EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03963 alignment
(14 sequences with 585 bp)


Q9WZE1_THEMA/2-140 ATCTACGACATGAGCGGTATATACCTTTCTTCTCTTACAGGAATAAGAAATAATTCCAGC------------------...------TCTTCGAGTAATTCTCTAGACAAGGAAGCTTTTCTCAGACTCCTTCTTCAAGAACTGGAAATGCAGGATCCACTGGAGCCCATGGAAACGAAGGACATGATCTCTCAGCTTTCTCAGCTCACGAGCCTTGAACAG---------............................................................---ATCACGAACCTCACCAGTGCGGTGAAGGATTTCGTCGAAGCTCAAACGAGT..........................................GTGAGCCCAGCCCAGCTCGCTTCTCTGATAGGAAAGTACGTCGTGGTGAGAAACAACACGGTGAATCTT---------GTAGGCGGTCAGTCGGACAGCATCATATTCAACGTGGATGAAGATGCACATGTT---------......---GTGGTTCAAATACTTGACGAAAACGGGAAATTGGTGAGAACAGAAGAT
Q9ZKU2_HELPJ/2-184 GCCATTGATTTAGCAGAAGTTACAGGAGCTAAAGCCGCGCAAGAAAGGAAAAAAGAACAGCCC---------------...------ACCATCGCTAACGGGTTGGATAAAAACGCTTTCATGAAACTCTTTTTAGAGCAATTGAAAAATCAAGACCCCACCGCTCCTATGGAAACGGATAAAATCATCACCCAAACCGCGCAACTCACGCAAGTGGAAATGCAAGAAGAAaacaaaaagaccatgcaagaagtcgccagtgcgatgaaatccaataaagaaactaacgaaTCTTTAAAAGACTTTCAAGGCGCTTTAAAAGACACCATGGAAAACCTGAACAAAggcatggacgatagcttaaaggctaacaacgctttaagggaaGTAAGCGCCCTTAATTCTGTGAGCATGATAGGCAAAATCGCTGAAACCGATGTGAGTGGGGCGAATTTT---------GACGGCAACAACAAGCTTTCTTTTTCGCTCTTTTTTGATGAAAAAATTGACGCTTCTAAAGGAgtg...CCAGCGATTCAAATCTTAAACGAAAACAATGAATTGGTCAAAACGATTCCT
Q9PJ69_CAMJE/14-170 ACAACTTCAGGTACTACTTCTTCAGGAAGTACTAGTGGAACAACTAGAACAGATTCAAGCAGTAGCTCAGGAATA---...GTGAGCAATCCAAATGCTACCTTAGATAAGGATGCGTTTTTAAAACTTCTTTTGATAGAGCTTCAACATCAAGATCCAACAGATCCTATGGATAGCGATAAAATGCTTACTCAAACTTCACAGCTTAGTGCACTTGAAATGCAGCAAAAT............................................................ACCAATACAACTATGCAAAAAATGGTTGAAACTATGCAAAAGCTTTCTGATTCT...............tttagt..................acaAGTATGAGTACTTCAGCTTTAGGGGCTATTGGTAAAATGGCAACTGTTTCAGATAATAAAATCAAACTT---------ACAGGTGCAGATGAGCTTATCGCTCTTAAAATGTATTTGCCTGAAGATTCTGATGAAAACGGT......GTTACGCTAGAAATTTATGATAGCAATAATAAACTTGTTTTCAGTGAAAAA
O85689_CAUCR/2-139 GCCACCGCCGTCTCGTCGCAGAACACCGCCTCGGTCCTTGACCGGATCAATAACTCCCGC------------------...---------ACGTCGCTGGCGACCAACAAGGAGACCTTCCTGCAGCTGCTGACCACGCAGTTGAAGAACCAGGATCCCCTGTCGCCGACCGACACCACCCAGATGACCCAGCAGATCACGCAGATGACCGGCGTGGAGCAGCAG------............................................................------CTGGTCACCAACGACCTGCTGGCCGCGCTGGTCGGCATGAACACCGGC..........................................ACGGGCCTGTCCGAGGGCGTGGCGATGATCGGCAAGCAGGTCGCCGCCATCAGCGACACCTCGACCCTG---------AAGGACGGCAAGGCGACCTTCTCCTGGACCCAGCCCAGCGCCTCGGCCTCGCTGAAG------......------GTCGAGATCAAGAACGCCTCCGGCAAGGTGGTTCGCACCCTGACG
Q98HB6_RHILO/2-133 ACCGTGGACATGACGACGACGATACCGGTCGGTGCCAATTCGACCACCAAGTCGACCTCG------------------...------------AAGACAGCGGTCGACTACCAGTCTTTCCTGAAGCTTCTGATTGCCGAGATGAAGAACCAGGATCCGACCAAGCCGATGGATTCGACGCAGTACGTCGCCCAGCTCGCCACCTTCTCGCAGGTCGAGCAA---------............................................................---------TCGGTGCAGAGCAACACCAAACTCGACCAGATCATGCAGTCCTCG..........................................---GCGCTGTCGCAGGCCGATGCGATCATCGGCCGCTCGATCACGTCGGCCGACGGCAAGACCACCGGA---------ATAGTGGCTTCGGTGACGCTCGCCAGCAGCGGACTGATCGCAGTGTTGCAGGATGGC------......------------ACCAAGGTCCCCGTCGGCCCGGGCGTGTCGATCAAGCCG
