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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03992 phylogeny
for restricted amino acid alignment


 
((((((((Q8U5I6_AGRT5/11-74,(((((((CURD_STRCN/25-86,(WH42_STRCO/54-117,SCHA_STRHA/32-95)),(Q93HM4_STRAW/25-88,Q9L164_STRCO/53-116)),(O32459_9ACTO/14-77,(Q8KSV9_9ACTO/13-76,Q8KY33_STRCU/12-75))),((YQJZ_BACSU/21-82,Q9I1K5_PSEAE/256-317),((Q98DQ1_RHILO/10-73,Q8UFR0_AGRT5/10-73),(Q9S457_SALTY/10-73,Q8YJD4_BRUME/10-73)))),(((Q96XB3_SULTO/36-99,Q97V29_SULSO/10-74),(((YCZJ_BACSU/10-68,Q9RTW6_DEIRA/32-90),Q8UKD4_AGRT5/10-68),Q9RSI3_DEIRA/19-82)),(((O32458_9ACTO/18-81,(Q8KSW0_9ACTO/14-79,Q9FD14_STRCU/17-80)),Q9HNN4_HALN1/410-473),(((((O31534_BACSU/27-91,Q9K649_BACHD/10-74),((Q92EH3_LISMO/10-82,(Q8NX62_STAAW/11-75,Q99X56_STAAM/10-74)),Q9K7R6_BACHD/10-74)),Q9YCC3_AERPE/12-74),((YHGC_BACSU/74-136,Q8NUM1_STAAW/52-115),(Q9RXN8_DEIRA/10-73,Q9RX69_DEIRA/10-73))),((O54100_STRCO/38-102,(Q92N21_RHIME/10-77,(((Q9AE39_RHILE/10-77,Q8YC27_BRUME/10-77),Q98L66_RHILO/10-77),(Q93SH3_BRAJA/10-75,Q8UCM2_AGRT5/10-75)))),(O06156_MYCTU/11-74,(Q8NLF1_CORGL/11-74,Q8NMA1_CORGL/11-74))))))),(O68922_9ACTO/14-77,((O86482_STRAA/9-72,(Q54813_STRPE/21-91,(O54259_STRNO/21-84,Q9L552_9ACTO/21-84))),(Q9FC02_STRCO/23-88,Q8XYB2_RALSO/32-95)))),(Q983R7_RHILO/19-79,(((Q9X9W3_STRCO/138-196,Q9X9W3_STRCO/27-88),Q53908_STRCO/20-83),(TCMH_STRGA/19-82,Q9L4Y0_9ACTO/19-82))))),((YGIN_ECOLI/12-83,((Q99IW7_9ZZZZ/10-70,(Q98HP0_RHILO/10-70,Q9A6W1_CAUCR/122-182)),(Q9ZBJ4_STRCO/11-73,Q8Y824_LISMO/13-76))),((((((Q9I6L9_PSEAE/11-73,Q9I267_PSEAE/52-115),Q930L9_RHIME/12-75),((Q9XAT7_RHOER/17-80,(Y1783_SYNY3/58-121,Q92MY2_RHIME/10-73)),(Q92Y06_RHIME/13-76,Q9I1R9_PSEAE/13-76))),(O86332_MYCTU/13-75,(Q9RX23_DEIRA/12-76,Q8PEE0_XANCP/16-79))),(Q8KL47_RHIET/17-80,(((Q9HYL5_PSEAE/10-74,Q9HY51_PSEAE/13-76),(((((O06569_MYCTU/10-73,Q9RKA2_STRCO/10-73),Q8NRX6_CORGL/10-72),Q8NRX5_CORGL/10-72),(((Q97DS8_CLOAB/10-74,(Q8PWK2_METMA/11-74,Q8TTU6_METAC/9-72)),(Q9CHY3_LACLA/10-73,((YCNE_BACSU/10-73,(Q8YAL6_LISMO/10-73,(Q8Y476_LISMO/10-73,Q927R5_LISIN/10-73))),Q9JYI1_NEIMB/12-75))),Q8ZDH9_YERPE/10-73)),(Q9KLV5_VIBCH/10-73,Q8ZFU3_YERPE/11-74))),O33291_MYCTU/11-71))),((((Q98HA4_RHILO/10-73,Q9ABN2_CAUCR/11-74),Q8U7C1_AGRT5/20-82),(Q9HHS4_HALN1/10-73,(Q930A7_RHIME/79-143,Q8UIT6_AGRT5/15-79))),(Q9X5D6_ZYMMO/15-78,Q9RSM4_DEIRA/27-90))))),(Q9A6G2_CAUCR/10-74,Q8XW80_RALSO/20-84)),((Q97SM8_STRPN/20-85,Q9CFE4_LACLA/11-76),Q93LN2_CYTJO/10-73)),((Q9I5L9_PSEAE/11-75,Q8UB57_AGRT5/14-77),(Q92VV2_RHIME/10-73,(Q9CLF6_PASMU/10-73,(YNEC_ECOLI/10-73,Q8ZIT1_YERPE/10-73))))),Q8RDZ4_FUSNN/121-184),Q96AZ7_HUMAN/9-71),O75547_HUMAN/164-226,Q9ESB4_RAT/260-322);
