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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04095 alignment
(18 sequences with 321 aa)


Y037_MYCPN/201-445 FQCHDFSMRGMSSLQSALYVAN---------..AHLQYFSGSDTILGG----------.-VAAKSILASEHSVMCADGQEGELNTFKRLLEQFPNKN--LSLVIDSYDMWHVLD-.-NILPQLKDLVLQRQEK---------------LYLRPDSGNFETLICQGkrFnPEDKtTWGVIDYLDYHFGSTVNQKGYKVLNQKLGIVYGDGITYERIEYILEQLKQRGFCSSNIVFGVGSTTYQNLNRDTLGFVYKLTAIKKGNTWHDVTKSPITDPT.KQSIGGR----------------------..--------FDNPN
Y037_MYCGE/202-445 FQCHDFSMRGMSSLQSALYVAR---------..AHLQYFTGSDTILGG----------.-DNSRSILASEHSVMCADGSKHELKTFQRLLEKFKDKK--LSLVIDSYDMWNVLD-.-NIIPRLKNLILMRGAT---------------LYLRADSGNYQTLICNPn.YkKQDKsTWAMIDYLDHHFSSTINKKGYKVLNKKIGIIYGDGITYQKIEWILNCLKNHGYCSSNIIFGVGSSTYQNLNRDTLGFVYKLTAIKRNNRWIGVKKTPITDLS.KSSKGGR----------------------..--------YKTKR
Q9APM3_HAEDU/191-455 FQSHDFSMRGMSSLESAETSGA---------..GHLTSFLGTDTIPALSFVEAYYGSS.SLIGTSIPASEHSVMSSHGVD-ELSTFRYLMAKFPH--NMLSIVSDTTDFWHNIT-.-VNLPLLKQEIIARPEN--AR-----------LVIRPDSGNFFAIICGDp.TaDTEHeRKGLIECLWDIFGGTVNQKGYKVINPHIGAIYGDGVTYEKMFKILEGLQAKGFASSNIVFGVGAQTYQRNTRDTLGFALKATSITINGEEKAIFKNPKTDDGfKKSQKGR----------------------..VKVLSRDTYVDGL
PBEF_HUMAN/188-466 YKLHDFGYRGVSSQETAGIGAS---------..AHLVNFKGTDTVAGLALIKKYYGTKdPVPGYSVPAAEHSTITAWGKDHEKDAFEHIVTQFSSVP--VSVVSDSYDIYNACEK.-IWGEDLRHLIVSRSTQ--AP-----------LIIRPDSGNPLDTVLK-..-.----.---VLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQKMWSIENIAFGSGGGLLQKLTRDLLNCSFKCSYVVTNGLGINVFKDPVADPN.KRSKKGRLSLHRTPAGNFVTLEEGKGDLEeyGQDLLHTVFKNGK
Q9U0E5_SUBDO/172-448 SKLHDFGFRGSTSIESAGIGGA---------..AHLVNFRTTATIASLSVPRDYYGFT.GMAGYGTPAAEHSTVTSWSKDREVDAFRNMLESFLLGE--WLCVSDSYNIWDACEK.-LWGEELKDLVEDRGRRGAGP-----------LVVRPDSGDPPTVVVK-..-.----.---VLDILESKFGTRTNSKGYKVLPDYLRVIQGDGISYESLSGILQHMKLNKWSADNLAFGSGGGLLQKVHRDTQKCAYKCSYAVINGKGVNIFKDPITDHG.KLSKKGRITLELDESGQFVTRTEGTGDPD..-KDLLVTVFENGE
Q55929_SYNY3/170-437 FKLHDFGARGVSSGESSGIGGL---------..AHLVNFQGSDTVKALVYGQQYYNCP.-MAAYSIPAAEHSTITAWGREGEVLAYENMLTQFAKPGSVLAVVSDSYDLWNAIDH.-LWGDHLRAQVLDSGAT---------------VVIRPDSGDPVAIVAQ-..-.----.---TLERLEACFGSTLNSKGFRVLN-AVRVIQGDGVDEESISAILEKTESLGFSTTNLAFGMGGALLQKVNRDTQKFAMKCSEVTVEDKAIPVYKDPVTDPG.KTSKKGRLSLVKTDSG--------YGTVPtsSEDLLQVVYENGH