Q9KQ09_VIBCH/9-150 CAAAGCGGCTTGTCCTATATTGATCAGCTTAAAGCTCTTCAAGAGCAGAAAAAGCCGGATGAA---------------...---ACCACAGGGCAGAAATCCCTGAAACAAGAAGACTTTCTTTCTTTGCTGACCAAGCAGTTAGCACAGCAAGATCCGTTCAAACCCGTGAGTAACGATCAGATGATTGCGCAGATGGCTTCATTTGCGACCGTTGATGGC---------............................................................---ATTGGCAAGATGAACACTCAGTTTGAGAGTCTCAACTCATCAATGACCTCT..........................................AACCAAGCGCTGCAAGCGTCATCACTGGTAGGGCGTGACGTGCTAGTGCCGGGGGCGGCAGGAATGAAA---------AAGCCTGATGGCGGTATGGCGGCAATGGTGAAACTGCCGCAGTCGATCGATAAC---------......TTGTTCATCCGTATTGAGAATGAAGCTGGTCAATTGGTACGAACCTTTGAC
Q9I4Q0_PSEAE/6-154 GTCAGCGGCACCAGCAGCAACACCGGCAACGTCAACGGCAGCAAGCGCGCCGCCGGCAGCGGCGCCACCGAGACCGGGcagAGCGTCAAGGGCAGCAGCAACCTTGGCAAGGACGAATTCCTCAAGCTGCTGGTGGCCCAGTTGAAGAACCAGGACCCGATGTCGCCGCAGCAGAACGGCGAGTTCATCGCCCAACTGGCCCAGTTCAGCACCGTGGAAGGC---------............................................................---GTGCAGTCGCTGAACAAGAGCATGGAGAGCATTCTCTCCAACTACCAGTCG..........................................TCGCAGGCCCTGCAAGCCTCGTCGCTGGTGGGGCGCAAGGTCATCGTGGCGACCGACAAGTCGGTGGTG---------GACACCAAGGACACCTTCAAGGCGTCCCTCAACCTGCCGGTCTCCAGCAGCAAC---------......GTATGGGTCAACGTCTACGACGACAAGGGCACCGTGGTCAATCGCATCAAC
FLGD_BUCAI/10-155 GATATCAATTTACCCAATATTCAACCACCTATTATAAATAATGAAGCTGTCAAAAAAAATGATAATAATTTACCA---...---AATGACATCAACCCACCAGATTTACAAAAAAATTTTTTAAGTCTATTAATTGCACAAATTAAAAATCAAGATCCTACTGATCCTATTAAAAACTCTGATTTGACATCACAATTAGCTCAAATTAATACAGCAAGTGGA---------............................................................---ATGCAAAAACTAAACAATACCGTGGATCAATTCTCAAATCAAATCAGCAAA..........................................AATCAAAATATCCAATTATCTACATTAATTGGACGTCATGTGATGGTGCCTAATAAAAAAATAATACAT---------ACTAAAGATACGAAAACACAATTTGGTATCGAATTATTTGAAAAAGCTACTTCA---------......GTTGAAATAAAAATTACAGATGACAACAACAAAACTTTATATCTGAAACAA
FLGD_ECOLI/2-151 TCCATTGCGGTAACCACCACCGATCCGACAAATACCGGCGTCAGTACCACCAGCAGTAGTTCG---------------...CTCACGGGCAGCAACGCCGCAGATTTACAAAGCAGTTTTCTGACTTTGCTGGTGGCGCAGCTGAAAAACCAGGACCCGACCAATCCAATGGAAAACAACGAGCTGACGTCGCAATTGGCACAAATCAGCACGGTCAGCGGG---------............................................................---ATTGAAAAACTCAATACCACGCTCGGATCTATTTCCGGACAGATTGATAAC..........................................AGCCAGTCGTTACAGGCCAGTAACCTGATCGGTCACGGCGTGATGATCCCCGGCACCACTGTTCTTGCGGGAACCGGCAGTGAAGAAGGGGCTGTGACCACGACCACGCCGTTTGGTGTTGAGCTGCAACAGGCGGCAGACaaa...GTTACGGCCACCATCACCGATAAAAATGGCGCGGTTGTGCGCACCATTGAT
