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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF04203 alignment |
| YHCS_BACSU/75-197 | TTAGAAATACCGAAAATCAATGCA...GAGCTTCCGATCGTGGAGGGC---ACCGATGCTGATGATTTAGAAAAAGGTGTC---.....................GGGCATTACAAGGAC---------AGCTATTATCCT------GATGAAAACGGACAAATTGTGCTGTCAGGGCATCGG------------------------GATACCGTGTTTCGCCGGACGGGAGAGCTGGAAAAGGGGGATCAGCTCCGTCTTCTCCTGTCATATGGAGAATTCACA---TATGAAATTGTAAAAACA---AAAATTGTCGATAAGGATGACACATCTATTATCACGCTCCAGCAT---GAAAAGGAA---------------------GAGCTGATTCTGACGACCTGCTATCCGTTTtcaTACGTCGGAAATGCCCCGAAGCGCTATATTATATATGGAAAACGAGTG |
| Q9K6X8_BACHD/63-185 | CTGGAGATCACGAAGCTAGAGGCA...GAGCTACCGATCGTTTCCGGA---ACCGATGAAGACGAACTCGATCGGGGGGTC---.....................GGTCATTATACAAGC---------ACCGTCCTGCCA------GGGCAAAACGACCAGATCTTACTATCAGGTCATCGC------------------------GATACCGTTTTTCGCGATATGGGAAAATTGGAAATAGGGGATGACTTGACCGTCCATATGCCTTACGGAAGTTACACG---TATCGGATTGTTGATACG---GAGATTGTCGATGCTAATGATACATCGGTTATACGTTCGACGGCC---CCAGACGAA---------------------GTGCTGACCCTCTCGACATGCTACCCTTTCaatTTCATAGGGAGTGCGCCCGAACGATATATTATTTACGCCGAGCCGTAC |
| Q9K5S8_BACHD/75-196 | CTATACATTCCGAAGCTGGAAGCC...ACCCTTCCGATTTATCACGGA---ACCGATGAGGATGAACTGGAGCGCGGCGTG---.....................GGCCATTTCGCGAAC---------AGCGTCCTGCCA------GGGGAAGAGGACAATTCGGTGCTATCTGGGCACCGC------------------------GACACCGTCTTCCGCGAGCTTGGCGAGGTCGGCGTCGGTGACCTGCTCATCGTCGAAACCGCGACCGGCACCCATACG---TACCGCGTGCGTAAGGTG---CGGATCGTGGACGAGGATGACCGAACCGTCATC---GTACCAAAG---CCGCGGGCC---------------------ACGCTCACCGTGTCAACCTGCTATCCGTTCgacTTTATCGGCTCTGCACCAGAGCGTTACATTTTAGAAGCAACGCTCATT |
| Q9KB09_BACHD/67-190 | TTAGAGATCGAGAAAATTTCTTTA...AAGCTCCCAGTCTTACAAGGT---GTTGATCAAGAGACGTTAAAAGTTGGGGCC---.....................GGCCATATGATTGAG---------TCATCACCAATC------GGAGAAAAAGGGAACGCAGCGATCGCCGCTCACCGA------------AGTCGAACATACGGTAGGCAATTTAATCGGCTCGATGAAGTCGAAGTAGGGGATGTCATTACCGTCACAACGAATAATCACATGTATCGA---TATACGGTTTACAGTATA---ACAGTTGTTGAACCTACGAATATCGACATTTTACAACATGACGGA---ACAGCTCCA---------------------GTACTTACGCTCATTACGTGTGATCCT---...---GTGAAAGATCCGACCCATCGCCTAATTGTACAAGCCGAGATGACC |
