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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04053 alignment
(14 sequences with 480 aa)


Q9U5J8_9TRYP/320-777 N-DVRRVDAKGIPAD-.--VTDGDVLALPSKEMGTLESRPTAIVYGPSGQFVAALG---ESDFTILSSLSMRSKAFGKCMSFVWGPDNGSYAVMLSPREVRIY-KNFKDRG.-AISLVDSAERLFAGPLLGVCTASSLAFYDWATLSFIRQIDESPKAVQWTENGEFVAIVTDS.-----AFFTLRFNSDDVVDYFDAHDSTPEEGLDFAFEVVEEVMESAKEVLWVSNCVVFINQAHRLCYYVA-GEINSIAVVSRDQYLLGYLPKENRVLCIDKDLNITSYLIPLGIIECMTAVARGDLVAVQALVPPLGAREK.-LLVARFLQSRKYLELALEVTSEDDHRFELALQLGRLTMAEEIAKQSGSVGHWKQLADVALTKGAFQLAKEALCKCGDSNGLLLLYSCVGDMEAISKLGDTCVANGRLNIAFTCFHLTRRYADNVDLLCRTGKLAEAAFYARTH-.CHGKVDEVVEKWKLGLV
Q9C827_ARATH/319-779 HNEIQTANIKSIGADY.-EVTDGERLPLSVKELGTCDLYPQSLKHNPNGRFVVVCG---DGEYIIYTALAWRNRSFGSGLEFVWSSE-GECAVRESSSKIKIFSKNFQEKR.-SIRPTFSAEKIFGGTLLAMCSSDFICFYDWAECRLIQRIDVTVKNLYWADSGDLVAIASDT.-----SFYILKFNRDLVTSHFDSGRPTEEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNSSWKLNYCVG-GEVTTMYHLDRPMYLLGYLASQSRVFLVDKEFNVIGYTLLLSLIEYKTLVMRGDLDKASE-ILPTIPKDQ.HNSVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAQEIAVEVQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESNRIPEAALMARSY-.LPSKVSEIVALWRKDLS
COPP_CAEEL/319-777 HSEIQQANLKTISTEEsEAIQDGERLPLSVKDLGSSEIYPQTLAHSSNGRFVVACG---DGEYIVYTAMALRNKDFGQGLEFVWAVDPNMFAVRESATNVKIK-KNFKDHK.-SIRSDMVLEGISGGPLLALRSNNSLCFFDWESAVLVRRIEITSKSIYWSDNGEMVAICGDD.-----SFYVLKYSAEAVANATE----VTEDGIEDAFEVIGEQAEAVKTGFWIGDCFIFTTALNRINYYVG-GEIVTIAHVDRPLYLLGYMAKESRVYAVDKDLNVISYKLLLSVLEYQTAVMRRDFDTADK-VLTTIPKEQ.RTRVAHFLEKQGFKKQALAVSQDPDHKFDLSVALGDLKTAYDLALQSDSEEKWKALSNAATLKSELLLAGECLGRARDFGGLMLLATCAGSAPLLQKLADDSAAAESHNISFLSSLLLGDIDACLDKLISTGRLPEAAFLARTH-.APSRVSSILELWKAKAS
COPP_BOVIN/318-777 HSEVQQANLKAMGD--.AEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVCG---DGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIF-KNFKEKK.-SFKPDFGAESIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIATEE.-----SFFILKYLSEKVLAAQETHEGVTEDGIEDGFEVLGEIQEIVKTGLWVGDCFIYTSSVNRLNYYVG-GEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADK-VLPTIPKEQ.RTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCPFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTY-.LPSQVSRVVKLWRENLS
COPP_DROME/320-780 HSEMQQVNLKTIADG-.TEIKDGERLPVATKDMGACEIYPQTIAHNPNGRFVVVCG---DGEYIIYTSMALRNKAFGSAQEFVWALESNEYAIRENNGTVRLF-RNFKERK.-SFTPEYGAESIYGGYYFGVKTSSGLAFYDWETLQLVRRIEVQPKNVFWNESGSLVCLATDD.-----SYFVLGVDTAQVANAVETKEGLEDDGVESAFNVLGEVSECVKTGLWVGDCFIYTNSVNRINYYVG-GEIVTVSHLDRTMYLLGYVPKDNRIYLGDKELNVISFCLQLSVLEYQTAVMRRDFERADV-VLPTIPKEH.RTRVAHFLEKQGFKSQALQVSTDADHKFDLALQIGDLEIALKLARESENSQKWSQLADVASSKNNMSLVKECMQKANDLSGLLLLSTASGDAQLLEVVGAAGSAQGHHNLAFLSAFLRSDVERCLEILIETNRLPEAAFFARTY-.LPSQMSRIVELWREKLG
