EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04188 alignment
(5 sequences with 1743 bp)


YBL4_YEAST/1-433 ATGATTGTGGGG------------------------------------------TTGACACTTTATTTTGTATTATTCCGTTCAATACAGTATTTACTGGTTTTTTTGACTCCAATTAGGCAGTTTGATACATCAACATCACTTTTATTAAACGAATTATGTTCT------------------TCTCCCTCTGAAATCAACAGTTATTGGAACAAGTATTTTTGGAATAAGCTACTATCATGGGACAGTGTTTTTTTTATCAAGAACATAACTTCCAAAAACGGAAAACCTCAATTTGAGCATGAATACGCGTTTTCTCAGTTGTGGACTTTTTTCGTTAGGCTGTTTATTAAAAGTAATAACGATAGCATCTACCATGCCTTAAGGGTTGGAGTTGCAATAGAAAATGTTTTATTTTACTTGTCAGGTATTGTTTTATATTTTCTAACAAAAAAAATTTTCAGCCAAAATATAAGGCAATCACAGTTTGCTAGAACTATCGCTAAAAAAACATCTCTGTTGTTTTTCTTAACGAGTGCCGCTGGATTTTTAACAAGCATATATTCTGAACCATTATCTTTTTTTTTTGCATTTGTTGGTATTTGGAGTCGTGAATGCACCATTTCCGTGCCCGTATTGGGTCAATTCGATATTTCGTGGAGATATTGGTTTCCTTACTCCTTTATCAGCATGGCTTGCTTTACCTTAGCATCCTTGAATCGTTCAAACTGTGTTTTGTTAGGGATTTACTTTATTTTTGACCTTATTGAACTAACAAAGAACAGGAAGTTTGTAAAAGCAATATGTTTCCCACTATTATCAGGATCATTAATGTTTTCTGCTCTACTATATCAACAATATTACCTACCATATAAGACATTTTGTCCTCAAAGG---------------------------------------------------------------------GGT------------GAATGGTGTAAATCTCAATTGTTTTCAAGCATTTTTATCACGAAAACTTCTTTATATTCCTACATTCAGAGTCATTATTGGGGA---------GTTGGGTTATTGAAATACTGGACCCCAAACAACATCCCAAACTTTTTGTTTGCTGTCCCAAATATTATTATTTTAATCTATTCCTCCATATATTTCAGCAAA---------------------------------ATTTATCCCTCCTATAACTTGAAG---------------------GCT---------------------------------------------------------------------------------------------------------------------------------------------------CTCGTATGGATCACCAGAGCACTGGTCGTCATAGTATGCTTTTTTGCCCATGTCCAAATTCTGAATCGTATAGCCTCC---TTTTTACCCTTGCACCTTTGGTATTTGGCTGATAGATTGGTTAAAACTTCT---------------------GATCCAAAAAAAATGGAAAATCCGAAAGGTGACGAT---------------------AAG---------ATAGTCAAGTTTTACATATACTGGTTGGCA---------------------------------------TTCTGGATACCTTTACAGACTATCCTATTTGCAGCTTTTTTACCACCAGCC
YA35_SCHPO/10-426 