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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04205 phylogeny
for amino acid alignment


 
((((((((((((((Q88SE0_LACPL/12-86,((Q894P7_CLOTE/34-108,Q897C9_CLOTE/46-120),((Q8DW88_STRMU/201-275,Q88X25_LACPL/201-275),Q8CQD4_STAEP/399-473))),((Q8RH60_FUSNN/18-94,Q893H7_CLOTE/38-111),Q8CVD0_SHEON/36-110)),(Q8EH12_SHEON/47-121,Q894M0_CLOTE/38-113)),((Y572_TREPA/284-358,Q97FH6_CLOAB/310-384),((Q88Y43_LACPL/548-622,Q890G6_LACPL/709-783),Q8RPI7_DESHA/57-130))),((Q8RDZ0_FUSNN/55-138,(TA15_TREPA/36-130,((Q8XI95_CLOPE/45-136,((Q8Y436_LISMO/69-160,Q8Y436_LISMO/189-282),((Q8RP94_ENTFA/75-166,Q8RP94_ENTFA/197-293),(Q88XV4_LACPL/74-169,Q88XV4_LACPL/198-291)))),Q8R7D5_THETN/46-137))),(Q97FH2_CLOAB/56-130,(Q988S1_RHILO/200-278,(Q82L19_STRAW/64-137,(Q827Z8_STRAW/85-163,((Q828A0_STRAW/73-150,Q9L1A7_STRCO/24-101),Q9L1A7_STRCO/143-220))))))),(Q8RFN5_FUSNN/43-122,Q8RFN6_FUSNN/27-108)),(((Q7MXA3_PORGI/87-182,Q8AA45_BACTN/91-195),(Q8RIJ7_FUSNN/90-171,((Q8XLH9_CLOPE/90-180,(Q897Q6_CLOTE/92-181,Q897Q6_CLOTE/244-333)),Q896I3_CLOTE/92-181))),(Q8TSY2_METAC/97-183,((Q7MT19_PORGI/136-234,Q8A8K9_BACTN/123-220),(((NQRC_HAEIN/133-230,((Q8EID8_SHEON/144-242,(Q8EHV7_SHEON/149-247,((Q82SE5_NITEU/149-250,NQRC_PSEAE/146-247),Q7UWS3_RHOBA/157-255))),((NQRC_VIBVU/142-240,NQRC_YERPE/151-249),Q7N7F2_PHOLL/150-248))),(NQRC_PASMU/146-243,(Q7VNU7_HAEDU/144-241,NQRC_NEIMA/146-243))),(NQRC_CHLTR/184-297,(NQRC_CHLCV/187-300,NQRC_CHLPN/189-302))))))),((((Q7UN50_RHOBA/114-200,Q7UN50_RHOBA/256-340),Q7MUA8_PORGI/95-176),((((Q8RPG1_DESHA/73-156,Q8RPI8_DESHA/73-156),Q8RPJ7_DESHA/89-173),Q8RPJ9_DESHA/72-155),(O67302_AQUAE/97-176,(Q8XRW1_RALSO/97-179,Q8Y1S9_RALSO/85-166)))),(Q88NW0_PSEPK/98-186,((RNFG_PSEST/122-214,Q9F5Y2_AZOVI/1-82),((((Q7VNT2_HAEDU/100-192,(RNFG_HAEIN/100-192,RNFG_PASMU/102-194)),(Q8FH93_ECOL6/99-191,(Q7N4F7_PHOLL/100-192,RNFG_YERPE/100-192))),(((RNFG_BUCAP/101-193,RNFG_BUCAI/50-142),RNFG_BUCBP/105-198),(Q8EE77_SHEON/101-193,(Q7MM85_VIBVY/100-192,RNFG_VIBCH/100-192)))),(RNFG_RHOCA/110-202,RNFG_PSEAE/105-197)))))),Q8XLH9_CLOPE/241-339),Q8XQB7_RALSO/101-195),(((O68483_RHIME/89-178,Q8FX17_BRUSU/110-199),Q89XJ7_BRAJA/91-180),((O68476_ACHCY/90-179,Q9R9K9_PARDE/78-167),O33432_PARDE/86-173))),NOSR_PSEST/87-180),NSR1_PSEAE/82-175),Q9F0W5_PSEFL/85-178,Q8L1B8_9PSED/86-179);
((((((((((((((Q88SE0_LACPL/12-86:0.63459,((Q894P7_CLOTE/34-108:0.11647,Q897C9_CLOTE/46-120:0.22322):0.19710,((Q8DW88_STRMU/201-275:0.19723,Q88X25_LACPL/201-275:0.18795):0.09376,Q8CQD4_STAEP/399-473:0.27537):0.39709):0.05301):0.07553,((Q8RH60_FUSNN/18-94:0.70153,Q893H7_CLOTE/38-111:0.29186):0.19608,Q8CVD0_SHEON/36-110:0.63758):0.14480):0.09164,(Q8EH12_SHEON/47-121:0.75432,Q894M0_CLOTE/38-113:0.18028):0.21361):0.08127,((Y572_TREPA/284-358:0.73841,Q97FH6_CLOAB/310-384:0.44383):0.10147,((Q88Y43_LACPL/548-622:0.35579,Q890G6_LACPL/709-783:0.25861):0.17702,Q8RPI7_DESHA/57-130:0.62470):0.20129):0.09806):0.09599,((Q8RDZ0_FUSNN/55-138:0.86971,(TA15_TREPA/36-130:0.92101,((Q8XI95_CLOPE/45-136:0.45993,((Q8Y436