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PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF04166 alignment |
| PDXA_PASMU/24-327 | LLAKQN--IREKA.NIVLVADKDEL..EKGMEIAKAQ.F.........VYEEVSFHQ.LGQYE---FK.TGVPVLI.SHksshpkP.FE........Y.GKVTEQSGVYILETLKVALNLAKMGYVQAICFAPLNKQAMHKG....GLRYRDELHWFAE......QTD.....-FN.....EFVCELnVVD.....-DIWAARVTSHIPFKDIVPNLSIKGVFDCIHLLYRSLVQAG-VENPKIAVQALNPHGGEGGVFGDEEMTIIQ....................-PGMEQAR--KAGIDVY.....G.....PFPGDTTMREV........ERLKI-.-NGVVSMYHDQFSTALKILGF.ERGVTVQGGIPIPITTANHGTAFDLHGKN.IAIPTAFEAAFNIAV |
| PDXA2_PSEAE/27-330 | LLADTE--VREKA.HIVLIADEAEM..RRGMRIAGCE.F.........PYRRID---.-ALET---LD.FADATPL.LH......P.WLsqggdefpR.SEASAVGGRYSLETLALALELTRSGRTDAILFGPLNKTSLHMA....GMDHSDELHWFAE......RLGfggpfCEF.....NVLDDL.WTS.....-R-----VTSHVALAEVPGLLSQERVGEAIRLIDDALRRSG-LARPRIGVCGLNPHNGDNGSFGREELDIIA....................-PAVQKAR--EQGIAAD.....G.....PYPADTIFLKV........QGD-ARaFDAVVTMYHDQGQIAIKLMGF.SRGVTVQGGLPIPIATPAHGTAFDIAGQG.RADVGATRQAFEIAC |
| PDXA_XYLFA/24-317 | L--VQQ--PRQDC.RLVAFADPATL..QAAAAALDLP.L.........RLLPPE---.-ALAERPGDL.PIQAQCH.VH......P.TR........F.GHPDPANAPAVIAALCEAASDCVHGALHGIVTGPVHKAVINQS....GIHYTGTTELLA-......AQA.....-EC.....DVVMML.ANP.....-HLRVALVTTHLPLRDVPDVITAALLERCLRIVNTAMCGDFGIATPRIAVLGLNPHAGEGGYLGREELDVVI....................-PVLQRLR--AEGMVLL.....G.....PLSADTAFLPT........KLIGY-.-DAVVAMYHDQGLPVLKHSGF.EQAVNITLGLPYPRVAVDHGTALDLAGRG.VADPSSLFAATALCA |
| PDXA1_PSEAE/23-321 | L--ARS---AQPH.PLIAIASRTLL..QERAGQLGLA.I.........DLKDVSPAAwPERPAKAGQL.YVWDTPL.AA......P.VR........P.GQLDRANAAYVLETLTRAGQGCLDGHFAGMITAPVHKGVINEA....GIPFSGHTEFLAD......LTH.....-TA.....QVVMML.ATR.....-GLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIE....................-PCLERLR--GEGLDLI.....G.....PLPADTLFTPK........HLEHC-.-DAVLAMYHDQGLPVLKYKGF.GAAVNVTLGLPIIRTSVDHGTALDLAGSG.RIDSGSLQVALETAY |
| PDXA_ECOLI/25-322 | L--AQR---EWPV.ELVVCADATLL..TNRAAMLGLP.L.........TLRPYSPNS.PAQPQTAGTL.TLLPVAL.RA......P.VT........A.GQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDA....GIPFTGHTEFFEE......RSQ.....-AK.....KVVMML.ATE.....-ELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTII....................-PVLNELR--AQGMKLN.....G.....PLPADTLFQPK........YLDNA-.-DAVLAMYHDQGLPVLKYQGF.GRGVNITLGLPFIRTSVDHGTALELAGRG.KADVGSFITALNLAI |
