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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF04198 alignment |
| O32754_9LACO/124-376 | DRLFNASQAEVWLAQALGIDRTIIV-.AGDADLQ...--SRVYDLAGEELNSALSL.LLPlADC.-IVTVMGGKTIAKVAKKLNRSlSENRSLIFVPGRGALGG--RVN-TESN-AVVQEMARAT.GGSYESLFLPEHVSKDAY-RSLVRDPEISGVLQDISQSDVVIHGIGLASE--MAR---RRGYDSVALARL.RENKAVTECFGC.FFDEEGHVVE.---RIRQVGLQFENLTNVPHILAIALGTRKAKAIKAYMRNApHQT.WLITDEAAANQILN |
| Q97L54_CLOAB/89-338 | REFKGLTDIEEFIRINLNIKKVIIV-.PGDIDED...-STV-MNEIGRTAAKFIQS.IIL.DGD.-IVAITGGTTMKTVVDNYSYS.PRYQNTVVVPARGGMER--NLQ-TEAN-TLAANFADKL.GASYKLIHVPDNLSNEAL-STIINEKSIKNAIDTIRKADIIIYGVGRADE--MSK---RRGLSEDEISHI.LGSGSVAEAFGY.FFDKEGNVVY.---HTPSLGLKTEDIKKAKNIIAVAGSKLKAEAIVATQING.RGN.ILITDEGTAKEIVK |
| Q9Z5C6_STAAU/89-337 | DIYADDNRLSEGIKNKFQIKEVHVV-.PGDADNS...-QSV-KTELGRQAGQLLEG.ILQ.EDA.-IVAVTGGSTMACVSEAIHLL.--PYNVFFVPARGGLGE--NVV-FQAN-TIAASMAQQA.GGYYTTMYVPDNVSETTY-NTLLLEPSVINTLDKIKQANVILHGIGDALK--MAH---RRQSPEKVIEQL.QHHQAVGEAFGY.YFDTQGQIVH.---KVKTIGLQLEDLESKDFIFAVAGGKSKGEAIKAYLTIA.PKNtVLITDEAAAKIILE |
| Q9K712_BACHD/89-338 | KELLGLRDLEAKLRSRLGVKEAIVV-.PGDSDAF...-TWV-KRELGRACIARMKE.AVK.PHD.-VIAVMGGTTLAAVAEMMTPD.PNMETVTFVPARGGLGE--QVE-NQAN-TISAQMAGKA.GANYKLLHVPDQLSEETY-ASLIAEPGVRDILEKIKSASMVIHGIGEANT--MAL---RRGSSEEFLHKL.TEEQVVAEAFGY.YFDKKGTVRY.---KQRTIGLQLDTLDDSKLVISVAGGASKAEAISAYMNYR.PSD.VLITDEEAAKRLLS |
| CGGR_BACSU/89-338 | KDVLGLTLLEKTLKERLNLKDAIIV-.SGDSDQS...-PWV-KKEMGRAAVACMKK.RFS.GKN.-IVAVTGGTTIEAVAEMMTPD.SKNRELLFVPARGGLGE--DVK-NQAN-TICAHMAEKA.SGTYRLLFVPGQLSQGAY-SSIIEEPSVKEVLNTIKSASMLVHGIGEAKT--MAQ---RRNTPLEDLKKI.DDNDAVTEAFGY.YFNADGEVVH.---KVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKKP.RNT.VLVTDEGAAKKLLR |
| CGGR_BACME/89-339 | KEVSGLRLLETTLKEAFSLSEVVVV-.SGDSDQS...-PWV-KNEMGRASVSCIKErLVG.KKN.-TVAVTGGTTLAAVAEMMTPD.LKHPDVLFVPARGGLGE--NVQ-NQAN-TICAKMAEKS.MSHYRLLHVPDQLSDEAY-RSIIGEPSIKDMLHLIKSAGMVVHGIGDAMT--MAE---RRKTPQADLEKV.KNGHAVGEAFGY.YFNHQGEVVH.---KVKTVGIQLDDLKNNKCVIAVAGGSSKAKAIKAFMQQA.HDS.ILITDEGAAKELVR |