| Q97MJ2_CLOAB/72-194 | TTAAAAATTCCTAAAATAGACTTA...AAGGTTGCGATAGGAGAAGGC---ACTGACCTTAAAACACTGAAATATGCAGTA---.....................GGACACTTCAGGAAT---------ACCTCTATGCCT------GGACAGAACGGCAATTTTTGCCTTGCTGGTCACAGA------------AGTTATACTTTTGGTGAGTACTTTAACAGATTAGGTGAAATAGGCTCCGGTGATGAAATTGATGTAGAAACTGTGAATGGCACTTTTAAG---TACAAGGTTTACAGTACT---AAGGTAGTTCTTCCTAGTGAAGTTCATGTACTGGATCAGACTAAAGATCCA---------------------------ACTATGACCTTAGTTACCTGTACTCCT---...---ATAAGAATAGCTACTCATAGACTTATTATAAAAGCTAAAAGAATT |
| Q9AJ92_ACTVI/151-276 | ATCGTCATCCCCTCCATCCACGTG...AGCCTGCCCGTCTACCACGGC---ACCGACACCCGCACTCTGGCCAACGGCGTC---.....................GGACACCTGTTCGGC---------ACCAGCCTGCCGATCGGGGGGCCCTCCACCCACGCCGTCCTGACCGGTCACACC------------GGGCTGCCCACCGCGACGATGTTCGACAACCTCAACCAGGTCAAGAAGGGAGACGCCTTCTACGTCTCCTCCCTGGGGCAGACCCTCAAG---TACGAGGTCGTTGACATC---ACCGTCGTCACGCCCGAGGAGACCGACTCCTTGCGCAAGGTCCCG---GGGCGCGAC---------------------CTGGTCACGCTCATCACCTGCACGCCC---...---TACGGCGTCAACTCCCACCGCCTGCTGGTCACCGGTGAGCGCGTT |
| O68213_ACTNA/91-216 | CTCAAGATCCCCTCCATCTCCCTG...GACCTGCCCGTCTACCACGGC---ACGGCCGACGACACCCTGCTCAAGGGCCTG---.....................GGGCACCTGGAGGGC---------ACCTCGTTGCCGGTCGGGGGAGAGGGGACCCGCTCGGTCATCACCGGGCACCGA------------GGTCTGGCCGAGGCCACCATGTTCACCAACTTGGACAAGGTCAAGACCGGTGACAGCCTCATCGTCGAGGTCTTCGGAGAGGTCCTCACC---TACCGGGTCACCAGTACC---AAGGTCGTCGAGCCCGAGGAGACCGAGGCCCTGCGCGTCGAGGAG---GGCAAGGAC---------------------CTGCTCACCCTGGTGACCTGCACGCCC---...---CTGGGCATCAACACCCACCGCATCCTGCTGACCGGTGAGCGCATC |
| Q9A1R7_STRPY/74-199 | GTTGAAGTGCCCTCTATTAAAGTG...ACGTTACCCATATACCACTAT---ACGACAGACGAGGTGCTAACTAAAGGAGCA---.....................GGTCACTTATTTGGA---------AGTGCCTTACCAGTTGGTGGTGACGGGACTCACACGGTTATTTCTGCTCATAGA------------GGCCTTCCATCGGCAGAAATGTTTACTAATTTGAATTTAGTGAAAAAGGGAGATACTTTTTACTTTCGTGTGTTAAATAAAGTATTGGCT---TATAAAGTTGATCAGATA---CTAACTGTTGAACCAGATCAAGTCACATCACTTTCTGGAGTCATG---GGGAAAGAT---------------------TATGCTACTTTGGTTACCTGCACACCA---...---TATGGTGTTAACACCAAGCGTCTATTGGTCCGAGGTCATAGAATT |
| Q97SB9_STRPN/85-210 | GTGGAAATCCCCGTTATTGACGTG...GATTTGCCGGTTTATGCTGGT---ACTGCTGAAGAGGTATTGCAGCAAGGGGCT---.....................GGGCATCTAGAGGGA---------ACTTCTCTGCCGATCGGAGGCAATTCGACCCATGCGGTGATTACGGCACATACA------------GGTTTGCCAACAGCTAAGATGTTTACGGATTTGACCAAACTTAAAGTTGGGGATAAGTTTTATGTGCACAATATCAAGGAAGTGATGGCC---TATCAAGTGGATCAAGTA---AAGGTGATTGAGCCGACGAACTTTGATGATTTATTGATTGTACCA---GGTCATGAT---------------------TATGTGACCTTGCTGACTTGTACGCCA---...---TACATGATCAATACCCATCGTCTATTGGTTCGGGGGCATCGGATA |