Q9RXL6_DEIRA/175-448 FKLHDFGSRGVSSRESAGIGGL---------..AHLVNFQGSDTLEALRVGRNYYGAE.-LAGFSIPAAEHSTITSWGKEHEVDAYRNMVRQFGKPGKVYAVVSDSYDLKHAINV.-HWGETLRKEVEESGGT---------------LVVRPDSGDPPAMVRL-..-.----.---AVNALAAKYGTTTNSKGFKVLQ-HVRVIQGDGIDESTIRQILQNLYVDGFSAENVTFGMGGALLQKVDRDTQRFAYKASAGLIDGEYRGIYKDPVTDPG.KRSKDGVLDLVEENGRMVTRQYRTFDTDF..PGSLMRTVYRDGE
Q9CM44_PASMU/173-446 FKLHDFGARGASSLETVALGGL---------..AHLVNFMGTDSVSALVAAKRWYNTT.SMPAFSIPAAEHSTMTSWGKDREADAYRNMVEQFAGEHKIYAVVSDSYDLWNALEN.-IWGTQLKDLVEIKGGT---------------LVVRPDSGDPAEVVCR-..-.----.---TLAILAEKFGTTLNSKGYKVLPDCVRLIQGDGINVNSLGKILEAILASGFSVENVAFGMGGGLLQQVNRDTMSWAMKASAVCIAGEWHDVYKDPITSQA.KRSKRGVLALVKQENRWHTIEQKALGQQ-..-KNQLRTVFLNGE
NPT1_SCHPO/165-409 CAFTDFGTRRRRDPHTQEIVLQGLMKAQEDF..KGPGSFLGTSNVYF-----------.-AAKYNLNVSGTVAHEWYMGIAAITQ---NYKQANR---------IASLKWVQTFG.TSLLIALTDTFSTDVFLKSFTANSADDLANVFHGVRQDSGCAEE-----..-.----.---YIEKVVKHYKSI-GVDPS-----TKVIVHSDALNVDRCIELYKYCEKCGI---KSAFGIGTNLTSDFQK-VSNPSEVSKPMNIVIKLFSAEGTKAVKIS.DDIMKNT------------------GDRD..AVIQAKHQLCLPI
NPT1_YEAST/172-416 IRFSEFGTRRRRSLKAQDLIMQGIMKAVNGNpdRNKSLLLGTSNILF-----------.-AKKYGVKPIGTVAHEWVMGVASISE---DYLHANK---------NAMDCWINTFGaKNAGLALTDTFGTDDFLKSFRPPYSD----AYVGVRQDSGDPVE-----..-.----.---YTKKISHHYHDVLKLPKF-----SKIICYSDSLNVEKAITYSHAAKENGM---LATFGIGTNFTNDFRK-KSEPQVKSEPLNIVIKLLEVNGNHAIKIS.DNLGKNM------------------GDPA..TVKRVKEELGYTE
PNCB_RHILO/189-426 IRISDFGTRRRHSFLWQRWCVEALKE-----..GIGEAFTGTSNVLL-----------.-AMDNDLEALGTNAHELPMVFAALANSEKELKQAPY---------KVLQDWQRYYG.GNLLIVLPDAFGTASFLRDAP-----DWVADWTGFRPDSAPPIE-----..-.----.---GGEKILSWWRER-GKDPK-----QKLLIFSDGLEVETIEETYRHFKG-KV---RMSFGWGTNLTNDFEGCAPTETNSLDAISLVCKVTEANGRPAVKLS.DNPAKAT-----------------GDEKE..-IERYLRIFGEKD
PNCB_VIBCH/177-412 FSLTEMGTRRRFSSQVQRDVLACLKQ-----..EIPQWVLGTSNYHF-----------.-AREFDLKPIGTIAHEWFMGHQALV----NERDSQQ---------VALERWLTAFD.GMLAIAPTDTLTIDAFLNDFNRHLAN----AYDGVRHDSGCPFR-----..-.----.---WGDKMIAHYQQL-GIDPT-----TKLFIFSDGLDFDQALELCEYFAG-RV---KISFGIGTFLTNDLANWRNAAGVEYRPLSIVIKLAECQGRPVAKIS.DQPEKAM-----------------CEDPI..FLANLKRRFNIEL
