EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04042 alignment
(8 sequences with 1305 bp)


Q9DGB4_XENLA/255-524 TAT...GGTAACATGAATTTTTTTGGG---------------------GGACCTTCTTCT------------------ACATCAGTAAAAGCTTCAGTCAAACTACGGCAG---------TTGGAAGAGGAAAATGAAGATGCC---ATGCTTGTATTTTTA---TCTGATTTATGGTTAGATCAAGTTGAAGTTACAGAAAAACTTCACACAATGTTTTCAGGTTACTCCACAGCACCA------------CCAACCTGTTTTATATTCTGTGGAAACTTTTCT---------TCTGCACCTTACGGAAAA---------------------AATCATATCCAATCATTAAAAGAT---TCATTTAAAATACTGGCAGATATAATATGTGAATATCCAAATATACATAAAAGCAGTCGATTTGTTTTTGTACCTGGCCCTGAAGACCCAGGCCCTGGT------------...------TTCATT---------------TTACCAAGACCTCCAATTGCTGATCATATCACTGAAGAATTCCGCCAACGAGTACCA---------------------------------------------------------------------------TTCTCCATTTTTACTACAAATCCCTGCAGGATCCAGTACTGT------ACACAGGAAATTGTTGTTTTCCGTGAAGATTTGGTAAATAAAATGTGCAGAAATTGTGTTCGT---------------------------------------------------------------------------------------------TTTCCC------AACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTTGGAT...ATTCCTAGCCATTTTGTCAAAACCATCTTATCCCAAGGACATTTGACTCCTCTCCCTCCATTTGTTAGCCCTGTATACTGGGCATATGATTATGCTCTGAGGTTGTATCCGCTACCAGACTTGGTTGTCATCGCTGATAAATATGATCCATTCACCATCACCAACACA---...GAATGTCTGACCATCAACCCTGGATCATTTCCAAGA...AGTGGGTTTTCCTTCAAGGTCTACTATCCCTCCAGCAAAACAGCTGAAGACAGCAAACTT
Q8JHG8_BRARE/255-524 TTC...GGCAATGTGAACTTCTTCGGC---------------------GGGCCGTCCAGC------------------ACAGCGGTGAAAGCGTCCGCTAAACTGAAGCAG---------CTGGAGGAGGAGAACGAGGACGCC---ATGTTTGTGCTGGTG---TCAGACGTGTGGCTGGACAGTGTGGAGGTGCTGGAGAAGATACACACCATGTTCTCTGGATACTCCGCTCTGCCG------------CCCACCTGCTTCATCTTCTGTGGGAGTTTCTCC---------TCGGCTCCGTATGGCAGG---------------------ACTCAGCTGCGCTCGCTCAGAGAC---TCCTTTAAAGCGCTCGCTGACCTCATCTGTGAGTTTCCCAGCATTCACAGCAGCAGTCGGTTTGTGTTTGTTCCTGGTCCAGAAGACCCTGGACCCGGC------------...------GCGGTT---------------TTACCCAGGCCTCCACTGGCGGAGCACATCACAGAGGAGTTTCAGCAGCGTGTGCCG---------------------------------------------------------------------------CTCTCTGTCTTCACCACCAACCCCTGCAGGATCCAGTACTGC------AGTCAGGAGCTGGTGATTATTCGGGAGGATCTGGTCAATAAGATGTGCCGGAACTGTGAGCGT---------------------------------------------------------------------------------------------CTGCCG------AGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCTGGAC...ATCCCTACACACTTTGTGAAGACCGTGCTGTCTCAGGGTCACCTGACGCCGCTGCCGCTGTACGTGTGTCCGGTGTTCTGGGCGTACGATCACACACTCCGCCTGTATCCTGTACCAGACGTCATCGTGTTTGCAGACAAATACGACCCGTTCAACATCTGCAACACC---...GACTGCCTGTGCATCAACCCGGGCTCCTTCCCGAGA...AGCGGATTCTCCTTCAAGGTGTATTACCCGTCCAGCAGGACTGTGGAGGACAGTAAGCTC