((((((((Q8U5I6_AGRT5/11-74:1.08925,(((((((CURD_STRCN/25-86:0.18466,(WH42_STRCO/54-117:0.10872,SCHA_STRHA/32-95:0.13217):0.07485):0.02860,(Q93HM4_STRAW/25-88:0.05649,Q9L164_STRCO/53-116:0.19008):0.09082):0.72962,(O32459_9ACTO/14-77:0.81561,(Q8KSV9_9ACTO/13-76:0.25390,Q8KY33_STRCU/12-75:0.22434):0.29500):0.58387):0.05376,((YQJZ_BACSU/21-82:0.29255,Q9I1K5_PSEAE/256-317:0.31117):0.77510,((Q98DQ1_RHILO/10-73:0.17862,Q8UFR0_AGRT5/10-73:0.35440):0.14445,(Q9S457_SALTY/10-73:0.54107,Q8YJD4_BRUME/10-73:0.13370):0.17709):0.63387):0.32294):0.07731,(((Q96XB3_SULTO/36-99:0.13526,Q97V29_SULSO/10-74:0.43089):0.55131,(((YCZJ_BACSU/10-68:0.53106,Q9RTW6_DEIRA/32-90:0.25511):0.30970,Q8UKD4_AGRT5/10-68:0.93598):0.14689,Q9RSI3_DEIRA/19-82:1.01445):0.31580):0.10762,(((O32458_9ACTO/18-81:0.35430,(Q8KSW0_9ACTO/14-79:0.19553,Q9FD14_STRCU/17-80:0.16408):0.11358):0.93451,Q9HNN4_HALN1/410-473:1.01086):0.06518,(((((O31534_BACSU/27-91:0.33582,Q9K649_BACHD/10-74:0.13460):0.54379,((Q92EH3_LISMO/10-82:0.62966,(Q8NX62_STAAW/11-75:0.27164,Q99X56_STAAM/10-74:0.18760):0.43804):0.02891,Q9K7R6_BACHD/10-74:0.47112):0.13504):0.01182,Q9YCC3_AERPE/12-74:0.67333):0.30570,((YHGC_BACSU/74-136:0.42742,Q8NUM1_STAAW/52-115:0.88590):0.31994,(Q9RXN8_DEIRA/10-73:0.52738,Q9RX69_DEIRA/10-73:0.30424):0.21295):0.09604):0.11696,((O54100_STRCO/38-102:0.77878,(Q92N21_RHIME/10-77:0.10427,(((Q9AE39_RHILE/10-77:0.24883,Q8YC27_BRUME/10-77:0.26128):0.06016,Q98L66_RHILO/10-77:0.17294):0.07397,(Q93SH3_BRAJA/10-75:0.44723,Q8UCM2_AGRT5/10-75:0.30063):0.19020):0.24545):0.54131):0.26133,(O06156_MYCTU/11-74:0.17643,(Q8NLF1_CORGL/11-74:0.17035,Q8NMA1_CORGL/11-74:0.49067):0.28906):0.31063):0.19765):0.35654):0.11294):0.09778):0.29691,(O68922_9ACTO/14-77:0.75907,((O86482_STRAA/9-72:0.70369,(Q54813_STRPE/21-91:0.40322,(O54259_STRNO/21-84:0.39161,Q9L552_9ACTO/21-84:0.31595):0.14557):0.19429):0.17965,(Q9FC02_STRCO/23-88:0.98000,Q8XYB2_RALSO/32-95:0.50875):0.23437):0.08132):0.20132):0.16570,(Q983R7_RHILO/19-79:0.53706,(((Q9X9W3_STRCO/138-196:0.28703,Q9X9W3_STRCO/27-88:1.22