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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04014 phylogeny
for nucleotide alignment


 
((((((((((((O85908_SPHAR/4-59,Q9JZS7_NEIMB/5-57),((O07779_MYCTU/2-57,Y2626_MYCBO/2-57),Q98F73_RHILO/2-55)),Q9HHH9_HALN1/10-65),Y948_HAEIN/6-56),((((VAPB_BACNO/7-54,Q97RD4_STRPN/6-57),((Q9Z384_ACTAC/7-58,Y321_HAEIN/5-56),P72576_SYNY3/15-64)),((((Q9EYZ9_PHOPR/7-61,CHPR_ECOLI/7-60),PEMI_ECOLI/7-61),(Q9K6K9_BACHD/8-60,Q9RX99_DEIRA/6-58)),((Q9UX12_SULSO/10-64,((((O57970_PYRHO/7-63,Q9V263_PYRAB/7-63),((Q9YEV8_AERPE/169-224,(Q97ZI3_SULSO/16-72,(O28916_ARCFU/9-64,Q97VK4_SULSO/10-65))),Q980F5_SULSO/7-63)),(Q97CB8_THEVO/9-64,Q9HLW4_THEAC/9-64)),(O29464_ARCFU/7-61,O29778_ARCFU/7-61))),Q9HS09_HALN1/7-62))),Q9AC34_CAUCR/9-58)),(O28094_ARCFU/6-55,Q97UV7_SULSO/7-58)),(Q97XQ3_SULSO/4-58,(Q9V2F7_PYRAB/4-58,((O30311_ARCFU/3-59,Q97UE2_SULSO/4-58),(O73992_PYRHO/4-58,Q9V0L9_PYRAB/4-58))))),O58917_PYRHO/66-124),Q97U92_SULSO/6-60),((ABH_BACSU/7-62,Q9K5V5_BACHD/7-62),ABRB_BACSU/9-64)),Q97D34_CLOAB/7-62),(Q97D32_CLOAB/7-64,Q97EA0_CLOAB/7-63),Q97HR7_CLOAB/7-62);
((((((((((((O85908_SPHAR/4-59:0.03488,Q9JZS7_NEIMB/5-57:1.03014):0.41253,((O07779_MYCTU/2-57:0.63930,Y2626_MYCBO/2-57:0.42076):0.25843,Q98F73_RHILO/2-55:0.44448):0.18788):0.05797,Q9HHH9_HALN1/10-65:0.44537):0.19509,Y948_HAEIN/6-56:1.51613):0.09494,((((VAPB_BACNO/7-54:0.22762,Q97RD4_STRPN/6-57:0.88507):0.40424,((Q9Z384_ACTAC/7-58:0.66107,Y321_HAEIN/5-56:0.05724):0.29552,P72576_SYNY3/15-64:0.78635):0.17796):0.22673,((((Q9EYZ9_PHOPR/7-61:0.76496,CHPR_ECOLI/7-60:0.29966):0.13932,PEMI_ECOLI/7-61:0.47985):0.15239,(Q9K6K9_BACHD/8-60:0.82290,Q9RX99_DEIRA/6-58:0.12788):0.30446):0.19464,((Q9UX12_SULSO/10-64:0.62137,((((O57970_PYRHO/7-63:0.22092,Q9V263_PYRAB/7-63:0.21155):0.25816,((Q9YEV8_AERPE/169-224:0.43414,(Q97ZI3_SULSO/16-72:0.44088,(O28916_ARCFU/9-64:0.40507,Q97VK4_SULSO/10-65:0.67239):0.23859):0.07944):0.12359,Q980F5_SULSO/7-63:0.46880):0.03761):0.09228,(Q97CB8_THEVO/9-64:0.21214,Q9HLW4_THEAC/9-64:0.36398):0.25828):0.05844,(O29464_ARCFU/7-61:0.44367,O29778_ARCFU/7-61:0.51765):0.17652):0.11097):0.11175,Q9HS09_HALN1/7-62:0.37141):0.22839):0.09194):0.08057,Q9AC34_CAUCR/9-58:0.63614):0.13209):0.51451,(O28094_ARCFU/6-55:0.09394,Q97UV7_SULSO/7-58:0.54476):0.02952):15.14317,(Q97XQ3_SULSO/4-58:0.39773,(Q9V2F7_PYRAB/4-58:0.35603,((O30311_ARCFU/3-59:0.27714,Q97UE2_SULSO/4-58:0.32336):0.05925,(O73992_PYRHO/4-58:0.27241,Q9V0L9_PYRAB/4-58:0.23641):0.12439):0.14531):0.09359):0.00000):0.24358,O58917_PYRHO/66-124:0.56078):0.10171,Q97U92_SULSO/6-60:0.26423):0.37389,((ABH_BACSU/7-62:0.23351,Q9K5V5_BACHD/7-62:0.26251):0.19693,ABRB_BACSU/9-64:0.11786):0.24272):0.09332,Q97D34_CLOAB/7-62:0.08380):0.06658,(Q97D32_CLOAB/7-64:0.31668,Q97EA0_CLOAB/7-63:0.29143):0.16347,Q97HR7_CLOAB/7-62:0.15037);