Q95RJ7_DROME/132-398 TTC...GGCACCGCCAACACTTGGGGC---------------------GGTGAATCTGCT------------------AAGCTGCTGAAGTACTCAGCCGGACTACAGGAA---------CTGGAGCGTACCAACACGGAAACA---ACCATTGTTTTCCTT---TCCGACGTTCGGTTGGATCTGCCGGTTGTCATGGAGAAGCTGCGCCAGTTGTTCGTGGGCTATGATTCCTGTCCG------------CCGCAGGCTATAGTGCTCATGGGTCCCTTCACG---------GCCAGCACAAGGAATCAT---------------------CATGAACTGAGGCATCACCTGGAT---GCATTGGGTGGCTTGGCA---GCTGGCTGCGAGCAG------CTGAAGAAGCAAACGGATCTGATACTCGTTCCCTCGTCCGAAGATCCCACGGCACCT------------...------AATATT---------------CTGCCCCGTGCTCCAATTCCCGAATGCCTGGCAGCCGGGCTGCTAAAGGCCTGGCCA---------------------------------------------------------------------------CGCACCCAGTTGGCTACGAATCCGTGTCGCCTGCAGTACTGC------ACCCAGCAGATTGTGGTCTGCCGTCTGGATTTGATGGCCAAGTTTTGTCGCAACACCTTGCAT---------------------------------------------------------------------------------------------TTTCCT------GAAGAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTCCCAG...ATCGAGCAGCATTTTGCCAGAACGATTGTGTGCCAGGGTCATTTGGTGCCCATTCATCCGATTGCCATGCCAGTGCACTGGGACTACGATCCTGCTCTGTGGTTGTATCCACTGCCGGATCTGATTGTCATGGGCGATTCGTGTCAGAGCTTTAGCAGCAGTCAACAT---...GGCTGCACTGTTCTCAATACCGGCTCCTTTGTCAAG...TCCAAGTTCGCATTCAAAGTGTATATACCAGCGACGCGAACGATTGAGGACTCGGAGATA
Q7Q7P2_ANOGA/252-517 TTT...GGAACCGTGAACAGTTGGGGT---------------------GGTCCCTCAAAA------------------ACGCTTCTGAAATACTCTCGCAATCTAAACGAT---------TTGGAGAAAGCCAATGTGGAGCAC---AGTCTTGTGTTTCTG---TCCGATTGTTGGCTGGACAATCCGATCGTGATGGAAAAGTTGGAACAATTGCTGAGAGGATACGATGATTTCCCC------------CCGGTAGCGATAGTACTTATGGGACCGTTC------------GCAAGAAGCATCGAGAAT---------------------------GTCTACACACTAAAAGGT---CACTTTGTAAAGCTCGGTGAAATATTGTCCAGTTGTGAGAAGCTAAAATCGCAAACCGATTTAGTTATTGTGCCTTCCATTGATGATCCCGCAGCTGCA------------...------AATATC---------------TTACCTCGACCTCCTGTACCAGAAGCTTTAGCAGGAGAGCTGAAAAAACGATTCCCT---------------------------------------------------------------------------AGAACTATTTTGACCACAAATCCGTGCCGGTTGCAATACTGT------ACTCAGCAAATTGTTGTGTGTCGTGCCGATTTGGTAACCAAATTGTGTCGGAATACGATACAT---------------------------------------------------------------------------------------------TTTCCC------AAAGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGACTA...TTGGAAGAGCATTTTGCCCGGACAATTATTAATCAGAATACGTTAGCGCCTTTAACACCGATTGCGTTTCCTACACACTGGAATTATGATGCTGCCCTCTCTCTCTATCCGTTACCTGATTTAATCGTTATAGGGGATCCATGTCAAGGCTTTCATACAACTGAACAG---...GAGTGCACTGTTATGAATGTGGGATCCTTTCCGAAA...TCAAAATATGCATTTAAGGTGTATTATCCCTCTAGCAGAACAGTTGAAGATTCGCAAATA
