAYVDPVDIRFNRFDPQPLPNANAVMFCLMDVSGSMGEREKDLAKRFFVLLHLFLTRRYERTDIVFIRHTHLAKEVDEHTFFYHTESGGTVVSTALEEMHRIIEQRYPVAEWNIYAAQASDGDNFAGDSERCIELLDRKLMRLCQYFAYVEIID--ERESHIFGATENGTSLWRAYNAVDGKWPN-FQMRRIAAPADIYPVFRQLFARQPD
Y746_HALN1/1-439 MGLKEDRERFH---EIGEQRRQDLAEFIQYGDLGGSGPDAVRVPIKLVDLPAFEYDQLDRGGVGQGDVDPGDQVGEPDEAGEGDDDEAGDESADHEYYEMDPEEFAAELDERLGLDLDPKGKKVVAETEGAFNETARRGPRGTLDFAHLYKQGLKRKIAMDFDE-AYVTAALRVDGWGVDAVYTWAREQHIPVSRAWIAERARSPSPDDDAGRVVDDAVWASIDAMEAAVDVEPTRTRIRRGGPGRVP-LRREDERFRHPKVVEHRERNVVVVNIRDVSGSMRESKRELVERTFTPLDWYLTGKYDNAEFVYIAHDADAWEVDRTDFFGIQSGGGTRISTAYELAENVLDE-YPFSEWNRYVFAAGDGENSHDDTEENVIPLMNDIDANLHAYVETQPTDGVQTGTHAG-----------KVRDAFGDTDN-VAVTTVTEPDDVMGAIETILSTEDN