| Q97SB8_STRPN/77-202 | GTGGAAATTCCTGCGATTGATCAG...GAAATTCCGATGTATGTCGGA---ACGAGTGAGGACATTCTTCAGAAAGGGGCA---.....................GGGCTGTTAGAAGGG---------GCTTCGCTGCCTGTTGGAGGTGAAAATACCCATACAGTGATCACTGCTCACAGA------------GGATTGCCAACGGCAGAATTGTTCAGTCAATTGGATAAGATGAAAAAAGGGGATATCTTTTATCTTCACGTTTTAGATCAGGTGTTGGCC---TACCAAGTGGATCAGATA---GTGACGGTGGAGCCGAATGACTTTGAGCCTGTCTTGATTCAACAT---GGGGAAGAT---------------------TATGCGACCTTGTTGACTTGTACACCG---...---TATATGATTAACAGTCATCGTCTGTTGGTACGTGGGAAGCGGATT |
| Q9CHH2_LACLA/116-242 | ATCACGATTCCTCAGATTAAAGTCaatGATATTCCAATCTATCATGGA---GATTCTGAAAAAATTTTGGGACTAGGGGTT---.....................GGACATGTGCCTCAA---------TCCTCTTTGCCAATTGGAGGAATCAATAGTCATGCTGTCTTACCTGCTCATTCT------------GGGCGAGTGAATGATACTTTATTTACTAATCTAGATAAACTCAAAAATGGTGATATCTTTTATCTTCATGTTTTGAATCTCACTCTAAAA---TACAAGATTAATGATATT---CGCATCGTTGCTCCCAATCAAGTTTCATCTTTGAGTATTGAAAAA---GGACGAGAT---------------------TTGGTGACTTTAGTCACTTGTTATCCA---...---ACAGGTATTAATAACAAAAGATTACTAGTTACTGGTGAAAGAACA |
| Q97SB7_STRPN/98-223 | TTGTCTATTCCAAGTTTGGAAATC...ATGGAGCCGGTTTATTTGGGA---GCAGATTATCATCATTTAGGGATGGGCTTG---.....................GCTCATGTGGATGGT---------ACACCGCTGCCTCTGGATGGTACAGGGATTCGCTCAGTGATTGCTGGGCACCGT------------GCAGAGCCAAGCCATGTCTTTTTCCGCCATTTGGATCAGCTAAAAGTTGGAGATGCTCTTTATTATGATAATGGCCAGGAAATTGTAGAA---TATCAGATGATGGACACA---GAGATTATTTTACCGTCGGAATGGGAAAAATTAGAATCGGTTAGC---TCTAAAAAT---------------------ATCATGACCTTGATAACCTGCGATCCG---...---ATTCCTACCTTTAATAAACGCTTATTAGTGAATTTTGAACGAGTC |
| Q9XA14_STRCO/200-337 | CTGCACATCCCCAAGCTGGACGTG...GTGGTGCCGATCGCGGAGGGCATCAGCAGCAAGAAGGTGCTGGACCGGGGCATGGTC.....................GGGCACTACGCGGAGGACGGGCTGAAGACCGCGATGCCGGACGCCAAGGCCGGCAACTTCGGGCTCGCGGGGCACCGC---------------AACACGCACGGCGAGCCGTTCCGGTACATCAACAAGCTGGAGCCGGGCGACCCGATCGTCGTGGAGACGCAGGACAAGTACTTCGTC---TACAAGATGGCGTCGATCCTGCCGGTGACCTCGCCGAGCAACGTGAGCGTGCTGGACCCGGTCCCG---AAGCAGTCCGGCTTCAAGGGACCCGGCCGCTACATCACCCTCACCACCTGTACGCCG---...---GAGTTCACCAGCAAGTACCGCATGATCGTGTGGGGCAAGATGGTC |