| Q9L0Z6_STRCO/89-343 | VPAELDAERSDALRARYGLRHAVVV-.ESPADAE...ETPD-PENLGEVAADLLGE.LVN.EGD.-VLGLAWGRSTIHMAAALDR-.--LPPCTVVQLTGVYDAG--TAERGSV-EAVRRAAQVS.GGDAHPIYAPMLLPDAATAQALRHQTGIARAFEYFDKVTVACVSIGSWEP--GISTV-HDMLSDEERAHY.ASLGVAAEMSAH.LFDAEGRRVG.RDLGERCITVKADQLRRIPEVVAIAGGQRKAAAIDAVLRSG.LVT.SLVTDTSAADYLMT |
| Q98GB2_RHILO/49-296 | D-LATPDDITRQLIDGLKLRDAAVV-.ETPA---...-AGTLAALAAPLGGLLRQA.QLV.AGS.-VVAIGWGRAVREVIRAGLP-.-RMPGVLTVAATGGMQQ--QAAHFQVN-EFVRLAAEEF.GGTPHFIHAPYL-PSSELREVFLRDTAIRDAVALWERTDVAIVGIGLPHAINAPEASAA---TPSEQ---.ALVHAAGDVLRH.YFDAEGTLIA.WEGESRMIAMSPAQLRAVPLVIGLAASPEKATAIIAAVRAG.LIN.TLVTDTKTAQAILA |
| Q9RT33_DEIRA/86-346 | DPQGHPCSLQARLMERWPGVQAQVVGlPPHSTQ-...-DLR-LERVALAAAHWLGS.ALR.PGL.-VVGLAWGNTLDAVSRALTP-.RPLSGVQFVQLNGSASVL-ELSSGFVGG-TLTRLAQAV.RGQAHLFPVPTFFDDPATKQAMWRERSVQHVVQLQRQAELLLFSVGSPHAALPSHVYAAGYLDPDDLTQL.EREGAVGDIATM.FFRADGSWDG.LSLNARSSGPDLALIRDHPNTACIVADPGKAAALRAALDGG.LLR.TLIVDETTAAGVLG |
| O68117_RHOCA/59-314 | HKISACLDLEVALSRRFALKLARVV-.PALPAG-...-VDT-ARGTAPAAAQLLER.YLA.QPEpLIIAFGTGRSLSAMAAEVIR-.TPLAAHRIVSLISNIAP--DGS-ASFYD-VILRMADKL.QLPHYPMLVPVITDTIAERALFNALRPVQAVMELAARADVTFVGIGQLND--EAPLFKDGFITRAQHAEL.QAAGAVGEIVGG.IFDAEGRYID.TETTRLIGSFRIPAE-REQPVIGIAAGLSKQAAIRAALRGR.LIN.GLVTDESTARALLA |
| O30830_RHOSH/62-317 | HRVSGCLHLEAALLRRFGLKLARVA-.PSLGSE-...-VDP-LPSIAPTAAAEVER.VLR.SERpMVVAFGTGRSLRATVEEMTS-.MVCEQHKIVSLNGNISA--DGS-ASYYD-VIFRIADRV.RAPHYPMPMPVIAQDAAERELFHALKPVQSVLRLARNADVTFVGLGQMGE--DAPLLKDGFITPEELTEM.QDLGAVGEVAGW.VFDSEGRYLE.TSINQRVAGVRVE-LSEDRTVVAIAGGRRKLAALHAGLRGR.LFN.GLITDEFTAQALLS |
| Q98CZ8_RHILO/62-317 | HPIANCLDLAARLKSRFALDLVEVV-.PSDPNS-...-SST-TIGIAEAAAAEIER.RLR.SPTpIVMGIGTGRTLKAAIEQLPP-.MECPQHKVVSLTGNISP--DGS-AAFYN-VIFTMADRV.KARSFPMPLPVIASSPQEREMLLNQPMIQPTLALAAEADVTFIGIGDLGP--KAPLYEDGFISESELKAL.QKAGGIAEIVGW.VFDREGRMIE.GITNDRVSSASLPSR-EKSLVIALAMGERKLPGILAAVNRR.LVN.GLITDERTATALLA |
