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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03992 phylogeny
for amino acid alignment


 
((((((Q8U5I6_AGRT5/11-74,((((((((Q93HM4_STRAW/25-88,Q9L164_STRCO/53-116),(WH42_STRCO/54-117,SCHA_STRHA/32-95)),CURD_STRCN/25-86),(O32459_9ACTO/14-77,(Q8KSV9_9ACTO/13-76,Q8KY33_STRCU/12-75))),((YQJZ_BACSU/21-82,Q9I1K5_PSEAE/256-317),((Q98DQ1_RHILO/10-73,Q8UFR0_AGRT5/10-73),(Q9S457_SALTY/10-73,Q8YJD4_BRUME/10-73)))),(((Q9HNN4_HALN1/410-473,(O32458_9ACTO/18-81,(Q8KSW0_9ACTO/14-79,Q9FD14_STRCU/17-80))),((((((Q92EH3_LISMO/10-82,(Q8NX62_STAAW/11-75,Q99X56_STAAM/10-74)),Q9K7R6_BACHD/10-74),(O31534_BACSU/27-91,Q9K649_BACHD/10-74)),Q9YCC3_AERPE/12-74),((YHGC_BACSU/74-136,Q8NUM1_STAAW/52-115),(Q9RXN8_DEIRA/10-73,Q9RX69_DEIRA/10-73))),((O54100_STRCO/38-102,(Q92N21_RHIME/10-77,(((Q9AE39_RHILE/10-77,Q8YC27_BRUME/10-77),Q98L66_RHILO/10-77),(Q93SH3_BRAJA/10-75,Q8UCM2_AGRT5/10-75)))),(O06156_MYCTU/11-74,(Q8NLF1_CORGL/11-74,Q8NMA1_CORGL/11-74))))),((Q96XB3_SULTO/36-99,Q97V29_SULSO/10-74),(((YCZJ_BACSU/10-68,Q9RTW6_DEIRA/32-90),Q8UKD4_AGRT5/10-68),Q9RSI3_DEIRA/19-82)))),(O68922_9ACTO/14-77,((O86482_STRAA/9-72,(Q54813_STRPE/21-91,(O54259_STRNO/21-84,Q9L552_9ACTO/21-84))),(Q9FC02_STRCO/23-88,Q8XYB2_RALSO/32-95)))),(Q983R7_RHILO/19-79,(((Q9X9W3_STRCO/138-196,Q9X9W3_STRCO/27-88),Q53908_STRCO/20-83),(TCMH_STRGA/19-82,Q9L4Y0_9ACTO/19-82))))),((((Q99IW7_9ZZZZ/10-70,(Q98HP0_RHILO/10-70,Q9A6W1_CAUCR/122-182)),(Q9ZBJ4_STRCO/11-73,Q8Y824_LISMO/13-76)),YGIN_ECOLI/12-83),((((((Q98HA4_RHILO/10-73,Q9ABN2_CAUCR/11-74),Q8U7C1_AGRT5/20-82),(Q9HHS4_HALN1/10-73,(Q930A7_RHIME/79-143,Q8UIT6_AGRT5/15-79))),(((((Q92Y06_RHIME/13-76,Q9I1R9_PSEAE/13-76),(Q9KLV5_VIBCH/10-73,Q8ZFU3_YERPE/11-74)),(O86332_MYCTU/13-75,(Q9RX23_DEIRA/12-76,Q8PEE0_XANCP/16-79))),(((((Q97DS8_CLOAB/10-74,(Q8PWK2_METMA/11-74,Q8TTU6_METAC/9-72)),Q8ZDH9_YERPE/10-73),(Y1783_SYNY3/58-121,Q92MY2_RHIME/10-73)),(Q9CHY3_LACLA/10-73,((YCNE_BACSU/10-73,(Q8YAL6_LISMO/10-73,(Q8Y476_LISMO/10-73,Q927R5_LISIN/10-73))),Q9JYI1_NEIMB/12-75))),(((O06569_MYCTU/10-73,Q9RKA2_STRCO/10-73),Q8NRX6_CORGL/10-72),Q8NRX5_CORGL/10-72))),(Q8KL47_RHIET/17-80,O33291_MYCTU/11-71))),(((Q9I6L9_PSEAE/11-73,Q9I267_PSEAE/52-115),Q930L9_RHIME/12-75),(Q9HYL5_PSEAE/10-74,Q9HY51_PSEAE/13-76))),((Q9X5D6_ZYMMO/15-78,Q9RSM4_DEIRA/27-90),Q9XAT7_RHOER/17-80)))),(((Q97SM8_STRPN/20-85,Q9CFE4_LACLA/11-76),Q93LN2_CYTJO/10-73),(((Q9I5L9_PSEAE/11-75,Q8UB57_AGRT5/14-77),(Q92VV2_RHIME/10-73,(Q9CLF6_PASMU/10-73,(YNEC_ECOLI/10-73,Q8ZIT1_YERPE/10-73)))),(Q8RDZ4_FUSNN/121-184,(Q9A6G2_CAUCR/10-74,Q8XW80_RALSO/20-84))))),Q96AZ7_HUMAN/9-71),AB2BP_HUMAN/304-366),O75547_HUMAN/164-226,Q9ESB4_RAT/260-322);