| Q9XA15_STRCO/100-237 | CTGCACGTCCCGGCGATGAGCGAGggcGACATCCTGGTGGAGAAGGGC---ACGTCGATGAAGATCCTCAACGACGGCGTGGCC.....................GGCTACTACACCGACCCGGTGAAGGCGACGCTGCCCACCTCGGACGAGAAGGGCAACTTCTCGCTCGCCGCGCACCGG---------------GACGGGCACGGCGCCAGGTTCCACAACATCGACAAGATCGAGAAGGGTGACCCGATCGTCTTCGAGACGAAGGACACCTGGTACGTG---TACAAGACGTACGCCGTCCTCCCCGAGACCTCGAAGTACAACGTCGAGGTGCTCGGCGGCATCCCC---AAGGAGTCCGGCAAGAAGAAGGCCGGCCACTACATCACCCTGACGACCTGCACCCCG---...---GTCTACACGAGCCGCTACCGGTACGTGGTCTGGGGCGAGCTGGTC |
| Q9CGI3_LACLA/136-261 | ATTGCAATTCCCGAATTAAATATC...AATCTTCCTATCTTTAAAGGG---GTTGGAAATACTTCACTTTTATATGGAGCG---.....................GGAACAATGAAAGCT---------GACGAAGTCATG---------GGTGAAGGTAACTATAGTTTGGCTGGTCATAATATGACTGGATTTACTTCTGACTTATCTATCTTATTCACTCCGTTAGAGAAAGCAAAAGCAGGAATGACAATTTATGTGACTGATAAAGATAATATTTATCAG---TATAAAATTGATAAGATT---GATGTAGTGACGCCAGAACATGTTGAAGTAATCAATGATAGTCCA---GGTAAAAAA---------------------GAAATCACTTTAGTAACCTGTGCTGAT---...------GCTGAGGCAACTCATCGAATCATTGTACATGGAACTTTTGTA |
| Q99ZN4_STRPY/98-224 | ATTGCCATACCAGAGCTTGGCATT...AATTTACCAATTTTTAAAGGT---TTAGGAAATACTGAGCTTATTTATGGCGCA---.....................GGAACGATGAAAGAA---------GAACAAGTTATG------GGAGGAGAAAATAATTATTCTCTTGCCAGTCATCATATTTTTGGAATTACAGGTTCATCTCAAATGCTCTTTTCGCCGCTTGAAAGAGCACAAAATGGGATGTCCATCTATTTAACAGATAAAGAAAAAATTTACGAA---TACATCATAAAAGATGTT---TTCACGGTAGCTCCTGAACGCGTTGATGTTATCGATGATACAGCT---GGTCTCAAA---------------------GAAGTGACTTTAGTGACTTGTACAGAT---...------ATCGAAGCAACAGAACGTATTATTGTCAAAGGAGAACTAAAA |
| Q9F0P0_STRGN/100-226 | ATTGCGATTCCTGAATTGTCCCTT...AATTTACCAATTTTTAATGGA---CTGGAGAATGCAGGTCTTTATTATGGTGCT---.....................GGTACTATGAAAGAG---------ACTCAGGAAATG---------GGAAAAGGCAACTACGCTTTAGCTAGTCACCATGTTTTCGGGATTACAGGAGCCAATGAAATGCTCTTTTCTCCTCTTGATAGAGCGAAAGCTGGTATGAAAATCTATTTAACTGATAAAGAAAAAGTTTATACA---TATTCAATTACTAGTGTT---GAAAACGTGGAGCCTGAAAGGGTAGATGTTGTTGACGATGCAGCTGATGGTACAGCA---------------------GAGGTTACTTTGGTAACCTGTGAAGAT---...------GCTGCGGCAACTTCTCGTACAATCGTTAAGGGTGTTTTAGAA |
| Q9KFV9_BACHD/66-186 | CTAGAGATACCATCGATTGAGTTG...AAGCAAAAAGTGTTAAGTGAA---ACGACAGAGGAAAATTTAAAGCTTGCCTTA---.....................ACTCAGTTAAAAGAG---------AATCAGCACCCA---------GGTGAAGGAAACTTTGCAATTGCCGGCCATAGA------------GGGTATCGAGGCAATCGACATTTTAGCCGTCTGCCGGATGTGACGATAGGAGACGAAGTGTTTCTCCATACGAAGGAAGAAACGTTTGTT---TACAAAGTTACCGACATA---AGCATTATCGAACCGACTGATGTGGACATATTGGATGATCGAGAT---GGGAAACAT---------------------GAAATTACGATGATTACATGTACAAGA---...---------TCAGGGAAACAGAGAGTCGCGGTCAGAGGAGTGTTAGTG |