Q9C577_ARATH/214-487 CAT...TCTGAATATGATTTCTTCGGA---------------------GGC---GGCACA------------------CTAACTAAAGAAGAGATGATTAAACTTGCAGAC---------CTTGAAAGACAAGCGGTGAATGAC---ACATTTGTCATATTG---TCTGACATATGGTTGGACGACGAAGAGGTTATGAGGAAGCTGGAAACTGTTCTTGACGGTTTTGAAAGTGTGGAG------ACAGTACCCTCCTTGTTTGTTTTTATGGGAAATTTTTGT---------TCTCGCCCATGCAACTTATCCTTT---------------GGTTCGTATTCAAGCCTTAGGGAG---CAGTTTGGTAAACTTGGGAGAATGATTGGAAACCATCCACGGCTTAAAGAAAATAGTCGGTTTTTATTCATTCCAGGTCCTGAGGACGCAGGTCCCTCA------------...------ACAGTC---------------TTGCCAAGATGCGCTTTACCGAAATATTTAACCGAAGAGCTTCGAAACATTATTCCC---------------------------------------------------------------------------AATGCAATATTTTCAAGCAATCCTTGCAGAGTAAAGTTCTAT------AACCAAGAGATTGTGTTCTTCCGACAAGATCTTCTGTATCGGATGCGTCGTTCATGCTTAGTA---------------------------------------------------------------------------------------------ACCCCT------TCCTCAGAAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAATGAC...CCTTTTAAGCATCTTGTCTACACAATAACTCATCAGAGCCATCTATGTCCTCTACCTCTCATGGTGCAACCCATCATTTGGAACTACGATCACGCTCTTCGACTGTACCCAACTCCTCATACGATAGTATTAGGTGACAAGAGTGAGCAAGAGGTTTGCAAATTTGGG---...GGAACAACATGTTTCAATCCAGGCTCTTTCTCA---...ACTGATAGCACATTCGTAGCTTATCGACCTTCCACTCAAGAAGTCGAACTCTCTGCTTTG
Q872F0_NEUCR/447-830 TTC...GGCTGGATCGACTTCCTGGGCGTAGGTAGCGAGAGGGCAGTCGGG---TCCAAA------------------ATGCGCAAGTTGGAGCACAGAATTCTTCGGCAACCAGCGCTGTTGGAGGATGGCAGGCCGTCGAGGGGTAGGGCAGTGATTATT---GGCGAACTAAACCTAGATCAGCCGAGGAGTTTGCAGGCACTGAGAAAAATCTTGGGTCTCTATGCTAGTGATCCTGAAGGGTGTACACCCATGACGTTTGTGCTGGCGGGTAACTTCACGCAGCATGCTGTCATGGCGAGGGGCGGGAGT------------------GGGGGGAGTATTGAGTACAAGGAG---TTTTTCGATGCGTTGGCATCGACACTGGCGGATTTCCCTAGTCTGCTCACGACGGCTACCTTTGTTTTTGTGCCAGGTGACAACGACGGGTGGGTGTCTGCCTTCTCAGGTggtGCGGCAACTCCT---------------TTGCCGAGGAAACCCGTCCCAGATCTGTTTACTTCCCGCATCAGGAGGGTATTCGCAGCAGCGAATGCTGAAGCCGGGCTAGCCAACCCTGGCAAAGAAACAGAAAAGGATGCAGGCAAGAGGAGAGGCGGCGAAGCTGTCTGGACAACCAACCCAAGTAGGATAACCCTTTTCGGGCCTAGTCACGAAATGGTTCTTTTCCGAGATGACATCTCCGCCCGGTTACGACGAGCTTCTGTCCGTCTTAAGAACACGAGCAAAGCCTCCGTCGAGCCGGAACCCCCAACCAATGGTAACGACGACTCGGCAATGGATAACCAATGTCCACCCTCCTCCCTCCCC------GACGCCCCCGATGCTGACGACGAAGACATGGCCGACACAACCATGACCGACGCCATGGATGTCGATTCT---------------------GCCCCTGCCCCTAAC---------------------------CAAAAGACTACCATGCCTCCTCCATCTTCCATACCCTACGACGTCCTC...GCCGCCCGCAAGCTAGTGAAAACCATTCTCGACCAAGGCTATCTCGCTCCTTTCCGGCAAGCTATCCGCCCGGTACATTGGGACTATACTTCCGCCATGTACCTCTACCCGCTGCCGACGGCCATGGTACTGGTGGATACTACCGCTCCGCCGTTTTGCGTGACGTATGAG...GGGTGCCACGTGATGAATCCGGGGAGCATATTA---...------------------------GTGCCGGGGAGGAAGGGGGCGGCACGGTGGGTTGAG