432):0.32267,Q53908_STRCO/20-83:0.50939):0.18908,(TCMH_STRGA/19-82:0.19699,Q9L4Y0_9ACTO/19-82:0.36693):0.26960):0.21935):0.40341):0.13168):0.27931,((YGIN_ECOLI/12-83:0.89324,((Q99IW7_9ZZZZ/10-70:0.21226,(Q98HP0_RHILO/10-70:0.34102,Q9A6W1_CAUCR/122-182:0.22376):0.09330):0.14644,(Q9ZBJ4_STRCO/11-73:0.62787,Q8Y824_LISMO/13-76:0.55417):0.33356):0.65657):0.16222,((((((Q9I6L9_PSEAE/11-73:0.46470,Q9I267_PSEAE/52-115:0.40246):0.66054,Q930L9_RHIME/12-75:0.50124):0.39554,((Q9XAT7_RHOER/17-80:0.96422,(Y1783_SYNY3/58-121:0.50944,Q92MY2_RHIME/10-73:0.56247):0.18905):0.05682,(Q92Y06_RHIME/13-76:0.99396,Q9I1R9_PSEAE/13-76:0.42219):0.36441):0.04468):0.12388,(O86332_MYCTU/13-75:0.63814,(Q9RX23_DEIRA/12-76:0.56787,Q8PEE0_XANCP/16-79:0.85739):0.10199):0.34439):0.02330,(Q8KL47_RHIET/17-80:0.74699,(((Q9HYL5_PSEAE/10-74:0.87315,Q9HY51_PSEAE/13-76:0.21241):0.34909,(((((O06569_MYCTU/10-73:0.33475,Q9RKA2_STRCO/10-73:0.19346):0.36797,Q8NRX6_CORGL/10-72:0.12938):0.18457,Q8NRX5_CORGL/10-72:0.44666):0.50297,(((Q97DS8_CLOAB/10-74:0.48329,(Q8PWK2_METMA/11-74:0.12277,Q8TTU6_METAC/9-72:0.17441):0.29552):0.29971,(Q9CHY3_LACLA/10-73:0.72107,((YCNE_BACSU/10-73:0.33217,(Q8YAL6_LISMO/10-73:0.24945,(Q8Y476_LISMO/10-73:0.20689,Q927R5_LISIN/10-73:0.09610):0.25656):0.28199):0.12854,Q9JYI1_NEIMB/12-75:0.44084):0.08770):0.14261):0.03322,Q8ZDH9_YERPE/10-73:0.73634):0.07806):0.11379,(Q9KLV5_VIBCH/10-73:0.67041,Q8ZFU3_YERPE/11-74:0.43530):0.23600):0.02876):0.08209,O33291_MYCTU/11-71:1.07225):0.04168):0.06022):0.05291,((((Q98HA4_RHILO/10-73:0.61405,Q9ABN2_CAUCR/11-74:0.26153):0.30749,Q8U7C1_AGRT5/20-82:0.90453):0.20153,(Q9HHS4_HALN1/10-73:0.58199,(Q930A7_RHIME/79-143:0.40234,Q8UIT6_AGRT5/15-79:0.20648):0.63698):0.11276):0.19832,(Q9X5D6_ZYMMO/15-78:0.74130,Q9RSM4_DEIRA/27-90:0.83670):0.44817):0.08323):0.08567):0.11142):0.09756,(Q9A6G2_CAUCR/10-74:0.59764,Q8XW80_RALSO/20-84:0.52208):0.50522):0.05787,((Q97SM8_STRPN/20-85:0.46084,Q9CFE4_LACLA/11-76:0.14790):1.25537,Q93LN2_CYTJO/10-73:1.20624):0.16036):0.14791,((Q9I5L9_PSEAE/11-75:0.76153,Q8UB57_AGRT5/14-77:0.50715):0.21792,(Q92VV2_RHIME/10-73:0.34225,(Q9CLF6_PASMU/10-73:0.23174,(YNEC_ECOLI/10-73:0.13272,Q8ZIT1_YERPE/10-73:0.20675):0.30978):0.15193):0.20939):0.16876):0.15905,Q8RDZ4_FUSNN/121-184:1.05818):0.39151,Q96AZ7_HUMAN/9-71:0.54256):0.60723,O75547_HUMAN/164-226:0.08307,Q9ESB4_RAT/260-322:0.20076);