| Q9S446_STAAU/76-198 | ATTGAAATTCCAGATGCTGATATT...AAAGAACCAGTATATCCAGGACCAGCAACACCTGAACAATTAAATAGAGGTGTA---.....................AGCTTTGCAGAAGAA---------AATGAATCACTA---------GATGATCAAAATATTTCAATTGCAGGACACACT---------TTCATTGACCGTCCGAACTATCAATTTACAAATCTTAAAGCAGCCAAAAAAGGTAGTATGGTGTACTTTAAAGTTGGTAATGAAACACGTAAG---TATAAAATGACAAGTATA---AGAGATGTTAAGCCTACAGATGTAGGAGTTCTAGATGAACAAAAAGGTAAAGATAAA---------------------CAATTAACATTAATTACTTGTGATGAT---...------------TACAATGAAAAGACAGGCGTTTGGGAAAAACGTAAA |
| O27857_METTH/69-184 | CTCATCATACCCAGTATAGGGGTG...AAGTGCTGGATA------------AGGGAGGACACCGTAAATGCCTATGAATCAGTA.....................TACCACTATCCTGAA---------AGCGTTATGCCA------GGATCTGGTGGGGAGTGCGGAATCCTCGGACACAGG---------------ACAACCTACTCAGGACCCTTCAGGAAGATCGGAGCGCTGAGGAAGGGTGACAGGGTAATCATAGAGGATGCATCATCCTCCATACGC---TAC------------ATATACACCGTGACATCCAATGGTGATGATATAAGGTGGGACTACAGAACAAACCCTGTGAGGTTTTCCCAGAGCGGGGATGCAAGGCTGATGCTCATAACATGTTATCCC---...---------------------------------CCCGGCCAGAAGAAG |
| O27109_METTH/42-157 | ATTGAAGTACCCTCCATAAACCTC...ACAGAGACCATCAACAACAGG------------------------------------.....................TCAGTCTTCTACGGGGTGTACCATGAACCCATGTCCTACCCTCCCGGAAACCGGACGGTTATACTCTTCGGGCACAGG---------------ACCCTCTATGGTTCCCCCTTCCTTCACCTGGATAAACTCAGGGCAGGGGACAGTGTATACCTGAACTGGCCGGGCGTAGGATTTGCTGAATACCGTGTTAACAGGTCA---TTCATTGTGCCGGCCTCCTACCAGATGCCGGTGAATCAGGGTGCG---------------------------------AAGCTTTTCCTCATAACCTGCCACCCC---...---CTGGGGTCCACCAGGGAGCGGCTGATAGTTGAGTGCCACCTGGAG |
| Q9RCX5_STRCO/78-212 | GTCTCCATCCCCGCCATCCAGGTC...GACGCGCCGGTCATGGGGGTCGGTCTCGACGCGGACGGCTGGGTCGACGCGCCGCCGcccgaggacccgaacctggccGGCTGGTTCACCGGC---------GCGGTCTCCCCG------GGGGAGAAGGGCACCGCGGTCGTGGTCGGCCATGTC---------GACAACCAGCAGGGCCCCGCCGTCTTCTACGGACTCGGGGCCCTGAAAAAGGGAAACAAGGTGGAAGTGCACCGCCAGGACGGAAAGACGGCGGTTTTCGAGATCTACGGCATC---GAAGTGTTCGAGAAGAACAATTTCCCCGGC------------------GACCGGGTCTACGGCTCGAAAGGCAGTCCCGAATTGCGGGTCATCACCTGTGGCGGC---...---------GGTTTCACCAAGCAGAACGGCTACGACGGGAACGTGGTC |