Q44920_BORBU/4-147 ATAAACGGTGTTGAAAATGTTTTTAATTTAAATATTAGCAATAAAGTTAAAAAAAAAACAGATTTTAATGTTGACAAT...---ATATCTAATAAGGTTAATCTTGGCAAGGATGATTTTTTAAAGTTACTCATTACTCAACTTAGGTATCAAGACCCTACAAATCCAATGAAGGATAAAGAATTTATTGCGCAAATGGCGCAATTTTCGGCTCTTGAGCAA---------............................................................------------ATGGCTAATATGAGTAGATCGTTTGAAAAACTTTCATCTTCT..........................................TTAGAAATAAGAAAAGATTTGGATTTATTAGGTAAAGTAATTAAATTTCAGCATGGTGATGGGGAGATT---------GTTGAGGGTCGCGTCACAAACATTAAGACAGGCGCAATACCTCAAGTTATGGTTAAT------......---GGTAATTATTATGTATATAAAAATATATTATCGGTAGGTTTGGAGGAA
O07893_TREPA/8-151 CGGTTTGAAATGACCGCCGCTGAGCGTACGCGTTTAGAAATGGATGTGCGCGTTATAAACAAGCAGCTTGAGGCAGGC...GCGCGCAGTGCGAAGCGGGAGTTAGGAAAGGACGATTTTTTGCATCTCCTTATTGCGCAGCTTACCCATCAGGATCCTACTGCGCCTATGCAGGACACGCAGTTTATTGCGCAAATGGCGCAATTTTCCTCGCTCGAGCAG---------............................................................---ATGGCCAACATGAGTGCGCAGGTAGAGAAGCTCGGAACGCTGTTTGGCAAT..........................................---------ACTGAAGCGCTGCAGGCGGTGGGAAAAATGGTTGAAGTCACTGAGGCGGATAACACTGTT------------CGTGGGCTTATCAGTGCAGTCACCCGTGCTGACAAGCCCCAGGTGCGGGTGGGG------......---TCGCACTGGTACGAATGGGAGCACGTCAAGGTGATTGCAGATCCGAGT
Q9KA39_BACHD/1-143 GTGACGACAACAAACGGTATTGATGGCTCGTACTATTACGAAAATCGCCCGAAAGAACAA------------------...------AGCAACTCGGGAATCTTAGGAAAAGATGATTTTCTGAGAATCCTCATTGCCCAGCTTCAGTATCAAGACCCGCTGAATCCAATGGATGACCGTGAATTTATCGCACAGATGGCGCAGTTCTCATCCTTGGAACAA---------............................................................---ATGACAAACATGAACAGCGCGATTCAACAGTTTGTTAAACAGCAAACAAGT..........................................CAAACGCTTGTCCAGCATAGCGAATTAATTGGTAAGCGTGTGACGTGGAAGCGGATCATTGATATAGAT---------GAGTACAGACAAAAAGAAGAGCTTGTTGAAAACACCGTTACATCTGTAAGGCTTGAAACGAAC......GGAAATGTTAGCATTCAGCTCGATAGTGGACGTTGGATATCTGCCGATCAA
YLXG_BACSU/1-139 ATGACTTCTATAAGTTCAGAATATAAACTGCCTGAAAAAACGAACACTGTGTCGACGAAC------------------...------------AACAGCAGCTTGGGGAAAGACGAGTTTTTAAAAATATTAATGACTCAAGTTCAAAACCAAGATCCGCTTAACCCGATTGACGATAAAGAATTTATCAGCCAGATGGCGACTTTTTCAAGCTTGGAGCAA---------............................................................---ATGATGAATCTGAATACGACAATGACTCAATTCGTTGAAAACCAAGATCCG..........................................------TTTACAACGTATGTTGATTGGATGGGAAAAGAAGTATCTTGGACTGATGGTAAAAGTGCAACA---------GATAAAACAGGCACAGTAAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGAT......GATGGGACCGAGATCAGTCCTGCGAATGTCATGTCTGTGGGACAATCATCT
O67710_AQUAE/2-148 GAATTTTACGACCCGAAAGTAAAGCAGGAAATAAAAGTACTGCCAAAGGACTACGTCCAGTCC---------------...------------GTGGATAACATGTCCGCAAACGACTTTTTAAAGATATACCTGGAAACCTTACGTTATCAGGATCCCTTTAACCAAACTGACATCTCAAAAAGTTTGGACGATATGGTAAAGATAAACCAGATAAAGTAC---------............................................................---TTCACCGAAATGAAACAATTCCTCGAAAGCCTGAAGGCGTGGATGAACCAG..........................................ATGACGTTCTTAAACACCGCTACTCTAATAGGAAAAGAATTTATCTTCAGGACTGAAGTTTTAGACACTATAAAGAGGGATAAATACTATATACTTTCACCGGAAAACGTTAACAACGCGAAAATAAGGGTTTACGACGGAgaagaaCTCGTTAAAGAGGTAAAAATTGATATAAAAAAGGGTTTGAACGAGATAGAC