| PDXA_VIBCH/24-322 | L--SAQ---DWPH.QLVVCADKALL..AQRATQLGIQ.V.........KLLDYQRDN.PVQAQQAGTL.LVEHIPL.AE......P.VV........A.GQLNPANGHYVLKTLERAAKGCMNGEFDAIVTGPVHKGVINRA....GVAFSGHTEFFAE......QSK.....-TP.....LVVMML.ATE.....-GLRTALVTTHLPLAEVPQAITCERLEQIVHILHKDLVEKFAIAEPKIYVCGLNPHAGEDGVLGMDEIETIT....................-PTLQRLR-EQYGMQLV.....G.....PLPADTIFSEK........YLQQA-.-DAVLGMYHDQVLPVLKYKGF.GRSVNITLGLPFIRTSVDHGTALDLAGTG.QADAGSFWTALAYAI |
| PDXA_CAUCR/24-325 | A--WRA--LRQDGpTFVVIGDAQLL..ASAGGGVKVR.A.........VTRPQE---.AAQVFPDALP.VLD-IPV.LS......P.VV........Y.GRPSPSHAPQIIRWIETGVGLALSGAVSGLVTAPIAKAPLYEA....GFQFPGHTEFLAEltaaasMVG.....-AR.....GPVMML.AAG.....-DLRATLVTIHTALAKAPSALTTEAIINSGLVTAQALRKDFGIAEPRLAVAALNPHAGEGGALGREEIDIIA....................-PAVEALR--ALGVQAS.....G.....PAPADTLFHPE........ARARY-.-DGVLCMYHDQALIPVKMLDF.WGGVNITLGLPIVRTSPDHGTGFDIAGRG.IARPDSLIAAIQLAA |
| PDXA_RHILO/28-330 | L--ARE--AVGLP.AFYLLADPALI..ASRASRLGVS.V.........PIVETTPAL.AAQVF-ARAL.PIVPLAA.RF......I.DS........P.GRPDPANAAGTVEAIDRAVAACLAGDAAAMVTCPIAKKPLYDA....GFRFPGHTEYLAH......LAA.....-RHsgveaMPVMML.AGP.....-DLRTVPVTIHIALAEVPKALTTELIVATARITAADLAGRFGIARPRLAIAGLNPHAGEGGSLG-LEDEHIV....................RPAVDILR--AEGIDAF.....G.....PLAADTLFHAR........ARAGY-.-DAALCMYHDQALIPAKTLAF.DDAVNVTLGLPFIRTSPDHGTAFDIAGKG.IARPDSLIAALKLAR |
| PDXA_SYNY3/27-337 | A--LAEPGLASIC.QLTAIGSRSVLdqTRRQLLAQNPgL.........NLADPE---.-----TINLL.EVDLSYLgKI......T.VG........Q.GDAV--SGAISFAYLNEAITRTLAGEFDAIVTAPIAKSAWQAA....GHNYPGQTEVLAH......RAG.....-VE.....SFAMAF.VGRspftgWTLRTLLATTHIPLKEVPQALTPQLMTAKLELLLTCLAQDFGISNPSVAIAGLNPHSGEEGKLGSEEQDWLI....................-PWLEQARKKYPQAQLI.....G.....PIPPDTMWVGPgkawltdgQTTVS-.-DAYLALYHDQGLIPVKLLAF.DQAINTTIGLPFVRTSPDHGTAFDIAGQG.IARADSLIAAIKLAA |
| PDXA_AQUAE/23-314 | I--SKH--FKEKF.TYVIYGEEKTL..LEASKLTGIK.L.........NYKKIEKVE.EAKER--GVY.LIDLNVL.KV......P.VV........E.PSVS--SGKAAVAYLARAVADAIRGNIHGILTMPINKFWAKKA....GFQYEGQTEFLAK......ASG.....-TK.....DYAMMM.YSE.....-KLKVVLLTTHIPLKDVPNYVKKEEILKKVRLIRKEFLEKF-KFEPLIKVLGLNPHAGEMGELGREEIEEII....................-PAVEEAK--KEGIKVV.....G.....PLVPDVAFINP........SEE---.-DVFLCMYHDQGLIPFKMLAF.DEGVNFTLGLPFIRTSPDHGTAYDIAWKN.KARESSSLHALRLIE |
