EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04229 alignment
(10 sequences with 729 bp)


COAE_MYCLE/185-399 CGG---GCTCGTGACCTATGGTACCATCGCATATTGCCGTTCGCCTACAACCTGAGTCAGCGT......CAGGCGGTC------TATGCACCGGCAGGTTTGGTCACGTCTGATCCG...ATCTGGCTGGGGCAGGCGAAGCGCATTGTTGCTCGGCTGAAGACCACGTGTGGCCATAAGGCGTTACGCGTTGACCACATCGGCTCGACCGCGGTGCCGcattatccaGGTTTTCCTGATTTTCAGGCCAAAGACATCATCGACATTCAGATCACCGTCGAGTCACTAGCGATGGCTGACGAACTCGCCGACCCT---CTGTTGTCTGCCGGG---TACCCGCGCctggagcacgtcaccggtgatgccgccaagaccaatgcccgcagcaccgtaGATCGCTACGAACACAGTAGCGACCCAAAT---TTATGGCACAAGAGG---TTTCATGCCTCTGCAGACCCCGGT............---CGACCGACATACGTG.................................CATATCCGGGTG------GCTGGCTGGCCGAATCAGCAATTCGGTTTGCTGTTCGTCGACTGGTTGAAAGCTAACCCGGGTGTGCGTGCCGACTACTTGGACGTCAAACGCACGGCGGACCGGCTGGCGGCCGGAGACATGGGCCGTTACGCCGACGCGAAGGAACCATGGCTCCTCGACGCCTACCGGCGAGCG
COAE_MYCTU/184-396 CGGCGGGCCCGCGACGTCTGGAACACGCGCGTCCAGCCCTTCGCGCACAACCTGGCCCAACGT......CAGATTGCG------CGCGCGCCGGCTAGGTTGGTGCCGGCGGATCCA...AGCTGGCCGGATCAGGCGCGGCGCATCGTCAACCGGCTAAAGATCGCGTGCGGGCATAAGGCCTTGCGAGTTGACCACATTGGGTCAACCGCCGTGTCG.........GGCTTCCCCGATTTTCTAGCCAAGGATGTCATCGACATCCAGGTCACCGTCGAATCACTTGACGTGGCCGACGAGCTGGCCGAGCCC---TTGCTGGCCGCCGGC---TACCCACGC...................................................CTCGAGCACATCACCCAGGACACCGAAAAGACCGACGCTCGCAGCACC---GTCGGCCGCTACGACCACACCGACagtgccgctctgTGGCACAAGCGCGTGCACgcctcggcggatcccggtcggccgaccaacgtgCACCTGCGGGTG------CACGGCTGGCCCAACCAACAGTTCGCCCTGCTGTTCGTCGACTGGCTGGCGGCCAATCCCGGCGCGAGAGAAGACTATTTGACGGTCAAGTGTGACGCCGACAGGCGCGCCGACGGTGAGCTCGCGCGCTACGTCACCGCCAAGGAGCCGTGGTTCCTGGATGCCTACCAGCGGGCA
Y2534_DEIRA/3-185 CGCGGGGGGCGCGGCGTGGGGGGCGGGCGTCCAGAGGGTCATGGGGCGAGTGTAGAGGGTGGC......CGCACCCGT---CAGACTGAAGGCATGGACCTCATCTCGCCTGACCCCggaCGTTGGGCCGCCCGGTTCGACCGGCATCGGTGGCGAATTCGA------CTCGCTCTTCCCCAGGCCCGCACCGAACACATCGGCAGTACAGCCATC---.........------GGCACCATTTGCGCTAAAGATGTGGTGGACATTCTGGTCGGT---------GAAGTAGACGTGACGGCGGCGGCGCAGGCG---CTCGTAAGTGCCGGA---TAT------...................................................------GTCATCGAGGGCGAGCGGCCCAAC---------CACATCTGG---CTGTGCTGGCCGGACCCGCAACAG............---CGCGAAGCGGTAGTG.................................CATGTGGTCATT------GCGGGGGGCGACATCTGGCACCAACGGCTGCTTTTCCGTGATTTCCTGAAGCGCAGTCCTGCCGAGGCCCGGGCTTACGAAGCGCTCAAACAGAGGCTGGCGGCCCAGACC---GACGACTGGGGCGAGTACACCGCGCAGAAAGCCGCTTTCGTCGCCCGAATCCTGCAAAGGGCA