DPB2_YEAST/362-690 ATA...GGTAATCTCGATCTCTTAGGAATA---------------CATGGCATTTCTAATAACAATTTCATTGCTCGTTTGGATAAAGATTTGAAGATTAGATTACACCTT---------TTGGAGAAAGAATTAACAGATCAT---AAATTTGTAATTCTCGGCGCAAATTTGTTCCTAGATGATTTGAAAATTATGACTGCACTCAGCAAAATTTTGCAAAAATTAAATGATGACCCA------------CCGACCCTATTAATTTGGCAAGGTTCTTTCACT---------TCAGTTCCCGTTTTCGCATCAATGAGTAGCCGGAATATAAGTAGTTCCACTCAATTTAAGAAT---AATTTCGATGCCTTGGCGACGCTTCTGTCAAGATTTGACAATTTGACCGAAAATACCACAATGATATTTATTCCAGGTCCTAACGATTTATGGGGGTCG------------...ATGGTGTCATTGGGGGCAAGTGGGACATTACCGCAAGATCCAATTCCTAGTGCGTTTACCAAAAAAATCAACAAGGTCTGTAAA---------------------------------------------------------------------------AACGTTGTATGGAGCTCAAATCCAACTAGAATAGCATACTTA------TCCCAAGAAATAGTCATTTTCAGGGACGATTTATCCGGAAGATTCAAAAGACACCGTTTGGAA---------------------------------------------------------------------------------------------TTCCCATTCAACGAGAGCGAAGATGTT---------------------------------TATACTGAAAACGATAACATGATGTCTAAAGACACCGATATTGTACCAATCGATGAATTAGTTAAAGAACCAGACCAGTTACCACAA------------------------------------AAGGTTCAA...GAAACAAGAAAACTCGTTAAAACAATACTAGACCAGGGTCATTTATCGCCATTTCTTGATTCCTTGCGCCCAATTTCATGGGATTTGGACCACACTTTGACACTTTGCCCAATACCATCGACAATGGTTCTTTGCGACACTACTTCTGCACAATTTGATTTGACATACAAC...GGTTGTAAAGTAATTAACCCTGGAAGTTTCATTCATaatAGACGTGCTAGGTATATGGAGTACGTTCCATCCTCAAAGAAAACTATACAAGAAGAGATA
O94263_SCHPO/302-592 CTT...AATAATTTAGATATTTTGGGG---------------------TTG------AAT------------------ATGGATGCAAAGCAACTTGCTCTTCTCCGTCAC---------GCGGAACAGGCATATCAGTCACAA---GCTTTTGTTTGTATC---AGCGAGGTTCATCTTGACAACCATCAAACTTTCTATGCATTAGAAAAAATATTCCAAAAATATGAATCCTCTGAA------GCTGTGCCGTTTTGTATAATATTATGTGGAAGTTTTATG---------TCTTCCGCTTTCCATAATTCA------------------GGAAGCTCAATTCAATATAAAGAA---GGATTTAATAAGCTTGCAGCTTCTCTTGAGAAGTTTCCAAAAATTTGCGAAAAGACAAAATTCATATTTGTCCCCGGTCCAAACGACCCTTGGACGACA---------AAT...GGGATATCCTTA---------------ATGCCTAAGCATTCAATACCCCTTCATTTCGTAAATCGGATCCAACGCGTTTGTAAG---------------------------------------------------------------------------CATACCATTTTCGCTTCAAACCCTTGCCGCATCATTTTCTTT------TCTCAGGAAGTACTAATTTATAGAGACGATATATCAGGAAGATTTCAAAGGAATTCATTAAAG---------------------------------------------------------------------------------------------TTTGGG------AAGACTCCCCAAGGT------------------------------------ACCTCCAATATTAATTCT---------------------ATACCCCTTGCAGAA---------------------------CAA------------------------------------CAAGTGCAT...CAGCAAAGAAAATTGGTTAAAACAGTTTTAGATCAGTCTCACCTTTCACCGTTTCCATCGAGAACACGACCAATATTGTGGGATTTTGATTATGCTTTATCAGTTTTCCCGCTTCCTAGCTGTATGGGTCTAATAGATTCTGAGTCGTCGGCGTTTGATGTTCATTATGGA...GGTTGCCCAACTTTTAATCCCGGTGCTCTTTTACTTggcGTTCACTATAATTGGCAAGAAGTATTTCCAGTAAAAAAAGAAATAATTACACACAAGGAG