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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03960 phylogeny
for restricted amino acid alignment


 
(((((((SPX_STRPY/5-115,SPX1_LACLA/5-115),(SPX_BACSU/5-115,SPX_BACHD/5-115)),(Q99XP2_STRPY/5-115,SPX_LACLC/5-115)),YQGZ_BACSU/8-118),(((((ARSC_HAEIN/6-116,Q9CLS9_PASMU/6-116),(Q9KQ39_VIBCH/6-116,(YFGD_ECOLI/8-119,(ARSC_NEIMB/7-117,Q9I508_PSEAE/7-117)))),((Q9A861_CAUCR/11-121,((ARSC_ECOLI/7-117,Q98J03_RHILO/6-116),(Q9A083_STRPY/7-117,Q9CJQ0_PASMU/6-116))),Q9CD46_MYCLE/1-104)),(((Q9CHE4_LACLA/5-116,(YUSI_BACSU/6-118,Q9K785_BACHD/6-118)),(((Q9PH31_XYLFA/11-122,((YFFB_HAEIN/5-114,Q9CM21_PASMU/5-114),((Q986E7_RHILO/6-115,(Q9A7S8_CAUCR/22-131,Q9HXX5_PSEAE/6-115)),(YFFB_ECOLI/5-116,Q9KQ54_VIBCH/22-131)))),Q9JZ90_NEIMB/5-116),Q9PPJ0_CAMJE/4-109)),Q9RY16_DEIRA/19-127)),((Q9CFZ8_LACLA/8-121,Q9CGN5_LACLA/5-115),(Q9CFY7_LACLA/5-117,Q9CH93_LACLA/5-115)))),Y176_UREPA/5-122),Y127_MYCGE/17-133,Y127_MYCPN/16-132);
(((((((SPX_STRPY/5-115:0.17116,SPX1_LACLA/5-115:0.26153):0.12916,(SPX_BACSU/5-115:0.07445,SPX_BACHD/5-115:0.20448):0.17296):0.10372,(Q99XP2_STRPY/5-115:0.34377,SPX_LACLC/5-115:0.32188):0.17794):0.04322,YQGZ_BACSU/8-118:0.62622):0.04688,(((((ARSC_HAEIN/6-116:0.16530,Q9CLS9_PASMU/6-116:0.26198):0.28973,(Q9KQ39_VIBCH/6-116:0.20938,(YFGD_ECOLI/8-119:0.26820,(ARSC_NEIMB/7-117:0.37811,Q9I508_PSEAE/7-117:0.30094):0.08698):0.09448):0.03371):0.15852,((Q9A861_CAUCR/11-121:0.42718,((ARSC_ECOLI/7-117:0.27208,Q98J03_RHILO/6-116:0.24897):0.06845,(Q9A083_STRPY/7-117:0.24654,Q9CJQ0_PASMU/6-116:0.22857):0.13011):0.05304):0.21134,Q9CD46_MYCLE/1-104:1.10473):0.17671):0.61159,(((Q9CHE4_LACLA/5-116:0.46379,(YUSI_BACSU/6-118:0.14970,Q9K785_BACHD/6-118:0.16849):0.20481):0.30619,(((Q9PH31_XYLFA/11-122:0.83499,((YFFB_HAEIN/5-114:0.08829,Q9CM21_PASMU/5-114:0.20187):0.47975,((Q986E7_RHILO/6-115:0.33762,(Q9A7S8_CAUCR/22-131:0.19114,Q9HXX5_PSEAE/6-115:0.23506):0.11892):0.27145,(YFFB_ECOLI/5-116:0.43639,Q9KQ54_VIBCH/22-131:0.42033):0.15919):0.01796):0.23791):0.09727,Q9JZ90_NEIMB/5-116:0.45601):0.23822,Q9PPJ0_CAMJE/4-109:0.79370):0.24730):0.15169,Q9RY16_DEIRA/19-127:1.28217):0.08951):0.59414,((Q9CFZ8_LACLA/8-121:0.87364,Q9CGN5_LACLA/5-115:0.35792):0.13785,(Q9CFY7_LACLA/5-117:0.39074,Q9CH93_LACLA/5-115:0.32305):0.10506):0.08687):0.00000):0.35886,Y176_UREPA/5-122:0.82272):0.47108,Y127_MYCGE/17-133:0.02217,Y127_MYCPN/16-132:0.17525);