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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04014 phylogeny
for restricted amino acid alignment


 
(((((((((Q97RD4_STRPN/6-57,((((((CHPR_ECOLI/7-60,Q9JZS7_NEIMB/5-57),PEMI_ECOLI/7-61),(Q9K6K9_BACHD/8-60,Q9RX99_DEIRA/6-58)),(Q9AC34_CAUCR/9-58,((((Q9Z384_ACTAC/7-58,Y321_HAEIN/5-56),P72576_SYNY3/15-64),Y948_HAEIN/6-56),VAPB_BACNO/7-54))),(((((O28916_ARCFU/9-64,(O57970_PYRHO/7-63,Q9V263_PYRAB/7-63)),(Q9YEV8_AERPE/169-224,(Q97ZI3_SULSO/16-72,Q980F5_SULSO/7-63))),((Q9HS09_HALN1/7-62,Q9UX12_SULSO/10-64),(Q97CB8_THEVO/9-64,Q9HLW4_THEAC/9-64))),(O29464_ARCFU/7-61,O29778_ARCFU/7-61)),Q97VK4_SULSO/10-65)),Q9EYZ9_PHOPR/7-61)),((O07779_MYCTU/2-57,Y2626_MYCBO/2-57),(O28094_ARCFU/6-55,Q97UV7_SULSO/7-58))),((O85908_SPHAR/4-59,Q98F73_RHILO/2-55),Q9HHH9_HALN1/10-65)),(O58917_PYRHO/66-124,Q97U92_SULSO/6-60)),((Q97XQ3_SULSO/4-58,Q9V2F7_PYRAB/4-58),(O73992_PYRHO/4-58,((Q9V0L9_PYRAB/4-58,Q97UE2_SULSO/4-58),O30311_ARCFU/3-59)))),Q97EA0_CLOAB/7-63),Q97D32_CLOAB/7-64),Q97HR7_CLOAB/7-62),Q97D34_CLOAB/7-62,((ABH_BACSU/7-62,Q9K5V5_BACHD/7-62),ABRB_BACSU/9-64));
(((((((((Q97RD4_STRPN/6-57:1.52565,((((((CHPR_ECOLI/7-60:0.34336,Q9JZS7_NEIMB/5-57:1.14962):0.32907,PEMI_ECOLI/7-61:0.83508):0.13935,(Q9K6K9_BACHD/8-60:0.64043,Q9RX99_DEIRA/6-58:0.19239):0.23454):0.25255,(Q9AC34_CAUCR/9-58:0.67637,((((Q9Z384_ACTAC/7-58:0.76710,Y321_HAEIN/5-56:0.33607):0.03184,P72576_SYNY3/15-64:1.66287):0.28940,Y948_HAEIN/6-56:1.18039):0.49416,VAPB_BACNO/7-54:0.76481):0.58286):0.68494):0.17778,(((((O28916_ARCFU/9-64:1.00960,(O57970_PYRHO/7-63:0.15222,Q9V263_PYRAB/7-63:0.18536):0.20076):0.18781,(Q9YEV8_AERPE/169-224:0.39607,(Q97ZI3_SULSO/16-72:0.70549,Q980F5_SULSO/7-63:0.44866):0.18058):0.21947):0.23382,((Q9HS09_HALN1/7-62:0.72843,Q9UX12_SULSO/10-64:0.64134):0.28964,(Q97CB8_THEVO/9-64:0.44486,Q9HLW4_THEAC/9-64:0.10973):0.50815):0.30151):0.14108,(O29464_ARCFU/7-61:0.66949,O29778_ARCFU/7-61:0.50134):0.21709):0.16200,Q97VK4_SULSO/10-65:0.94558):0.55748):0.12230,Q9EYZ9_PHOPR/7-61:0.90544):0.14281):0.49896,((O07779_MYCTU/2-57:0.93145,Y2626_MYCBO/2-57:0.41095):0.47633,(O28094_ARCFU/6-55:0.37809,Q97UV7_SULSO/7-58:0.35878):0.87025):0.28697):0.00680,((O85908_SPHAR/4-59:1.14622,Q98F73_RHILO/2-55:0.53111):0.40732,Q9HHH9_HALN1/10-65:0.65363):0.53265):0.29344,(O58917_PYRHO/66-124:0.86207,Q97U92_SULSO/6-60:0.69156):0.15571):0.00000,((Q97XQ3_SULSO/4-58:0.50163,Q9V2F7_PYRAB/4-58:0.25772):0.17307,(O73992_PYRHO/4-58:0.23577,((Q9V0L9_PYRAB/4-58:0.25632,Q97UE2_SULSO/4-58:0.37937):0.04078,O30311_ARCFU/3-59:0.34804):0.08417):0.09387):0.48464):0.81224,Q97EA0_CLOAB/7-63:0.44020):0.19127,Q97D32_CLOAB/7-64:0.28911):0.28097,Q97HR7_CLOAB/7-62:0.10436):0.08741,Q97D34_CLOAB/7-62:0.06825,((ABH_BACSU/7-62:0.19680,Q9K5V5_BACHD/7-62:0.34081):0.15131,ABRB_BACSU/9-64:0.09975):0.34115);