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Protein and Associated NucleotideDomains with Inferred Trees

PF04082 phylogeny
for nucleotide alignment


 
((((((((GRT1_SCHPO/250-346,(STB4_YEAST/512-609,YL78_YEAST/417-509)),(Q08904_YEAST/246-350,YKW2_YEAST/291-392)),((((QUTA_EMENI/365-458,(Q9HDX1_SCHPO/205-304,O59746_SCHPO/280-378)),((((Q9P8C5_TOLIN/350-449,(NIT4_NEUCR/340-432,NIRA_EMENI/315-413)),Q9Y7D7_ASPTE/307-402),(YAO7_SCHPO/249-344,((O94569_SCHPO/265-361,O94573_SCHPO/261-353),YKM1_SCHPO/264-360))),((YHDD_SCHPO/261-357,CHA4_YEAST/307-407),((O74541_SCHPO/256-354,O74915_SCHPO/283-383),TEA1_YEAST/413-514)))),(PRIB_LENED/299-400,(Q9HFM7_PICAN/256-357,O93984_PICAN/225-321))),(QA1F_NEUCR/372-465,(YL66_YEAST/280-384,((((ACU15_NEUCR/293-389,(O13414_ASPNG/290-386,O13461_EMENI/292-388)),(CAT8_YEAST/518-619,(O74229_KLULA/617-718,Q9P8P8_CANAL/506-614))),((((((O42805_EMENI/330-424,O94490_SCHPO/385-477),((O94278_SCHPO/428-529,THI1_SCHPO/339-435),O14130_SCHPO/352-448)),(PUT3_YEAST/457-553,(O60130_SCHPO/292-384,(YJU6_YEAST/285-381,YIN0_YEAST/342-439)))),((STB5_YEAST/392-492,PPR1_YEAST/437-533),((GAL4_YEAST/322-416,LAC9_KLULA/467-562),(YAKB_SCHPO/305-404,Q9UTN0_SCHPO/286-381)))),Q9HG15_COLLN/276-374),Q9HE23_NEUCR/497-602)),(CTF1A_FUSSO/337-431,CTF1B_FUSSO/342-437)))))),((SEF1_KLULA/410-512,SEF1_YEAST/421-524),((PDR3_YEAST/425-524,(PDR1_YEAST/462-563,YE14_YEAST/310-410)),(Q12180_YEAST/469-565,YB00_YEAST/464-556)))),((((YFF2_YEAST/159-259,(MAL13_YEAST/169-269,MAL33_YEAST/164-264)),Q9UVH4_SACPS/164-264),MAL63_YEAST/166-267),(DAL81_YEAST/397-491,(Q9P7H9_SCHPO/387-482,Q9UTA7_SCHPO/313-409)))),SUC1_CANAL/166-265),XLNR_ASPNG/481-576),O60201_ASPOR/256-356,Q9Y8A1_ASPNG/254-354);
((((((((GRT1_SCHPO/250-346:0.96520,(STB4_YEAST/512-609:0.70570,YL78_YEAST/417-509:0.43099):0.14105):0.06871,(Q08904_YEAST/246-350:0.73351,YKW2_YEAST/291-392:0.83932):0.07429):0.09123,((((QUTA_EMENI/365-458:0.58749,(Q9HDX1_SCHPO/205-304:0.66342,O59746_SCHPO/280-378:0.50024):0.10316):0.18552,((((Q9P8C5_TOLIN/350-449:0.15403,(NIT4_NEUCR/340-432:0.17973,NIRA_EMENI/315-413:0.33195):0.09833):0.29681,Q9Y7D7_ASPTE/307-402:0.72578):0.12299,(YAO7_SCHPO/249-344:0.15936,((O94569_SCHPO/265-361:0.29968,O94573_SCHPO/261-353:0.17603):0.10873,YKM1_SCHPO/264-360:0.22456):0.21406):0.40323):0.04077,((YHDD_SCHPO/261-357:0.50638,CHA4_YEAST/307-407:0.21555):0.14502,((O74541_SCHPO/256-354:0.28142,O74915_SCHPO/283-383:0.26970):0.13826,TEA1_YEAST/413-514:0.31994):0.06376):0.22518):0.04051):0.03965,(PRIB_LENED/299-400:0.77414,(Q9HFM7_PICAN/256-357:0.50635,O93984_PICAN/225-321:0.43737):0.26254):0.12594):0.13137,(QA1F_NEUCR/372-465:0.84627,(YL66_YEAST/280-384:0.99978,((((ACU15_NEUCR/293-389:0.26898,(O13414_ASPNG/290-386:0.12573,O13461_EMENI/292-388:0.21336):0.26826):0.24872,(CAT8_YEAST/518-619:0.27762,(O74229_KLULA/617-718:0.24666,Q9P8P8_CANAL/506-614:0.32260):0.07786):0.50451):0.23209,((((((O42805_EMENI/330-424:0.51431,O94490_SCHPO/385-477:0.41120):0.10237,((O94278_SCHPO/428-529:0.65921,THI1_SCHPO/339-435:0.31980):0.20066,O14130_SCHPO/352-448:0.25735):0.16266):0.23257,(PUT3_YEAST/457-553:0.57102,(O60130_SCHPO/292-384:0.58989,(YJU6_YEAST/285-381:0.19759,YIN0_YEAST/342-439:0.44508):0.25568):0.04672):0.06346):0.10638,((STB5_YEAST/392-492:0.48309,PPR1_YEAST/437-533:0.49987):0.15348,((GAL4_YEAST/322-416:0.47419,LAC9_KLULA/467-562:0.57281):0.15220,(YAKB_SCHPO/305-404:0.39265,Q9UTN0_SCHPO/286-381:0.68158):0.09914):0.10710):0.07173):0.07522,Q9HG15_COLLN/276-374:0.64914):0.06911,Q9HE23_NEUCR/497-602:0.57510):0.05575):0.05735,(CTF1A_FUSSO/337-431:0.42307,CTF1B_FUSSO/342-437:0.30847):0.25808):0.04232):0.02656):0.07324):0.11281):0.12019,((SEF1_KLULA/410-512:0.18138,SEF1_YEAST/421-524:0.25823):0.77310,((PDR3_YEAST/425-524:0.34580,(PDR1_YEAST/462-563:0.59973,YE14_YEAST/310-410:0.69896):0.06782):0.43714,(Q12180_YEAST/469-565:0.30196,YB00_YEAST/464-556:0.46466):0.17817):0.05503):0.11515):0.09558,((((YFF2_YEAST/159-259:0.21305,(MAL13_YEAST/169-269:0.12435,MAL33_YEAST/164-264:0.23250):0.10821):0.06657,Q9UVH4_SACPS/164-264:0.14058):0.08346,MAL63_YEAST/166-267:0.01561):0.52249,(DAL81_YEAST/397-491:0.59759,(Q9P7H9_SCHPO/387-482:0.25700,Q9UTA7_SCHPO/313-409:0.31803):0.25681):0.26963):0.13513):0.05261,SUC1_CANAL/166-265:0.62520):0.22632,XLNR_ASPNG/481-576:0.84854):0.31937,O60201_ASPOR/256-356:0.08418,Q9Y8A1_ASPNG/254-354:0.27054);