| O52721_KLEPN/59-312 | HPVANCLDYAQLLQEKYGLIECNVV-.PAFSE--...-EST-LDSVSFGCYQLMAR.YLQ.DDKeKIICLGSGLTLKKALQRIDF-.DSLN-TRCVALISAMNA--DGQ-CNYYDDVPLLLTRKI.KAKYYQWPAPRYAQSADEYEMWCTNRLFRSVSGVAREADVIFVGIGPLGT--QSPIFKDGFINQAQMDEL.TARGGIGEILGR.FIDAQGDVVD.SEINRMITSYDIRQS-HC-PRIAAACGEHKRPAILAALKGG.WIN.GLVTDEHTARWLLT |
| Q9ZB29_BRUAB/56-311 | GDITECIDLENRLADLYGLDYCEVA-.PDIGEE-...-GLP-LMALGHAGANFMRR.EIE.HGDhEVIGIGHGRTLSAAVGYMPR-.VMANDLRFVSLLGGLTR--NFA-ANPHD-VMHRIAEKT.GMPAYVMPVPFFANTAEDREVLLAQRGVTTVFDMGCRAELKIVGIGTVDA--QAQLVTSGMIELGEVEEI.ANLGGVGEMLGH.FFNANGQWLE.TALTGRTIAASVENA-DMSRIVALAGGLSKVDAIRAVLKSG.RLY.GLITDERTAKALIG |
| Q986P9_RHILO/64-319 | GEVSECVELEDELSRRYGLDYCEVV-.PDFDSE-...-DLP-LKALGIAGAQFLKR.EIE.RGEeALIGVGHGRTLAACVEYLPR-.TSTDKIRFVSLLGGLTR--KFS-ANPHD-VIHRLAERT.GAEAYVMPVPMFANTAEDRTVLLGQKGISEVFDLARSADLLFAGIGTAER--EASLVATGMIEKGEMEEI.RRNGGVGELLGH.FFDEAGKAVA.TTVSDRALALTREDI-SSRRIVAVAGGKIKVRAIKSVLEGR.YLK.GLITDERTARSLVE |
| Q9CLG2_PASMU/68-318 | SRFTGCLELEEALKEHFQLKHIRIL-.PALEK--...-NEI-NERLGIGASQMLMS.MLK.PNQ.-RLAIGFGETIMQTIKHSNEF.ITHNHLKLITLSGGVGPY------------MKGIGQLDgSCSVSIIPAPLRASSIEAAKLFKREACVRDIMLAACHADAAIVGIGATRQKGQATLLRTGYITEEKQRLI.REQGAVGDILGY.FMQKDGQLQPdMPLHEELISVTLDNLKKIPNVIGIAGGEDKVEAILSALYGQ.HIN.SLVTEEKTARMMLA |
| YDEW_ECOLI/66-316 | SRFEGCLEYETQLRRQFSLQHVRVI-.PGLAD--...-ADV-GGRLGIGAAHMLMS.LLQ.PQQ.-MLAIGFGEATMNTLQRLSGF.ISSQQIRLVTLSGGVGS--YMTG----------IGQLNaACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMI.GRKGAVGDILGY.FFDAKGDVVTnIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGG.YIN.ALVTDQDTAAAILR |
| Q9WWA6_9RHIZ/83-337 | SPYVSSPMLEKELVAKFDLRKAVVV-.PAPVRP-...-DST-PEAVGAGIGQYLNA.RLS.DQ-.MSLGIISGRTFHAALSALEA-.RAIPGLSIVSMIGGLTV--KAA-MRPYE-VAHQLAQIY.QAECYYMPAPTYAESKKARDEFLAQSLVQEIMRRAAAVDIAIIGVGRLTE--DGVIRAYDLLQEEEMDSL.VQAGAVGSFVGW.FINKDGTLVE.HALNDRVIGLPLDRLKDLPEVVLCGGGIGKAQALAAVLRAG.YAD.VLITDEAAARRLVS |
