EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04089 alignment
(16 sequences with 327 bp)


TNMD_RAT/93-186 GGAAATGGCACCGATGAAACATTGGAAGTCCATGACTTTAAAAACGGATACACTGGCATCTACTTTGTAGGTCTTCAAAAATGCTTTATTAAAACTCAAATCAAA---GTGATTCCTGAATTTTCTGAACCAGAAGAGGAAATAGATGAGAATGAAGAAATTACTACAACGTTCTTTGAACAG------------------------------------TCAGTGATTTGGGTTCCTGCAGAAAAGCCTATTGAAAACAGAGAC------TTCCTGAAAAATTCTAAAATTCTGGAGATTTGCGACAATGTGACTATGTACTGGATC
LECT1_HUMAN/104-201 GGAAGTGGAGCTGAAGAAGCAATTGCAGTTAATGATTTCCAGAATGGCATCACAGGAATTCGTTTTGCTGGAGGAGAGAAGTGCTACATTAAAGCGCAAGTGAAGGCTCGTATTCCTGAGGTGGGCGCCGTGACCAAACAGAGCATCTCCTCCAAACTG---------------GAAGGCAAGATCATGCCAGTCAAATAT---------GAAGAAAATTCTCTTATCTGGGTGGCTGTAGATCAGCCTGTGAAG------GACAACAGCTTCTTG---AGTTCTAAGGTGTTAGAACTCTGCGGTGACCTTCCTATTTTCTGGCTT
LECT1_CHICK/103-200 GGAAGCGGGAGTGAAGAGGCTGTTGAAGTTCATGATTTCCAGATTGGCATCACCGGCATCCGATTTGCTGGAGGAGAGAAGTGTTACATCAAGGCCCAGCCCAAAGCTCGTGTGCCTGAGGTGGATGCCATGACCAAGGCCAGCCTGTCCTCTGACCTGGAAGATGAAATCATGCCTGTTAGATTT------------------------GACGAAAACTCTCTTATCTGGGTGGCTGCAGACGAGCCCATCAAG------CACAACGGTTTCCTA---AGCCCCAAAATTTTAGAGCTTTGTGGGGATCTTCCGATTTTCTGGCTT
LECT1_BRARE/75-157 GATTCTGCAGAGGGGACGATCGTGGAAGTTCAAGACTTTAAAGCTGGCATCACCGCCGTCAAGTTTCCCGGAAAAGAGAAATGCTTCATCAAATCACAAGCTAGAACTGAACTTTCTGAGGATGAAGCCGGAGTGAAAGCT---------------------------------------------------------------------GAGGTGGCGTCTTTGGTCTGGATCACTTCAGAAGAGCCACTGAAG------GACAGCAGCTTCCTG---AGCCCCGAAATACTGCGATTCTGTGCAGATCTGCCCATTTACTGGCAC
PSPC_RABIT/94-188 TTCCCCATCGGCTCCACCGGCATTGTCACCTGCGACTACCAGCGGCTCCTGATCGCCTATAAGCCAGCCCCGGGAACCTGCTGCTACCTCATGAAGATGGCTCCAGACAGCATCCCCAGTCTGGAGGCTCTGGCTAGAAAATTCCAG---------------------------GCCAACCCTGCAGAGCCTCCCACTCAGCGGGGCCAG------------GACAAGGGGCCAGCCGCAGGCCCGGCGTCCTCCGGAGGAGAGCTGGCCTTCCTG---GGCGCGGCCGTGAGCACCCTGTGTGGGGAGGTGCCTCTCATCTACATC
PSPC_RAT/95-194 TTCTCTATTGGCTCCACTGGCATCGTTCTATATGACTACCAGCGGCTCCTGACCGCCTATAAGCCAGCTCCAGGAACCTACTGCTACATCATGAAGATGGCTCCAGAGAGCATCCCTAGTCTTGAGGCTTTGGCTAGAAAATTCAAGAAC------------------TTCCAGGCCAAGTCCTCCACACCCACCTCTAAGTTGGGCCAGGAAGAAGGGCACAGTGCTGGATCCGATTCTGATTCTTCTGGGCGA------GACCTGGCTTTCCTG---GGCCTTGCTGTGAGCACCTTGTGTGGAGAGCTACCACTGTACTATATC
PSPC_HUMAN/94-197 TTCTCCATCGGCTCCACTGGCCTCGTGGTGTATGACTACCAGCAGCTGCTGATCGCCTACAAGCCAGCCCCTGGCACCTGCTGCTACATCATGAAGATAGCTCCAGAGAGCATCCCCAGTCTTGAGGCTCTCAATAGAAAAGTCCACAACTTCCAGATGGAATGCTCTCTGCAGGCCAAGCCCGCAGTGCCTACGTCTAAGCTGGGCCAG------------GCAGAGGGGCGAGATGCAGGCTCAGCACCCTCCGGAGGGGACCCGGCCTTCTTG---GGCATGGCCGTGAACACCCTGTGTGGCGAGGTGCCGCTCTACTACATC
ITMB_CHICK/132-226 TTTGCTGATAGCGATCCTGCTGACATCGTCCACGATTTCCATCGGAGACTGACTGCCTATCTTGACCTGAGCCTGGATAAGTGCTACGTAATCCCTCTGAACACCTCAGTTGTGATGCCACCGAAAAACTTCTTGGAGCTGCTCATCAACATCAAGGCTGGA------------------ACATATTTGCCTCAGTCCTATTTGATTCAC---------------GAGCAGATGATTGTTACCGATCGCATTGAA------AATGTGGATCAGTTG---GGATTCTTTATTTACCGCCTCTGCCGTGGCAAGGAAACCTACAAGCTG
