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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF04054 - Not1)
CCR4-Not complex component, Not1
(Pfam reference: accession no. PF04054)
(Interpro reference: accession no. IPR007196)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
6 sequences @ 415 aa
(ave. pairwise identity: 0.43)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.57)
nucleotides
(available for above)
6 sequences @ 1245 bp
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 2.76)
amino acids, restricted set
(corresp. to available nt seqs)
6 sequences @ 415 aa
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 3.57)