| PDXA_BACHD/25-325 | ALNKKE--LYDVA.NPVVIGHGDML..EKMLPVMKAD.L.........TINRITTVD.EAMFEYGTID.VIHLDNL.NV......AeVK........M.GTVQAQCGKAAFEYIRHAVQLANDKKVDALATTPINKESLKAA....EVPYIGHTEMLAD......LTK.....-TE.....DPLTMF.EVH.....-SMRIFFLTRHLSLKDAIDQMTKERVHDYLLRCDKAL-EKLGVKERRFAVAGLNPHSGENGLFGREEMDEIT....................-PGIELAK--KDGINAV.....G.....PVPADSVFHHA........LNGRY-.-DAVLSLYHDQGHIAAKMTDF.ERTISITNGLPFLRTSVDHGTAFDIAGKG.IASTVSMEECIKLAA |
| P94285_BURCE/3-246 | A--SGR-------.-IVVLD-----..---------P.L.........DLAPHE---.----------.-------.--......-.YV........T.GQPSAAAGRAVVRWMALADRIAHDGLIGGWIMGPIDSTSLKLA....-----GEVASIDE......LQP.....-EH.....SF-MFR.MSG.....-RLRVVPLTEHIPLRDVPATVTFDAVLNLVTLVNERLKD-WGIEAPRIGVAGLNPHA-----MF-EEEERII....................GPAVEQAR--AQGIDVR.....G.....PVSPDSVFRHG........LDGRY-.-DAVVSMYHDQGQIALKSAAF.EGACTLYLGVPYVRATVPHGTAMGIAGRN.LAQHHSMVAALRTAA |
| PDXA_SPHAR/30-319 | A--LADGAVHTDS.IPVLVGSAAAV..ERALDFTGTK.A.........RLRVMRGFE.KPSDDPAIID.VIDTGAL.PD......G.VLp.......L.GEDTEAAGHATAQWLDELDALARDGSFAATIMGPISTGSLKLA....K-----KLDRVIS......PTP.....-GE.....SYLVLL.-TG.....-PLRVAHLTDHMSLRQVIDVISADLVATAVGQLHEAMQS-WGIAQPRIAVAGLNPHA-----MGDEDRLEIA....................-PGIEAAR--ARGIDVE.....G.....PIAPDSVFRHC........IEGRY-.-DMVLAMFHDQGHIAVKTWGFsGNSV-IIMGPPYLHMSVAHGTAYDIVGTG.KADAAMMLSAMRTCG |
| PDXA_CAMJE/22-358 | S--HEE--LSKIC.TPFYFIHESLL..NKALKLLNLK.LfnakivafkDDKDYEFNF.IKKENSLEIYsFCLPLGF.KVde..nfE.IQ........A.GEIDAKSGLYGFLSFKAASYFVYEKHAHALLTLPIHKKAWEDA....GLKYKGHTDALRD......FFK.....--K.....NAIMML.GCK.....-ELFVGLFSEHIPLAKVSKKITFKNLSIFLKDFYKETHFKK------MGLLGFNPHAGDYGVIG-GEEEKIMekaiafvnaflhskkdekffKKALKDEN--LQKELLLnfkgkGvylpyPLVADTAFTKT........GLKNC-.-NRLVAMYHDLALAPLKALYF.DKSINVSLNLPIIRVSVDHGTAFDKAYKNaKINTKSYFEAAKFAI |
| PDXA_HELPY/24-307 | S--HKE--VSALC.EPLYLTDGELL..ERANQLLHNA.Y.........ETKVLN---.-------ALA.IDAPLPL.LN......S.ST........I.GKVSAQSGAYSFESFKKACELADSKEVDGICTLPINKLAWQQA....QIPFVGHTDFLKQ......RYK.....-DH.....QIIMML.GCS.....-KLFVGLFSDHVPLGAVSQLIQVGALVKFLLAFQKSTQAKI------VQVCGFNPHAGEEGLFG-EEDERIL....................-KAIQKSNQTLGFECFL.....G.....PLPADSAFAPN........KRKIT-.-PFYVSMSHDVGLAPLKALYF.DESINVSLNAPILRTSTDHGTAFDIAYQN.KANNKSYLNAIKYLA |