YZZE_STRCO/1-181 ATG---ACGAACAGCAGCGGGCGACGTCGGCCGGACGTCACGACGGTCGAGATCATCGGTGGGccggaaGCGCTCGAG---------------ATCGGGCTCAGCGACTACGACGCC...CGGTGGGCGGAGACCTACCTGCGTCACCGGCGTCGGATCCTCGACGCGTTGGGGGCC---GACGTCGATGTCGAGCACATCGGCTCCACTTCGGTT---.........------CCGGGTCTGGCCGCCAAGCCGATCGTGGACATCGTCGTCGCGGTGGCGGACATCACGTCGGAGGAGGACTACCTCGACGCA---CTGTTGGCGGCCGGG---TAC------...................................................------GAACTGCGGGTTCGCGAGCCAGGA---------CATCGACTC---GTGCGCACA---CCCGGTCGCGAC............---------------GTG.................................CATGTACACGTCTACGAGAGAGGGGCCGCGGCGGTGCACGAGTACCTCCTCTTCCGTGACCACCTGCGCGCGGACGCGGACGATCGCGCCCTGTACGAGAACGTCAAACGAGCCCTGTTCGAGCAGCCGTGGAACGACATGAACGACTACTCCGACGCCAAGAGCGACGTCATCCTCGCGATCAAGTCCCGAGCC
Y1888_BACHD/4-192 ATGAAGGATAGTTCAAATTCAACGCCTAGAACTGATGAAGAACTCCAAGAGGTTACGGTTGGA......GAGCTTAAGCCTCATAATGCCTCCATTACTCTCTTGGAATATGATCCA...CGTTGGCCTAAACTATTCGACCGAGAAGCTAAACGAATACGTTCAGTACTTGGCAACAAGGCATTACAAGTGGAACACGTAGGATCAACTTCAGTG---.........------CCGGGACTGTGTGCTAAGCCCATCATTGATATCCTACTCGTTGTGACTGATTCTGCTGACGAAACGACCTATGTTCCCGAC---TTAGAGAAAGTCGGC---TAT------...................................................------ACGTTACGTATTCGTGAACCTGATTGGTTTGAGCATCGTGTT---TTCAAGGGA---CCTGATACAGAC............---ATCAAC------CTA.................................CACGTATTCAGC------AAAGGAACATCCGAGATTGACCGAATGTTGCGCTTCCGAGATTGGTTACGGGCCAACAATTCAGACCGGGACAACTACGCTCGTGTTAAACGCAAACTTGCTCAGCATGAATGGCGACAAGTGCAACACTACGCAGATGCTAAAAGCTCGATTGTCCAAGAAATCATGAAGCGAGCA
Y4798_PSEAE/1-184 ATG------TCCTCACCCCAACCGCCCCGCTTCGACGGC------CAACGCTGGAGCAAC---......---GCCGAC------GACGACCGCATCGAGGTGCTGCCTGCCGACCCC...GCCTGGCCACAACACTTCGCCGCCGAAGCCGAGGCCATCCGCACGGCGCTGGCGCTGCCCGGGCTGGGCATCGAGCATGTCGGCAGCACCGCGGTG---.........------CCCGGGCTCGACGCCAAGCCGATCATCGACATCCTCCTGCTGCCGCCGCCCGGCCACGATCCGCAGCGGCTGGTAGCCCCG---CTGGAGGGCCTCGGC---TAC------...................................................------CAGTTCTGGCGCGAGAACCCGAACACCCAGCGGATGTTCTTC---GTCAAAGGCATGCCGCCCTTCGGC............---CATGGCCGCACCCAC.................................CATGTCCATGTC------ATGCCCCTGGCCCAGGCCGACCGCTACCTGCTGTTCCGCGACTGGCTGCGCAACCACCCCGACGACGCCCGCCTCTACGCCGAAACCAAGCACGCCCTGGCCCGCCGCTACCCCACCGACCGCGAGGCCTATACCCGTGGCAAGGACGAGGTCGTCGCAAGGATTCTCGGCCGGGCG
YQKA_BACSU/136-314 ---------AAAGCAGCGCAGGGTCTATTGCTGTCGGTCTTTCATTTGTATCCGAAAAGA---......------AAA---------------GTTGAGATCATTCTCTACAACGAA...AAATGGGCAGAATGTTTCGATGAAGAAAAAGAACGGCTGAAACTTGTGTTCGGGCCGGAGATTATCGCTATTCATCACATCGGAAGCACATCAATA---.........------CCTAACATGGCAGCGAAGCCAATCATTGATATGTTAATTGAAGTCAGAAGCATTGAAGCCGTGAGCCAATTTGATGAACAA---ATGAAGGCCAACGGC---TAT------...................................................------ACACCAAAAGGTGAGAACGGTATAGCGGGCAGGCGTTATTTC---CAAAAGGGC------------GGA............---AATAAACGCACTCAT.................................CATGTCCATATGTACGAACAGGGAAACCCTGCTATTGAAAGGCATCTGTTATTCAGAGATTATCTCAGAGCTCATCCAAACATAGCGAAAGAATACGCCGTTCTCAAAAAACAGCTGGCGGCCCAGCACCCTGACAGCATCAATCAGTATATACAAGGGAAAGATGAGTGGATCAAGACTGCAGAAGAAAATGCG