AACGCAGAAAAAAAATCGAACAGTTACTTAGCGATAAGGATGACTAGGTCGGGATATAACTACTTTAAAGGTATCTGTGTTTGCACCTTTTTGCTTTCTACGATTCTTTATCTTGGCATTGCAGTAATAATGTCACACTTGTGTGTTTTTGATGATACTGCAATGTTATATCTACGACAAAATCGATCACGTTTAGCTGAATCAAATATATTTAGAACCCTGTTCATATCTTGGATTCGATGGGATGCTATCTATTTTGTTGAT------ATGGCTGTCAATGGT---TCTCTATTTGAACAAGAATGGGCTTTTTCTAGCTTATGGCCAAAAATTATTTCTTTTCTTGCT------TTTCGAAGCAAGGATGTTGTGCTTTTAGGCATAGTTTCTTGTTTTGCTTCT---------------------ATATTTTTTCATGCAATTGCTTGCTATGCCCTTTACCTATTAACGAAGTCCATTTTCTCAAATCAAAAAATGACCGCTTATACAGTGATATTTTATTGTTTCTCTCCTTCTGGAATATATATGTCCGTGGGTTACACAGAATCACTCTTTGCTGCTTTCAGTTTCTTGGGGCTGCTTTTGTTCATAAAGAAGCAA------------------------CAATATCCCGCAGCATTTTTGTGGTCTCTTGCAACCTTA---ATTCGTAGCAATGGAATATTTTGGTGCATATTCTTTGGAATGCCAGCTATTGGGACCTTAAAAATA---AGCTTAGAACGATTACAACTTACATTTATGCAAGTTTCCCAGCTAGTTGGTTATGGAACAAAATGCTTAATTATACTTGTTCCCTTTTTCTACAACCAGTATCTTGGA---TTCAAATTATTTTGCCCCGGA------------------------------------------------------------------------------------GTAGCTTGGTGTAATAAATCATTACCTCTT------------------------ATTTATCCAGCGGTCCAAGAGAAGTACTGGAAC---------GTTGGATTTTTGCGTTACTGGACCCTTAACAATATCCCAAACTTTTTATTTGCTTTACTCTCTATAATACCCATCTTATTTGCATTGTTTTATTCAATTTCT---------------------GGATCC------ACTTTACACAGTTTCCGATCCATCAAATCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCTTGTCCTGAGTGCCTTATATCTCTATATAGGCTGTTTCCACATGCACACTCAAGTTTTAAACAGAATGTCTTCA---GCTCTTCCACTTCTCTACTGGTCAATGGCTCATGCAACCTTGTAT---------------------------GCAAAATCCAGAAACTTAAAAGCTTTTGGC------------------------------------------CATTGCATCTTGTTTGTATGGATAGTT------------------------------------------TACACTGTCATACAGGCAGGTCTCTATGGATCTTTTCTACCACCTGCT
Q9U3X2_DROME/1-449 ATGACAGAGAAA------------------------------------------GTGACTAAACTGGCGCTGGCCAGTCGCCTTATCGTCCTCCTGGTACAATTGGTCGCCAAC---GGAGCCCTGCCAGAGCACAAACCAGATGTATTCCGGATGCCGGTTTCG---------CCAGATCAGAATGCCTCCTGGATAGACAAGATGATTAAGCGCTGCTTGGGAGGA---TTACGGCACTGGGATGGAGAATACTTTCTGCAT------ATAGCCGAGAATCTG---TACAGCTACGAAAACACGTTGGCCTTCTATCCACTATATCCGGTTGTCGTGCGTCACGTGGGA---CAGGCCGTGGAGGCCATCGGGATCTCCTTATCACAGGAATCTATCCTGCTGGTGGTGGCTGTCGCCCTGAAC---CTCTGGCTCTTCTGCGAGTCAGCTAATTTGCTGTTTCAGCTCACCCAAGTATTGTTCAACGATTTAAACAAGAGCTGGAATGCGGCCCTCATCTACTGCTTTAATCCGGCAACCATTTTCTTCACCGCCGCCTACTCAGAGACCTTTTTCGCCTACTCCAGCCTTCATCTGATGCTGGAGTGCTCGAAGCCG---------------------------ACGGGTAGCTTCCGATATCTGCGTTTGGGAACCGCCTTA---GCCGCCTGTTTACTGTGCCGCTCAAATGGATTAATCACCTTGGGATACCCGCTCTACTTCTTCGGACGCCAACTGCTGCTCAAGAACAAGGAACCCAACACCTGCATGCAGCTGACACAAATGACGCTGACCATTCTGGGAGCCATTGGGATACTGCACACCTACTATTTCTACATA---TACAGGCTATACTGTCTGCCGAACACAAGGCCAAACCATCCGCAGCACATTGTGGACTACGCAGTGGAACGGAAGTACCTATTGTCTGGCCAGGGCTCTGAAGGATCACCTTGGTGCCAGTACACGTTGCCGTTC------------------------CCCTACACTTACGTGCAGTCGCACTACTGGGAT---------GTGGGCTTCCTGCGATACTACAAGTGGAAACAGCTGCCCAACTTCTTGCTGGCCCTGCCCATGCTGAGTTTCATGCACTGGCACTGCTACGACTACATGCAG---CATTTGGCCAAAGCGGTCTGGGCCAAATTGACGCCCTCTGGCTTCAAGGAGCTGATAAGG------------------------------------------------------------------------------------------------------GACCAC---------------------------------------------ACCACATTCCCTTTCGTGCTGCACGCTGCGATTCTCACCCTTGTCTGCACCGTCTACGTGCACATCCAAGTGTCCACACGCCTCCTGGCCTCGGCCACACCTGTTTTCTACTGGTTTGCCGCTGACCACATGCCC---------------------------------AAGACACTGGCCCAACTAAAACTGCGTTCG------------------------------------AAGGCAGGAGCTCTCTTTGTATGGTGCACC---------------------------------------ACTTATAGTTTGGTGGGCACGGTGCTATTCAGTAATAATTACCCGTGGACG
Q9NUD9_HUMAN/7-493 TCCCGGAAGGAG------------------------------------------GTGCTGAGGTTTGCAGTCAGCTGCCGTATCCTGACTCTGATGCTGCAGGCCCTCTTCAAT---GCCATCATCCCAGATCACCATGCAGAAGCCTTCTCTCCTCCTCGC---------------CTGGCCCCCTCAGGCTTTGTGGACCAACTCGTGGAAGGTCTTCTGGGCGGC---CTGTCTCACTGGGATGCTGAACACTTCTTGTTC------ATTGCTGAGCATGGC---TACCTGTATGAGCACAACTTTGCCTTCTTTCCTGGTTTCCCCTTGGCCCTGCTGGTGGGGACT---GAACTGTTGAGACCCTTACGGGGGTTACTGAGTCTACGCAGTTGCCTGCTGATTTCGGTAGCATCACTCAAT---TTCTTGTTCTTCATGTTGGCTGCAGTTGCACTTCATGACCTGGGTTGTCTGGTTTTGCACTGTCCCCACCAGTCCTTTTATGCAGCTCTGCTTTTCTGTCTCAGCCCTGCCAATGTCTTCCTGGCAGCTGGTTACTCAGAAGCTTTGTTTGCCCTCCTGACATTCAGTGCCATGGGGCAGCTGGAGAGGGGCCGA------------------------GTCTGGACTAGTGTACTCCTCTTTGCCTTTGCCACTGGG---GTACGCTCCAACGGGCTGGTCAGTGTTGGCTTCCTCATGCATTCTCAATGCCAAGGCTTTTTCTCT---TCTCTAACGATGCTGAATCCTCTGAGACAGCTCTTTAAGCTGATGGCCTCTCTGTTTCTGTCGGTGTTCACACTTGGCCTTCCCTTTGCCCTCTTTCAGTATTATGCC---TACACCCAATTCTGTCTGCCAGGCTCAGCCCGCCCCATTCCTGAGCCTTTGGTACAGTTAGCTGTAGACAAGGGCTACCGGATTGCAGAG---GGAAATGAACCG---CCTTGGTGCTTCTGGGATGTTCCACTA------------------------ATATACAGCTATATCCAGGATGTCTACTGGAAT---------GTTGGCTTTTTGAAATACTATGAGCTCAAGCAGGTGCCCAATTTTCTACTGGCTGCACCAGTGGCTATACTGGTTGCCTGGGCAACTTGGACATACGTGACCACTCACCCTTGGCTCTGCCTTACACTTGGGCTGCAAAGGAGCAAGAACAATAAGACCCTAGAGAAG------------------------------------------------------------------------