PNCB_XYLFA/165-392 CSIADYGTRRRYSRQWHAELLPLLAQ-----..GLGSNFVGTSNVYF-----------.-AKQYGYTPLGTMAHEYLQAFQALGP---RLRDSQV---------AGLEAWAREYR.GDLGIALSDVVGLDAFLGDFDLYFCK----LFDGMRHDSGDPFK-----..-.----.---WGERIIMHLESH-RIDPR-----TKVLVFSDGLDMNKVMRLYQHFRG-RC---RLAFGVGTSLTNDLGP---------TPLQIVIKMVRCNGQPVAKLS.DSPGKSM-----------------CDDPA..YLHYLRQVFGVSA
PNCB2_PSEAE/171-398 FKMADFGTRRRFSYRVHEAVVSGLKE-----..DFPGCFVGTSNVHL-----------.-ARKLDLKPLGTMAHEWLMAHQQLGP---RLIDSQS---------AALDCWVREYR.GLLGIALTDCITTDAFLRDFDLYFAK----LFDGLRHDSGDPLL-----..-.----.---WAEKTIAHYLKL-GIDPL-----TKTLVFSDGLDLPRALKIYRALQG-RI---NVSFGIGTHFTCDLPG--------VEPMNIVVKMSACNGHPVAKIS.DTPGKAQ-----------------CRDPD..FIHYLKHVFQVA-
PNCB1_PSEAE/171-399 FQVADFGTRRRFSYRTQEEVVHILKR-----..DFPGRFVGTSNVHL-----------.-AREYDLKPIGTMAHEWLMAHQQLGP---RLVDSQQ---------AALDCWVREYR.GQLGIALTDCITMDAFLDDFDLYFAK----LFDGLRHDSGDPLA-----..-.----.---WAEKAIAHYRRL-GIDPL-----SKTLVFSDGLDMPKALQLFRALRG-KI---NVSFGIGTNLTCDIPG--------VEPMNIVLKMTACNGHPVAKIS.DAPGKTQ-----------------CRDEN..FVAYLRHVFNVPA
PNCB_ECOLI/168-394 FHLMDFGTRRRFSREVQETIVKRLQQ-----..--ESWFVGTSNYDL-----------.-ARRLSLTPMGTQAHEWFQAHQQISP---DLANSQR---------AALAAWLEEYP.DQLGIALTDCITMDAFLRDFGVEFAS----RYQGLRHDSGDPVE-----..-.----.---WGEKAIAHYEKL-GIDPQ-----SKTLVFSDNLDLRKAVELYRHFSS-RV---QLSFGIGTRLTCDIPQ--------VKPLNIVIKLVECNGKPVAKLS.DSPGKTI-----------------CHDKA..FVRALRKAFDLPH
PNCB_BUCAI/169-396 LKIVDFGTRRRFSYDVQYSIVKRLKE-----..-SFPFLIGSSNYHI-----------.-ARILKIKPVGTQAHEWFQAHQQIGS---NLKNSQI---------LALQKWLYQYK.NHLGIALTDSITMDAFLDDFNLHFAS----FYQGIRHDSGDPVK-----..-.----.---WGEKALKHYEKL-GIDPC-----TKTLLFSDNLDFKKIISLYKKFHK-KI---NVIFGIGTKLTCDIPY--------VKPLNIVIKLVECNGKPVAKIS.DSPGKTF-----------------CLDRI..FLKNLCQVFNVSL
O23191_ARATH/174-402 KLLLEFGARRA---QGPDGAISASKY-----..CYLGGFDATSNVAA-----------.-GKLFGIPLRGTHSHAFVSSFMSLDEIVDKVLRSSDGKSTCKDFICLVQTCLTKIQ.-VMKSGIPNFCAVALALNELG--------YKAVGIRLDSGDLAY-----..-.----.---LSTEVRKFFCAI-ERDLKVPDFGKMIVTASNDLNEETVDALNKQGHE------VDAFGIGTNLVTCYAQ---------AALGCVFKLVEINNQPRIKLS.EDVTKVS----------------------..-IPCKKRTYRLFG