| Q98FV1_RHILO/42-296 | SELSEIVRLERALERTFGLQQALVA-.PLTAPN-...-ADP-IPAISAKTGAFLSD.TMK.SGM.-RVGVGWGRTLFSSLPFISA-.KSLSDFKVISLLGGVGV--VRR-YNPAE-FAWRFAQIF.QGDGYLIPTPAVVDSVETKIALVERCGLQEVFEMANVLDAVLLSVGGIAS--ATTFSRGGFLREADREAL.LERGAVGDLLFH.FFDRNGDLVD.HPVNSHVMSVEVDRLRAAPIRILTSGGEEKTEALLGAMNLI.APT.ILITDEESAKRMLE |
| Q9CKH2_PASMU/56-313 | YHPIFTSKLEQRLIEQFGIHRALIA-.IDTQNE-...-VEQ-RKQVAALVNAYLSS.TLK.DG-.MTVAVGQGRNVAAVGEYVGV-.FPERNCKFICGIGGTHR--IGPPIDA-DHICRNLARKF.NGTNETLYSPAYLEKPEFRDIFLQNGVIKETLDKARKADIALVGIGDMNE--NSYMVQLGWFTPQEITHArMNLGVVGEIAGYgFFNFQGEPAD.TVMNNRVIGLSLEDLRKIPCVIGIASENTKATAILGALRTG.IIN.IIATTASNINTILS |
| Q9KLX0_VIBCH/62-319 | YHPVFSAKIEQRLIERFGVRRALIA-.LDQPND-...-EAQ-RQQVAGLVSNYLTS.TLK.NG-.MVVTVGQGRNVSAVAHHVGV-.ITPRDCKFVCSIGGIHP--RGGMFNA-DHICRQLAKKY.GGSSETLYAPAYAENPEQKRVFMQNSTVKQTLDLARKADIALVGIGDMSE--NSYMVDLGWFTPEEVVQSrLNQGVVGDFAGHdFFDVHGRIAN.TVMNDRVIGLGIDEFRPIAEVIAIAAENSKPLALLGALRTG.AID.VIATSVSNALTVLN |
| DEOR_BACSU/56-311 | DPFEDLDALGSILEEKYGLLEAHVVFsPTPD---...YAGI-THDLSRYGAEYMHE.TVK.DGD.-IVGVSWGTTMYQIAQNMQP-.KQVKGVEVVQLKGGISHSR--VNTYSAE-TIQLFAEAF.QTMPRYLPLPVVFDNADVKRMVEKDRHIERIIEMGKQANIALFTVGTVRD--EALLFRLGYFNEEE-KAL.LKKQAVGDICSR.FFDAKGNICS.SAINDRTIGVELQDLRLKERSILVAGGSRKVSSIHGALTGK.YAN.VLIIDQHTARALVN |
| Q9KER9_BACHD/57-313 | DENIHTVELEQRLEKKYHLKEAIVV-.PTSGLTQ...-DMI-KRAIGKATSYYVSK.NIK.GMD.-SIGISWGTTVSSFVQEYPY-.EQHRELKVIPLVGGMGRK--FVELHSN-LLAYELAKKM.NCECSYLYAPAMVEAKELKERLIQSEDIASVLEEGRNVKMAVVGIGSPFK--GSTMKVMNYLKEEDIATL.KKIGAVGDMSSR.FYDALGQPID.HPLNELVIGIDLDELKRIPIVIGVSEGAHKVDSVEAALKGG.YLD.VLVTDDSTAQSLIN |
| SORC_KLEPN/57-315 | YDYNENLWLEQQLKQKFGLKEAVVA-.SSDGLLE...-EEQ-LSAMGQHGALLVDR.LLE.PGD.-IIGFSWGRAVRSLVENLPQR.SQSRQVICVPIIGGPSGKLE-SRYHVN-TLTYGAAARL.KAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAI--RDGANWHAFYGSEESDDL.NARHVAGDICSR.FYDINGGLVD.TNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGR.YIN.CLVTNRETAELLLK |
| Q9RGG7_LACCA/60-316 | PETTAVSQLVDFFKQKYGLRDAVIV-.PASENG-...-GNE-LNALSVYASMFLSK.IIK.SDD.-VIGLSWGSTLSSVISQFPTD.KKLHDIKVVPLVGGPMGRI-PSNYHVN-YLTHRLANRL.NGTAFVLDSPAFVRSKALRKELLANPNTQEILSLWTRVNIAIFGMGSSLI--TDSPDWQAFYENTNFKSY.FSAEMVGDILSH.PFDKSGKVT-.RDIDSILVALPLSALKKVPYSVGIAFGEDKVTAILAALRGG.LLN.TLITTEATAKSIKD |