COPP_YEAST/325-794 ASDIFTAVIRGNEE--.--VEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG---DGEYVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYY-KNFKEVTsWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNGELVMIVNTNsNGDEASGYTLLFNKDAYLEAANNGNIDDSEGVDEAFDVLYELSESITSGKWVGDVFIFTTATNRLNYFVG-GKTYNLAHYTKEMYLLGYLARDNKVYLADREVHVYGYEISLEVLEFQTLTLRGEIEEAIENVLPNVEGKDsLTKIARFLEGQEYYEEALNISPDQDQKFELALKVGQLTLARDLLTDESAEMKWRALGDASLQRFNFKLAVEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAERAGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGlGDDAVNDIVTKWKENLI
Q9N4H7_CAEEL/340-786 GQQIRKLDLTTNKDV-.------ALCKLRYPQPF--MQPYYSLSFNPAEGTFLLTSRTHNKDLCAFELYKVASNSDGTTE-----AACVKSTGINALWVARNRFAVLDKA-.QNVSLRDLTNKELRKLENINTAVDDIFYAGTGMLLLRNDDGLQLFDVQQKIVTASVKVSKVR.-------YVIWSKSMEFAALLSKHTLTLVNRKLEILCTQQE-STRVKSGAWDDDSVFLYTTSNHIKYAINSGDCGIVRTLDLPLYILAIRG--NVLYCLNRDATPVEVPIDNSDYKFKLALINKRIDEVVN-MVRSANLVG.-QSIIGYLEKKGYPEIALHFVKDEKTRFGLAIECGNLEIALEAAKKLDEPAVWEALGETALLQGNHQIVEMSYQRTKNFEKLSFLYFVTGNTDKLVKMMKIAQARNDAHGHFQTALYTGDVEERVKVLRNCGQTSLAYLAAATHG.YSAEAEELKAELES-RQ
O77285_DROME/341-781 ERFLRKLDFTTTKDT-.------VVMQLRPG-----KSPVYSMSYNPALNAVLICTRTNNLENSTYDLCQIPKDTESQSE-----SDSKRSSGITAIWVARNRFAVLDRN-.QQLVIKNFKNEVTKKLPT---FCEEIFYAGTGMLLIRDPEFVTLYEVQRLVSVGSIKLAKCR.-------YVVWSPDMSLVALLCKHSVTICDRRLQYLCTVQE-NCRVKSGAWDESGVFIYTTSNHIKYAITNGDHGIIRTLDLPIYLTRVKG--NQVFCLDRECRTRVLHIDPTEYKFKLALIQRKYDEVLH-MVRNARLVG.-QSIIAYLQQKGYPEVALHFVKDEKTRFGLALECGNIEIALEAAKALDDKDCWDRLGQSALLQGNHQVVEMCYQRTKNFDKLSFLYLITGNLEKLKKMNKIAEIRKDVSAQYQGALLLGDVKERVNILKNCGQLSLAYLTAATHG.FDELTESLGESITS-QG
COPA_BOVIN/338-782 DRFLRQLDFNSSKDV-.------AVMQLRSGS----KFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADTQNPDA---PEGKRSSGLTAVWVARNRFAVLDRM-.HSLLIKNLKNEITKKVQVP--NCDEIFYAGTGNLLLRDAESITLFDVQQKRTLASVKISKVK.-------YVIWSADMSHVALLAKHAIVICNRKLEALCNIHE-NIRVKSGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKG--NNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVLH-MVRNAKLVG.-QSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHG.LDEEAESLKETFDP-EK
