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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03965 phylogeny
for nucleotide alignment


 
(((((((((((((((Q9CHA6_LACLA/8-122,(Q8CWY7_STRMU/4-118,Q8CX17_STRA5/3-117)),(Q8K646_STRP3/4-118,(((Q74HB2_LACJO/9-123,YPTY_LACSK/8-122),(COPY_ENTHR/10-124,Q88SN8_LACPL/9-123)),Q8CX08_STRA5/10-124))),Q820V2_ENTFA/9-123),Q8DQJ7_STRR6/13-127),(Q8YAA2_LISMO/6-122,((((MECI_STASR/8-122,BLAI_STAEP/8-122),Q97DN4_CLOAB/7-121),(BLAI_BACLI/7-121,Q81U16_BACAN/8-123)),Q8RAW1_THETN/7-122))),((O59261_PYRHO/17-122,Q8U0J1_PYRFU/17-122),Q81S93_BACAN/17-132)),((Q8A0X2_BACTN/4-117,Q8A9K3_BACTN/4-117),Q8AA30_BACTN/7-120)),Q8RPJ5_DESHA/6-116),(Q8P5X7_XANCP/21-134,((Q9A2P9_CAUCR/3-117,Q9A854_CAUCR/3-117),Q9A7T0_CAUCR/25-139))),(((Q7NDR0_GLOVI/51-167,Q7NJ05_GLOVI/21-134),((P72695_SYNY3/14-131,Q8YTZ4_ANASP/14-131),Q7NMJ8_GLOVI/14-131)),((Q7X2Y4_9BACT/10-124,Q8PED6_XANCP/6-120),((Q7UFN9_RHOBA/9-123,Q7UP31_RHOBA/14-128),Q7TU00_RHOBA/9-124)))),(Q7NCK1_GLOVI/19-133,(Q7UYB1_RHOBA/16-130,Q7UHG6_RHOBA/10-123))),((Q8NUB9_CORGL/10-118,Q8FSR7_COREF/10-118),Q6XN46_RHOER/4-115)),O32909_MYCLE/7-121),(Q825U7_STRAW/18-127,Q9RD43_STRCO/26-135)),O86627_STRCO/17-126,Q82NX3_STRAW/11-120);
(((((((((((((((Q9CHA6_LACLA/8-122:0.39633,(Q8CWY7_STRMU/4-118:0.35389,Q8CX17_STRA5/3-117:0.29232):0.09253):0.06461,(Q8K646_STRP3/4-118:0.42145,(((Q74HB2_LACJO/9-123:0.43373,YPTY_LACSK/8-122:0.24436):0.08022,(COPY_ENTHR/10-124:0.29530,Q88SN8_LACPL/9-123:0.38602):0.11019):0.10939,Q8CX08_STRA5/10-124:0.31067):0.08348):0.08529):0.07978,Q820V2_ENTFA/9-123:0.39630):0.10111,Q8DQJ7_STRR6/13-127:0.41415):0.14127,(Q8YAA2_LISMO/6-122:0.48107,((((MECI_STASR/8-122:0.18602,BLAI_STAEP/8-122:0.35068):0.15355,Q97DN4_CLOAB/7-121:0.28368):0.07470,(BLAI_BACLI/7-121:0.36444,Q81U16_BACAN/8-123:0.31252):0.11863):0.07946,Q8RAW1_THETN/7-122:0.28974):0.08497):0.06896):0.07783,((O59261_PYRHO/17-122:0.14614,Q8U0J1_PYRFU/17-122:0.18895):0.39280,Q81S93_BACAN/17-132:0.48147):0.24190):0.05486,((Q8A0X2_BACTN/4-117:0.28218,Q8A9K3_BACTN/4-117:0.35912):0.20039,Q8AA30_BACTN/7-120:0.25681):0.31010):0.36658,Q8RPJ5_DESHA/6-116:0.47284):0.13941,(Q8P5X7_XANCP/21-134:0.26244,((Q9A2P9_CAUCR/3-117:0.17801,Q9A854_CAUCR/3-117:0.28256):0.08634,Q9A7T0_CAUCR/25-139:0.15558):0.10146):0.17621):0.09761,(((Q7NDR0_GLOVI/51-167:0.42997,Q7NJ05_GLOVI/21-134:0.33358):0.20022,((P72695_SYNY3/14-131:0.24426,Q8YTZ4_ANASP/14-131:0.26671):0.25373,Q7NMJ8_GLOVI/14-131:0.14118):0.32677):0.08273,((Q7X2Y4_9BACT/10-124:0.26891,Q8PED6_XANCP/6-120:0.21008):0.23964,((Q7UFN9_RHOBA/9-123:0.53118,Q7UP31_RHOBA/14-128:0.35100):0.15376,Q7TU00_RHOBA/9-124:0.52911):0.07926):0.09884):0.05352):0.04789,(Q7NCK1_GLOVI/19-133:0.41782,(Q7UYB1_RHOBA/16-130:0.63052,Q7UHG6_RHOBA/10-123:0.37384):0.13967):0.09781):0.15953,((Q8NUB9_CORGL/10-118:0.21360,Q8FSR7_COREF/10-118:0.12777):0.35112,Q6XN46_RHOER/4-115:0.36642):0.08258):0.06713,O32909_MYCLE/7-121:0.44316):0.21404,(Q825U7_STRAW/18-127:0.18183,Q9RD43_STRCO/26-135:0.10030):0.15755):0.12420,O86627_STRCO/17-126:0.11354,Q82NX3_STRAW/11-120:0.14403);