| Q99XS9_STRPY/56-314 | DYDADLFALEEYVRQQYGLEKLDLV-.PNQVEDT...PMDT-LTNVAKTAAEVFRH.VVK.DGD.-KIGLSWGATLSCLMDELNP-.KAMKDVFIYPLAGGPSHI--NAKYHVN-TLVYRLARIF.HGNSAFMNAMVIQEDKHLAKGILQSKYFNDILTSWDQLDLALVGIGGEPNS-LEQSQWRDLLTSSDHDQL.KYEKAVGEVCCR.FFDQAGQPVY.TGLQDRTIGISLEQLRRVPKTMAVATGKHKAKAILAALKAG.FIN.YLVTDKETMLAVLA |
| Q97SS7_STRPN/56-313 | NFDTNMFKLENYVKEKYSLESLEII-.PNEFDDT...-PTILSERISQVAAGVLRN.LID.DNM.-KIGFSWGKSLSNLVDLIHS-.KSVRNVHFYPLAGGPSHI--HAKYHVN-TLIYEMSRKF.HGECTFMNATIVQENKLLADGILQSRYFENLKNSWKDLDIAVVGIGDFSN--KGKHQWLDMLTEDDFKEL.TKVKTVGEICCR.FFDSKGKEVY.ENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRAN.LVN.HLITDKNTILKVLE |
| Q986M3_RHILO/57-311 | TQLFTDDVMARRLEDALKLDAVWIA-.PENGYI-...-PDP-STDIAVLAASVFLE.LVK.KGD.-RIGVAWGRTVYTIADIMSY-.ADLQDVTVVQLCGNLGA--PYS-YRPDQ-CTMEIARRL.NAKGLNFYAPLVLSTEDLARALRAEPVIREQLAGISDCNLALFSVGTVDA--DSHVVKCGALNPDEMAAL.RGIGAAGVIAGQ.IIDARGEALD.CSYNRRVISAELGSLRAIEKRLMVVQEDSKFEPLLAALAGG.LCT.HLVVGAHMAQRLLD |
| YJHU_ECOLI/1-261 | MNVFGSIDAALQIRDKFNLQRVIIV-.PDGEHAGkrdDTKLMRTRLSRAGGMYLNQ.VIE.NGD.-VLGVAWGRTIHQMSKTMTP-.KSCKNVTVIQMLGSMPS--QP-DLTII-ESSSQIAYKL.SGRVASLHVPAVVSSARLAMELQAEPIIRSNFDVLTRCTKAFFVVGNALD--ENPLIRVGVLNKKEMQTY.RDLGAVGVICGR.FYDKEGMPVV.ADVDQRILGISLAQLRQIERKIFLAGGERGYDATLGALLGG.YVT.DLIVDEGTAEFLLA |
| Q9CGB1_LACLA/54-307 | SPIERSFELEKQFKTLFDIPQIYII-.KDVEDGN...-----SESLIKFAAKRIES.HIL.NSQ.-TVGTVWGETIFRIIDHFTP-.QEHSDLLFTQMMGENRKY--HSAAGSM-RMVEKAAKQF.SAQYVTLSGPLYITNPAVRKGMTEEIASQPAFTTAKRMDLIFSGLGTLASVNSIPIWEQH--TNEIFPDI.NLGAIAGMAYGR.PYDINGNILV.TPENDCVFGVDMKTIFQPPKRVGVVKSKFKTQATLGALRGK.FFT.ELIISESIAERILA |
| O86289_LEUME/54-309 | ENSNRNPQIEHILCDKFKDINFYVV-.QDDINN-...-ITT-SEHLANFAATYVDE.VLQgNNK.-IVGLTWGETIYTMIDSLKN-.RPLEAVKFTQFLGENMKY--NSTAGSM-RMVERAAKKV.SGEFLTLPAPLYILNDSVRNGLYSEPSLQNTIAVADNMDALITGVGTILSLDSIPIWKQNL--NAIFSTV.NTQEIAGLIYGR.PYDINGRFLN.LEA-DKVLGLRIDQILKVPKRICLVRGKSKYMPVIGAIKGK.LIT.DVIMTEGMAYKILN |