_LISMO/69-160:0.29356,Q8Y436_LISMO/189-282:0.24788):0.06956,((Q8RP94_ENTFA/75-166:0.18082,Q8RP94_ENTFA/197-293:0.20467):0.13874,(Q88XV4_LACPL/74-169:0.33465,Q88XV4_LACPL/198-291:0.19435):0.20347):0.05775):0.29019):0.13226,Q8R7D5_THETN/46-137:0.24806):0.14397):0.31941):0.19741,(Q97FH2_CLOAB/56-130:0.75872,(Q988S1_RHILO/200-278:0.45444,(Q82L19_STRAW/64-137:0.43064,(Q827Z8_STRAW/85-163:0.37044,((Q828A0_STRAW/73-150:0.16619,Q9L1A7_STRCO/24-101:0.15806):0.07877,Q9L1A7_STRCO/143-220:0.20443):0.07937):0.15340):0.22213):0.23647):0.14067):0.11129):0.11979,(Q8RFN5_FUSNN/43-122:0.48254,Q8RFN6_FUSNN/27-108:0.21196):0.62805):0.45264,(((Q7MXA3_PORGI/87-182:0.29420,Q8AA45_BACTN/91-195:0.43611):0.59883,(Q8RIJ7_FUSNN/90-171:0.79619,((Q8XLH9_CLOPE/90-180:0.37259,(Q897Q6_CLOTE/92-181:0.39286,Q897Q6_CLOTE/244-333:0.48762):0.19510):0.18190,Q896I3_CLOTE/92-181:0.31815):0.12837):0.06894):0.06278,(Q8TSY2_METAC/97-183:0.52654,((Q7MT19_PORGI/136-234:0.30779,Q8A8K9_BACTN/123-220:0.45857):0.17643,(((NQRC_HAEIN/133-230:0.25791,((Q8EID8_SHEON/144-242:0.63303,(Q8EHV7_SHEON/149-247:0.31617,((Q82SE5_NITEU/149-250:0.39725,NQRC_PSEAE/146-247:0.22995):0.09482,Q7UWS3_RHOBA/157-255:0.38196):0.14613):0.10639):0.04672,((NQRC_VIBVU/142-240:0.19908,NQRC_YERPE/151-249:0.28033):0.03013,Q7N7F2_PHOLL/150-248:0.27746):0.05912):0.09445):0.06187,(NQRC_PASMU/146-243:0.22505,(Q7VNU7_HAEDU/144-241:0.09236,NQRC_NEIMA/146-243:0.21981):0.05854):0.08929):0.43208,(NQRC_CHLTR/184-297:0.02630,(NQRC_CHLCV/187-300:0.05988,NQRC_CHLPN/189-302:0.14160):0.15252):0.28674):0.29360):0.51677):0.32604):0.11347):0.10986,((((Q7UN50_RHOBA/114-200:0.69420,Q7UN50_RHOBA/256-340:0.57355):0.57931,Q7MUA8_PORGI/95-176:0.51405):0.19045,((((Q8RPG1_DESHA/73-156:0.17603,Q8RPI8_DESHA/73-156:0.27063):0.21019,Q8RPJ7_DESHA/89-173:0.56530):0.15418,Q8RPJ9_DESHA/72-155:0.37472):0.32448,(O67302_AQUAE/97-176:0.77501,(Q8XRW1_RALSO/97-179:0.51982,Q8Y1S9_RALSO/85-166:0.20213):0.28399):0.45734):0.25164):0.21731,(Q88NW0_PSEPK/98-186:0.69846,((RNFG_PSEST/122-214:0.03526,Q9F5Y2_AZOVI/1-82:0.18803):0.31092,((((Q7VNT2_HAEDU/100-192:0.35103,(RNFG_HAEIN/100-192:0.25118,RNFG_PASMU/102-194:0.13969):0.10292):0.06205,(Q8FH93_ECOL6/99-191:0.11013,(Q7N4F7_PHOLL/100-192:0.11654,RNFG_YERPE/100-192:0.17047):0.04964):0.17206):0.03813,(((RNFG_BUCAP/101-193:0.15242,RNFG_BUCAI/50-142:0.12056):0.13276,RNFG_BUCBP/105-198:0.29231):0.41519,(Q8EE77_SHEON/101-193:0.26474,(Q7MM85_VIBVY/100-192:0.20537,RNFG_VIBCH/100-192:0.19941):0.07113):0.03654):0.09475):0.24015,(RNFG_RHOCA/110-202:0.35411,RNFG_PSEAE/105-197:0.25100):0.04169):0.10937):0.16152):0.22905):0.01643):0.35494,Q8XLH9_CLOPE/241-339:0.67452):0.55221,Q8XQB7_RALSO/101-195:0.37796):0.16670,(((O68483_RHIME/89-178:0.04758,Q8FX17_BRUSU/110-199:0.26976):0.16023,Q89XJ7_BRAJA/91-180:0.18699):0.19448,((O68476_ACHCY/90-179:0.15809,Q9R9K9_PARDE/78-167:0.12259):0.13586,O33432_PARDE/86-173:0.67629):0.18527):0.45874):0.31617,NOSR_PSEST/87-180:0.13136):0.03825,NSR1_PSEAE/82-175:0.09048):0.03524,Q9F0W5_PSEFL/85-178:0.15379,Q8L1B8_9PSED/86-179:0.12303);