EMBL-EBI
>
Goldman Group
PANDIT Home
|
Browse PANDIT
|
Help on PANDIT
|
Release notes
|
Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF04230 - PS_pyruv_trans)
Polysaccharide pyruvyl transferase
(
Pfam
reference: accession no.
PF04230
)
(
Interpro
reference: accession no.
IPR007345
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
23 sequences @ 450 aa
(ave. pairwise identity: 0.17)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 31.05)
nucleotides
(available for above)
23 sequences @ 1350 bp
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 16.01)
amino acids, restricted set
(corresp. to available nt seqs)
23 sequences @ 450 aa
(ave. pairwise identity: 0.17)
New Hampshire format
(total tree length: 31.05)