GRPB_BACPF/1-174 ATG---------------------TTAGGGGTTAACAAA---------------------GGT......GAAGTGATT---------------------TTAGTTACTCATTCTGAA...AATTGGAAGAGGTTATTTCATAAAGAAAAATCTTTATTGGAGACGATTATTGGGGAACAGGTAAAGGATATTCAACAATTTGGCAGTACAGCAATC---.........------AAGGGCATTGAAGCAAAACCTATTATTGATATATTGGTTGGTGTAGAGTCATTAAAGGATGTTGAAAAGTTTAATAATGAAAGATTAAAAGAAGCTGGATATTAT------...................................................------CATTTATCCAGAGTTCAAATTGATGGAAAAGAGGTTTTTGCTAAGTTTACTGACTTAGAAAACCTAACC............---AAGACACATATTCTT.................................CACGTTGTTGAA------TATCAAGGTGATTGGTGGAACGAACACATTTCATTCAGAGATTATTTAAATGCAAATCCATTAGTTTCTAAGGAATATGAGTCACTCAAGAAAAATCTAGCAGAAAAATACCCTAACGATGAACATTCATATACAAATGAAAAGACCCAGTTTGTTGATGAAATTTTGAATGAAATG
Q99VN5_STAAM/1-171 ATG---TATTCAAATGTTCAACCATTCATTAATAGTGAT------------TTAACTAAT---......------TGT---------------------------------------...---TTTCAATCACAATACACTGAAATTGAATCATTATTATTCAACCTCTTAGACAGCCCAGTAAAATATACAAAACATATTGGCGGTACGCATCAT---.........------TTTAAATATTCAACAGAGCCAATTTTAGATATTTTAGTAGGTGTAGAAAATTTGCATGATATTACATCCTTAGATGAAAAACGCTTAAATTATGTAGGGTTTTAT------...................................................------CGTTTGCATCATAAATATACTAAG---AAAGTTATGATGGCGAAGTTTAACAATTTTCATGAACTAAAA............---CAACAGGTGCGTCTA.................................CATATCATTCAA------ATGAATACCCAAACATTTGAATCTTATCTTGCA---CTTGATTACCTCTTATCAACTAATGATGATATTGCTTTGCAATTCAATACAAAAAAGCACCAAATATTGCAACATAGCTTAACAATTAGACAATATGAGATGCAAAAGCAACAATACTTTGAAAAACTATGTAAAAAATAC
Y3154_VIBCH/3-188 CGCGGTGGTTTCGGTGGTTTGTGTTTGGGTTTGGTTGTTATGCGTTGTCAGCCCCTTAGGCGG......GCGTTATGCCTTTTGGGAGACAATATGCAGTTTTACAAAGCAGATGAAtatCAGGCATCTTGTGAAAACCTGTATCGTAAGTACGAACTTGAGATAGCTGCTTTACTTCCAGATGCATCTATTGAGCATATTGGAACTTCCTCTATT---.........------CCTAATGCTGTATCTAAAGGTGACCTAGACATACTTGTTGGT---GTTAACGGCAAGGAACTAGAAAATGCAGTAAAGTTA---CTTTCTACTCTAGGT---TTC------...................................................------AACGAAAAATCCGATACGTTAAGA---------ACTCCGGAG---CTTTGCATGCTGGAAAATAGCTCA............---GGTGAGGATGTCGCT.................................TTTCAAGTTGTA------GCTAATGGTTCGGAATTTGAGTTTTTTGTGGGGTTTAGAGACAAACTCCGTAAAAATCCTGAGTTAGTTCAACGATACAATGAGCTGAAAATATCTTGTACAGGTTGGTCT---------CACGAAGAGTATCGTCGGAAAAAATCAGCTTTTATTGAGCGCGTGTTAGGGCAGGCA