------------------------CCCGATCTTGGA------------------------------TTCCTCAGTCCTCAGGTGTTTGTGTACGTGGTCCACGCTGCAGTGCTGCTGCTGTTTGGAGGTCTGTGCATGCATGTTCAGGTTCTCACCAGGTTTTTGGGCTCCTCCACTCCTATTATGTACTGGTTTCCAGCTCACTTGCTTCAG------GATCAAGAGCCGCTGTTGAGATCCTTAAAGACTGTGCCTTGGAAGCCTCTTGCAGAGGACTCCCCACCAGGACAAAAGGTCCCCAGAAATCCTATCATGGGACTTTTGTATCACTGGAAAACCTGTTCTCCAGTCACACGATACATTCTAGGCTACTTCCTGACTTACTGGCTCCTGGGACTACTCCTACATTGCAACTTCCTGCCTTGGACA
O65394_ARATH/11-492 TCAAGGAAAGAAACCATC------------------------------------TTGATCAAATACGCCATCTTCTCGCGACTTCTCGTTCTCTTCTTAACCATTTTGTGGCGGAGCTTACTCCAACCGTACGATACATCCGCTGCACTGAATCCTCCTTGCTTGTATCACAAAGAAGATTCTTTTCCGTTTCTAGTAGCCAATGCAGCTTCGAGATCCCTTGAGAAC---AGTGTTGTCTGGGACAGTGTTTATTTTCTCCGA------ATCACAGAGTGTGGC---TATGAGTATGAGCAGACTTACGCCTTCTTGCCTCTGCTTCCTTTCTTCATCTCGCTTCTCTCTCGCACAGTTTTTGCGCCTTTGGTTCCATTGATTGGTCTTCGAGCTGTGATGGTGTTGTCTGGTTTCACTGTTAGT---AACTTGGCGTTCATATTTGCTGCTATCTATCTATTTAGGGTTTCAGTTATTATCTTGAAGGATACTGAAGCATCATTCAGAGCTTCGATTATCTTCTGTTTCAATCCGGCGTCCATATTTTATTCGTCAATATATTCAGAAAGTTTGTATGCTCTTTTCTCTATTGGAGGAGTGTATCACTTGTTATCTGGTACC------------------------AGCAATGTAGGCGTTCTTTGGTTTGCTCTCTCAGGCTGT---GCAAGGTCCAATGGAATTCTTAATGCTGGTTATATCTGTTTCCAGACAATGCATCGAGCATATGAA---GCTTTATATCAGAAACGGCGTGCTTATTTAGCTATGCAGGTTTTTATTGCTGGATTTCTTAGATGCATATGCATTTGTCTTCCTTTTGTCGCATTTCAAGCATACGGA---TACTATAACATCTGCCATGGACATACGCGT------------------------------------------------------------------GATGAAGTGAGGCCTTGGTGCAAAGGAAGGATTCCGTTG------------------------CTGTATAACTTCATTCAAAAGATTCTTGTTTCTGACAGGGGAGTAGGTTTCCTTAAATACTTTCAGTTTAAGCAGCTCCCAAACTTTCTGCTCGCATCCCCAATTCTCTCTTTAGCTGTGTGTTCGATTATGAGTTACATGAAGTCTCGGCCTGAGCTCTTCATATCGCTGGGGTTTCAAGCCACCGAGAAAGAAAAGAGATCTGCTGCCAGACTTTATTCTCTGAAGGATGCAGTTGAACCAAGTGTTAAAACTTCAACAAATGAAGGAAACCATGACATTAGGCAGCGGAAACCTAGCAGTAAGAAGGATGTGACTGGGACCAAAGTGGCTCCAGAAAAATCAGGATACCTTTCAGCTGATGTTTTCCCATTTATCGTACACTTGAGTTTTATGGTAACCACGGCGTTCTTCATCATGCATGTCCAGGTTGCAACAAGGTTCTTGTCA---GCAAGCCCTCCACTTTACTGGTTTGCATCGTCTTTGATTGGATCTCCA---------------------------AAACATAGTAAATGGGGGTACTTG------------------------------------------------------------ATATGGTCATATTGTGCA---------------------------------GCCTATATCCTTCTTGGTACTTTGCTCTTCTCAAACTTTTATCCCTTCACT