Q9AUR7_ORYSA/337-784 DRFLRFFEFTTQKEV-.------QLAPIRRPGSVSLNQSPKTLSYSPTENAVLICS---DVDGGSYELYIVPKDSAGRADYL---QDAKKGAGGSAVFVARNRFAVLEKSS.NQVLVRNLKNEIVKKSPLP-IATDAIYYAGTGSLLCKAEDRVTIFDLQQRLILGELQAPSVK.-------YVVWSSDMESVALLSKHAVVIANKKLVHRCTLHE-TIRVKSGAWDENGVFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITRVIG--NNIFCLDRDGKNKLVTVDASEYIFKLALLRKRYDHVMS-MIKNSQLCG.-QAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNIQIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLAFLYLITGYMDKVGFMCKIAGQNNNLMGQFHNALYLGDAMKRVEILENAGQLPLAYITATTHG.LTEIADRLAAELGE-NI
O80706_ARATH/337-784 DRFLRYYEYSTQRDS-.------QVIPIRRPGTPSLNQSPRTLSYSPTENAVLICS---DLDGGSYELYIIPKDSVGRSDVV---QDAKRGTGGSAVFIARNRFAVLEKST.SQVLVKNLKNEVVKKSPLP-IPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVR.-------YVVWSSDMESVALLSKHTIIIASKKLVLQCTLHE-TIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSG--NTIFCLDRDGKNKAITINATEYIFKLSLLRKRYDHVMS-MIKNSQLCG.-QAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNISVAVASATQINEKDHWYRLGVEALRQGNSGIVEFAYQQTKNFERLSFLYLITGNLDKLSKLMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHG.LNDIAERLATELGD-NV
Q9C1F2_PICAN/347-794 ESQVQQYQFDKQQVSL.------PMLSLNKISKS--WTKIRNISYNPAERSLLVQAG--ENENGVYSYMDLPKEIVGALEP----SPRGEGAVPAACFIARNRFVTFSKVT.HKLEVRDLRNTVTKVIDLD-SAVKDILYAGPGTILLMKPNEVIHYDVQQKKELAKIQISNAK.-------YAVWSADTQYVALLSKHTIIIANKKLETLMSMHE-TIRVKSAAWDDSGVLIYSTLNHIKYALLNGDNGTIKTLENTLYVIKVSG--RQCFCLNRKGEVEVVTIDPTEYRFKKALVNKNFNEVLR-IIKTSNLVG.-QNIIGYLQAKGYPEIALQFVEDSETRFELAIECDNLDIALEEAKKLDNPVIWEKLGKEALLQGNVPIVELVYQQLKKLEKLSFLYLITGETEKLSKMEQIAEARGDYSSLFQNSLYLNSVEKRINTFIETGLLPLAYATAKTNG.LDDVAESILSEAGLMEA
COPA_YEAST/343-787 EKQIQSFNFQKRVASL.------PYASLKGIGQP--WDAFRSISYNPSQHSVLVN-----EANGKFALVILPKQPVGAVEP----TSVTQDTGNFATFVGRNRFVVYNKNT.ESVEVRSLENKVTRNIKVE-ETVRTIVAAGPGSVLVIHPREVILYDVQQGKKVSQLAVKNVK.-------YVSWSLDGQYVALMSKHTITLATKKLELINSMHE-TIRIKSAAWDETGVLIYSTLNHIRYSLLNGDRGIIKTLEKTLYITKVQG--KLVYCLNREGEIEILTIDPTEYRFKKALVNKNFPEVLR-LIKDSNLVG.-QNIISYLQKSGYPEIALQFVQDPHIRFDLALEYGNLDVALDEAKKLNDSSTWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANG.DEAAASAFLEQAEVDEQ
O59946_EMENI/343-789 EKHVKSFDFAKNVESP.------SMLSLRKLGSP--WVPPRTLSYNPAERAVLVTS---PADGGVYELINLPRDATGAIEP----TDVKRGQASSAVFVARNRFAVFSQAN.QQVDIKDLSNSTTKSIKPP-AGTTDIYFGGTGSLLFITPTSVVLFDIQQKKQLAELAVSGVK.-------YVVWSNDGLYAALLSKHNVTIVTKTLEQVSSLHE-TIRIKSAAWDDAGVLLYSTLNHVKYSLLNGDNGIIRTLDQTVYLVKVKG--RSVYCLDRNAKPRTLEIDPTEYRFKLALVKRNYDEMLQ-IIKTSSLVG.-QSIISYLQKKGYPEIALQFVQDPQTRFELALECGNLDVAIEMARELDRPNLWNRLGIEALAHGNHQIVEMAYQKQRNFDKLSFLYLSIGDQEKLSRMAKIAEHRGDFTSRFQNAIYRGDVEDRIQMFKEVDLYPLAYLTAKAHG.LTEEAESILEVVGLSED