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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03963 alignment
(14 sequences with 195 aa)


Q9WZE1_THEMA/2-140 IYDMSGIYLSSLTGIRNNSS------.--SSSNSLDKEAFLRLLLQELEMQDPLEPMETKDMISQLSQLTSLEQ---....................-ITNLTSAVKDFVEAQTS..............VSPAQLASLIGKYVVVRNNTVNL---VGGQSDSIIFNVDEDAHV---..-VVQILDENGKLVRTED
Q9ZKU2_HELPJ/2-184 AIDLAEVTGAKAAQERKKEQP-----.--TIANGLDKNAFMKLFLEQLKNQDPTAPMETDKIITQTAQLTQVEMQEEnkktmqevasamksnketneSLKDFQGALKDTMENLNKgmddslkannalreVSALNSVSMIGKIAETDVSGANF---DGNNKLSFSLFFDEKIDASKGv.PAIQILNENNELVKTIP
Q9PJ69_CAMJE/14-170 TTSGTTSSGSTSGTTRTDSSSSSGI-.VSNPNATLDKDAFLKLLLIELQHQDPTDPMDSDKMLTQTSQLSALEMQQN....................TNTTMQKMVETMQKLSDS.....fs......tSMSTSALGAIGKMATVSDNKIKL---TGADELIALKMYLPEDSDENG..VTLEIYDSNNKLVFSEK
O85689_CAUCR/2-139 ATAVSSQNTASVLDRINNSR------.---TSLATNKETFLQLLTTQLKNQDPLSPTDTTQMTQQITQMTGVEQQ--....................--LVTNDLLAALVGMNTG..............TGLSEGVAMIGKQVAAISDTSTL---KDGKATFSWTQPSASASLK--..--VEIKNASGKVVRTLT
Q98HB6_RHILO/2-133 TVDMTTTIPVGANSTTKSTS------.----KTAVDYQSFLKLLIAEMKNQDPTKPMDSTQYVAQLATFSQVEQ---....................---SVQSNTKLDQIMQSS..............-ALSQADAIIGRSITSADGKTTG---IVASVTLASSGLIAVLQDG--..----TKVPVGPGVSIKP
Q9KQ09_VIBCH/9-150 QSGLSYIDQLKALQEQKKPDE-----.-TTGQKSLKQEDFLSLLTKQLAQQDPFKPVSNDQMIAQMASFATVDG---....................-IGKMNTQFESLNSSMTS..............NQALQASSLVGRDVLVPGAAGMK---KPDGGMAAMVKLPQSIDN---..LFIRIENEAGQLVRTFD
Q9I4Q0_PSEAE/6-154 VSGTSSNTGNVNGSKRAAGSGATETGqSVKGSSNLGKDEFLKLLVAQLKNQDPMSPQQNGEFIAQLAQFSTVEG---....................-VQSLNKSMESILSNYQS..............SQALQASSLVGRKVIVATDKSVV---DTKDTFKASLNLPVSSSN---..VWVNVYDDKGTVVNRIN
FLGD_BUCAI/10-155 DINLPNIQPPIINNEAVKKNDNNLP-.-NDINPPDLQKNFLSLLIAQIKNQDPTDPIKNSDLTSQLAQINTASG---....................-MQKLNNTVDQFSNQISK..............NQNIQLSTLIGRHVMVPNKKIIH---TKDTKTQFGIELFEKATS---..VEIKITDDNNKTLYLKQ
FLGD_ECOLI/2-151 SIAVTTTDPTNTGVSTTSSSS-----.LTGSNAADLQSSFLTLLVAQLKNQDPTNPMENNELTSQLAQISTVSG---....................-IEKLNTTLGSISGQIDN..............SQSLQASNLIGHGVMIPGTTVLAGTGSEEGAVTTTTPFGVELQQAADk.VTATITDKNGAVVRTID
Q44920_BORBU/4-147 INGVENVFNLNISNKVKKKTDFNVDN.-ISNKVNLGKDDFLKLLITQLRYQDPTNPMKDKEFIAQMAQFSALEQ---....................----MANMSRSFEKLSSS..............LEIRKDLDLLGKVIKFQHGDGEI---VEGRVTNIKTGAIPQVMVN--..-GNYYVYKNILSVGLEE
O07893_TREPA/8-151 RFEMTAAERTRLEMDVRVINKQLEAG.ARSAKRELGKDDFLHLLIAQLTHQDPTAPMQDTQFIAQMAQFSSLEQ---....................-MANMSAQVEKLGTLFGN..............---TEALQAVGKMVEVTEADNTV----RGLISAVTRADKPQVRVG--..-SHWYEWEHVKVIADPS
Q9KA39_BACHD/1-143 MTTTNGIDGSYYYENRPKEQ------.--SNSGILGKDDFLRILIAQLQYQDPLNPMDDREFIAQMAQFSSLEQ---....................-MTNMNSAIQQFVKQQTS..............QTLVQHSELIGKRVTWKRIIDID---EYRQKEELVENTVTSVRLETN..GNVSIQLDSGRWISADQ
YLXG_BACSU/1-139 MTSISSEYKLPEKTNTVSTN------.----NSSLGKDEFLKILMTQVQNQDPLNPIDDKEFISQMATFSSLEQ---....................-MMNLNTTMTQFVENQDP..............--FTTYVDWMGKEVSWTDGKSAT---DKTGTVSSVKHFKGNYYLVLD..DGTEISPANVMSVGQSS
O67710_AQUAE/2-148 EFYDPKVKQEIKVLPKDYVQS-----.----VDNMSANDFLKIYLETLRYQDPFNQTDISKSLDDMVKINQIKY---....................-FTEMKQFLESLKAWMNQ..............MTFLNTATLIGKEFIFRTEVLDTIKRDKYYILSPENVNNAKIRVYDGeeLVKEVKIDIKKGLNEID