ITMC_HUMAN/136-230 TTTGGCGGCGGTGACCCTGCAGACATCATCCATGACTTCCAGCGGGGTCTGACTGCGTACCATGATATCTCCCTGGACAAGTGCTATGTCATCGAACTCAACACCACCATTGTGCTGCCCCCTCGCAACTTCTGGGAGCTCCTCATGAACGTGAAGAGGGGG------------------ACCTACCTGCCGCAGACGTACATCATCCAG---------------GAGGAGATGGTGGTCACGGAGCATGTCAGT------GACAAGGAGGCCCTG---GGGTCCTTCATCTACCACCTGTGCAACGGGAAAGACACCTACCGGCTC
ITMA_HUMAN/133-227 TTCTCTGATAGTGACCCTGCAGCAATTATTCATGACTTTGAAAAGGGAATGACTGCTTACCTGGACTTGTTGCTGGGGAACTGCTATCTGATGCCCCTCAATACTTCTATTGTTATGCCTCCAAAAAATCTGGTAGAGCTCTTTGGCAAACTGGCGAGTGGCAGATATCTGCCTCAAACTTATGTGGTTCGAGAAGACCTAGTT---------------------------------GCTGTGGAGGAAATTCGT------GATGTTAGTAACCTT---GGCATCTTTATTTACCAACTTTGCAATAACAGAAAGTCCTTCCGCCTT
Q9VPT9_DROME/172-267 TTCAAGGATGGACGTCGTGGTCGCTTCATGCACGACTTCAAGGAGAACCAGTCGGCCATTATCGACACTACCACCGGACGGTGCTTCATCATGCCCTTGGATCGGGACACGACCCTGCCCCCGACCAGCTTTGTGGATCTCATAAAGAAGATGAGCACTGGCTACTACAACATAGATACGGAGCGCGTGCGGCGCCAGATGCGTGTG------------------------------GTCATGCCCCGCATCACC------GATGTCTCGCTCATC---TCGGAGCGGATTGCCAACGAGTGCTTCGATATGAAGGTCTACATGATG
Q17302_CAEBR/170-270 TTTGGATCTAACCGACCCGCGATCTTCTTGCACGATTTCAAACAGAACCTCACCGCTATTGTTGATACTGTTGGAAACCGTTGCTTTGTCAAGGATTTGGACAGAACCAAGATCCGAAGCCCAAGAATGCTTATTGAGATGCTCAGAAACATTGATATCATGGCCCCAGAAGTAGCCTACGCTCAAACTCGCATGGTCCGAGAAACATAC------------------------AACGTTGGGGATGAGCTCACCAAGGCCGATATCAGCACATTCAACAGTACCATTCTCTCGCGTCACTGTGCTTTCCGTCAAACATACAAGCTT
Q9D0T7_MOUSE/63-155 AACAGCGTTCAGAGTGAATGGGATGGAGTCATGGACTACAAGAACGACCTCCTGGCAGCTAAGCTGTTTAGCAAGATGGCCTGTGTTCTGGCAAAGATGGACCCAGCAGCCTTCCCAAGTTTGGATGATATTACCCAGGCCCTGGGCAAACAGGCTTCCGGTCACTACCCACCTACTCGAGGA---------------------------------------CTGACCTACACAGTTTTACCCAGCCGAATCAAA------AACTTGGCCCAATAC---GGAGTGCCAATCAAAGACCTGTGCAGAGCCGTCCCCACCTACTTTGCT
GKN1_MOUSE/54-148 AATAACGGCTGGGACTCCTGGAATAGCCTCTGGGACTATGAAAACAGTTTCGCTGCCACGAGACTCTTCTCCAAGAAGTCATGCATTGTGCACAGAATGAACAAGGATGCCATGCCCTCCCTTCAGGACCTCGATACAATGGTCAAGGAACAGAAGGGTAAAGGGCCTGGAGGAGCT---------------------------------CCTCCCAAGGACTTGATGTACTCCGTCAACCCTACCAGAGTGGAG------GACCTGAATACATTC---GGACCAAAGATTGCTGGCATGTGCAGGGGCATCCCTACCTATGTGGCC
GKN1_HUMAN/54-150 AACAACGGATGGGACTCCTGGAATTCCATCTGGGATTATGGAAATGGCTTTGCTGCAACCAGACTCTTTCAAAAGAAGACATGCATTGTGCACAAAATGAACAAGGAAGTCATGCCCTCCATTCAATCCCTTGATGCACTGGTCAAGGAAAAGAAGCTTCAGGGTAAGGGACCAGGAGGACCA---------------------------CCTCCCAAGGGCCTGATGTACTCAGTCAACCCAAACAAAGTCGAT------GACCTGAGCAAGTTC---GGAAAAAACATTGCAAACATGTGTCGTGGGATTCCAACATACATGGCT
Q9CQS6_MOUSE/54-151 CACTCAGGCTCGTGCTCCTCCACCACGATTTTTGACTATAAGCATGGTTACATCGCATCCCGGGTGCTCTCCCGGAGAGCCTGTTACGTCATCAAGATGGACCACAAAGCCATCCCTGCTCTGGACAAACTCCAACGGTTCCTCTACGAGAAGCAGACAATGAATGCTATCGACTCCCCAGAGTATACC------------------------------TGGGTCAGGTACAACCCTCTGAAGTCTCTGATCACGAAGGTGGACTGGTTCCTGTTT---GGGTCGCCTATTCGACAGCTATGCAAGCACATGCCCCTGTATGAGGGT