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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF04104 - DNA_primase_lrg)
Eukaryotic-type DNA primase, large subunit
(
Pfam
reference: accession no.
PF04104
)
(
Interpro
reference: accession no.
IPR007238
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
15 sequences @ 454 aa
(ave. pairwise identity: 0.18)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 19.18)
nucleotides
(available for above)
14 sequences @ 1362 bp
(ave. pairwise identity: 0.34)
New Hampshire format
(total tree length: 10.26)
amino acids, restricted set
(corresp. to available nt seqs)
14 sequences @ 454 aa
(ave. pairwise identity: 0.18)
New Hampshire format
(total tree length: 18.92)