((((((Q8U5I6_AGRT5/11-74:1.07912,((((((((Q93HM4_STRAW/25-88:0.04176,Q9L164_STRCO/53-116:0.20423):0.12084,(WH42_STRCO/54-117:0.11068,SCHA_STRHA/32-95:0.13046):0.06087):0.04689,CURD_STRCN/25-86:0.15575):0.72049,(O32459_9ACTO/14-77:0.80550,(Q8KSV9_9ACTO/13-76:0.25544,Q8KY33_STRCU/12-75:0.22243):0.30188):0.56625):0.05714,((YQJZ_BACSU/21-82:0.29321,Q9I1K5_PSEAE/256-317:0.31078):0.76474,((Q98DQ1_RHILO/10-73:0.17742,Q8UFR0_AGRT5/10-73:0.35524):0.14438,(Q9S457_SALTY/10-73:0.54049,Q8YJD4_BRUME/10-73:0.13403):0.17754):0.64218):0.33070):0.07986,(((Q9HNN4_HALN1/410-473:1.01327,(O32458_9ACTO/18-81:0.35590,(Q8KSW0_9ACTO/14-79:0.19319,Q9FD14_STRCU/17-80:0.16566):0.11211):0.92335):0.06116,((((((Q92EH3_LISMO/10-82:0.62945,(Q8NX62_STAAW/11-75:0.27202,Q99X56_STAAM/10-74:0.18710):0.43734):0.02892,Q9K7R6_BACHD/10-74:0.47019):0.13178,(O31534_BACSU/27-91:0.33481,Q9K649_BACHD/10-74:0.13569):0.54711):0.01237,Q9YCC3_AERPE/12-74:0.67291):0.31022,((YHGC_BACSU/74-136:0.42507,Q8NUM1_STAAW/52-115:0.88583):0.31925,(Q9RXN8_DEIRA/10-73:0.52896,Q9RX69_DEIRA/10-73:0.30281):0.21958):0.08953):0.11530,((O54100_STRCO/38-102:0.78260,(Q92N21_RHIME/10-77:0.10467,(((Q9AE39_RHILE/10-77:0.24880,Q8YC27_BRUME/10-77:0.26130):0.06015,Q98L66_RHILO/10-77:0.17296):0.07375,(Q93SH3_BRAJA/10-75:0.44709,Q8UCM2_AGRT5/10-75:0.30067):0.19026):0.24503):0.53679):0.25976,(O06156_MYCTU/11-74:0.17518,(Q8NLF1_CORGL/11-74:0.17026,Q8NMA1_CORGL/11-74:0.49070):0.28988):0.31394):0.19780):0.36061):0.11830,((Q96XB3_SULTO/36-99:0.14556,Q97V29_SULSO/10-74:0.41957):0.53384,(((YCZJ_BACSU/10-68:0.52598,Q9RTW6_DEIRA/32-90:0.26011):0.30663,Q8UKD4_AGRT5/10-68:0.94046):0.14835,Q9RSI3_DEIRA/19-82:1.01464):0.32432):0.10093):0.09693):0.29367,(O68922_9ACTO/14-77:0.75488,((O86482_STRAA/9-72:0.69257,(Q54813_STRPE/21-91:0.40319,(O54259_STRNO/21-84:0.39211,Q9L552_9ACTO/21-84:0.31544):0.14613):0.20659):0.17598,(Q9FC02_STRCO/23-88:0.97896,Q8XYB2_RALSO/32-95:0.51138):0.23529):0.08348):0.19603):0.23584,(Q983R7_RHILO/19-79:0.51785,(((Q9X9W3_STRCO/138-196:0.28956,Q9X9W3_STRCO/27-88:1.21937):0.32322,Q53908_STRCO/20-83:0.50627):0.17869,(TCMH_STRGA/19-82:0.19360,Q9L4Y0_9ACTO/19-82:0.36994):0.28483):0.23308):0.35013):0.09450):0.21509,((((Q99IW7_9ZZZZ/10-70:0.20985,(Q98HP0_RHILO/10-70:0.34032,Q9A6W1_CAUCR/122-182:0.22560):0.09472):0.13784,(Q9ZBJ4_STRCO/11-73:0.63474,Q8Y824_LISMO/13-76:0.54584):0.34637):0.61480,YGIN_ECOLI/12-83:0.97155):0.17538,((((((Q98HA4_RHILO/10-73:0.59228,Q9ABN2_CAUCR/11-74:0.29319):0.34367,Q8U7C1_AGRT5/20-82:0.86093):0.13638,(Q9HHS4_HALN1/10-73:0.61796,(Q930A7_RHIME/79-143:0.38518,Q8UIT6_AGRT5/15-79:0.22385):0.61406):0.14389):0.27610,(((((Q92Y06_RHIME/13-76:1.04050,Q9I1R9_PSEAE/13-76:0.35239):0.25870,(Q9KLV5_VIBCH/10-73:0.66127,Q8ZFU3_YERPE/11-74:0.41766):0.16603):0.12468,(O86332_MYCTU/13-75:0.58284,(Q9RX23_DEIRA/12-76:0.49600,Q8PEE0_XANCP/16-79:0.93015):0.13155):0.28447):0.14536,(((((Q97DS8_CLOAB/10-74:0.49613,(Q8PWK2_METMA/11-74:0.11189,Q8TTU6_METAC/9-72:0.18374):0.29637):0.26553,Q8ZDH9_YERPE/10-73:0.70956):0.12815,(Y1783_SYNY3/58-121:0.51376,Q92MY2_RHIME/10-73:0.58863):0.21915):0.00000,(Q9CHY3_LACLA/10-73:0.71382,((YCNE_BACSU/10-73:0.28638,(Q8YAL6_LISMO/10-73:0.24643,(Q8Y476_LISMO/10-73:0.20325,Q927R5_LISIN/10-73:0.10176):0.26089):0.33647):0.18427,Q9JYI1_NEIMB/12-75:0.34683):0.11284):0.13313):0.13144,(((O06569_MYCTU/10-73:0.33465,Q9RKA2_STRCO/10-73:0.19263):0.36856,Q8NRX6_CORGL/10-72:0.13077):0.12215,Q8NRX5_CORGL/10-72:0.50874):0.54837):0.12156):0.04329,(Q8KL47_RHIET/17-80:0.69745,O33291_MYCTU/11-71:0.96967):0.11709):0.00000):0.12286,(((Q9I6L9_PSEAE/11-73:0.50126,Q9I267_PSEAE/52-115:0.36207):0.61930,Q930L9_RHIME/12-75:0.57379):0.16999,(Q9HYL5_PSEAE/10-74:0.77399,Q9HY51_PSEAE/13-76:0.32210):0.21004):0.18633):0.01566,((Q9X5D6_ZYMMO/15-78:0.77161,Q9RSM4_DEIRA/27-90:0.79538):0.39948,Q9XAT7_RHOER/17-80:0.91376):0.15905):0.09382):0.08943):0.13001,(((Q97SM8_STRPN/20-85:0.48212,Q9CFE4_LACLA/11-76:0.12691):1.26254,Q93LN2_CYTJO/10-73:1.10983):0.24806,(((Q9I5L9_PSEAE/11-75:0.75457,Q8UB57_AGRT5/14-77:0.51369):0.24927,(Q92VV2_RHIME/10-73:0.33948,(Q9CLF6_PASMU/10-73:0.23230,(YNEC_ECOLI/10-73:0.13722,Q8ZIT1_YERPE/10-73:0.20224):0.31239):0.15204):0.17864):0.20625,(Q8RDZ4_FUSNN/121-184:0.97232,(Q9A6G2_CAUCR/10-74:0.54734,Q8XW80_RALSO/20-84:0.59054):0.38400):0.17172):0.04630):0.11569):0.58577,Q96AZ7_HUMAN/9-71:0.42845):0.20367,AB2BP_HUMAN/304-366:0.48010):0.45577,O75547_HUMAN/164-226:0.12587,Q9ESB4_RAT/260-322:0.16019);