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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03960 alignment
(40 sequences with 124 aa)


Q9RY16_DEIRA/19-127 FGTKKSTATRAAERFFKERGVKVHFVDVSAKPMSKGELTRFVQKFG--.VNALLDTEGKAYERAN-...-LAYLRTTE.DSVVAKMLDDPALLRLPLVRGG-.....KVLSVGEDQEAWGKMLE
Q9KQ39_VIBCH/6-116 YHNPKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQLGLNeVRAMMRCKEELYKELN-...-LGDSQLSD.DALFAAMAEHPKLIERPIVVCN-.....GQARHGRPPEQVLEIL-
YFGD_ECOLI/8-119 YHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAATLRDLLKILGMNsARELMRQKEDLYKELN-...-LADSSLSE.EALIQAMVDNPKLMERPIVVAN-.....GKARIGRPPEQVLEIVG
Q9I508_PSEAE/7-117 LHNPRCSKSRAALELLEARGLQPQVVRYLETPPSAAELKAILAKLGIP.ARQLLRTGEDEYKALG-...-LDEPSLGE.EAIIEAMARHPKLIERPVLVAG-.....DKAVVGRPPERVLEILA
ARSC_NEIMB/7-117 FHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSELKDIFNKLGLAsARGMMRVKDDLYKELG-...-LDNPNLDN.DALLRAIADHPALLERPIVLAN-.....GKAAVGRPLENIEAVL-
Q9CLS9_PASMU/6-116 YHNPRCSKSRETLALLEAKYGQPKIELYLEQQFSASQLQQIAQKLGVTsFREMMRTKDELYRDLG-...-LDKPEVSE.QQLLEALVAHSSLLERPIVIHG-.....DKAKIGRPPESVLEIL-
ARSC_HAEIN/6-116 YHNPHCSKSRETLALLENKGIQPIIELYLQKQYSVNELQSIAKKLGIDdVRQMMRTKDELYKSLN-...-LDNLDLSQ.AELFKAISEHSALIERPIVING-.....DKAKIGRPPETVLEIL-
Q9CJQ0_PASMU/6-116 YHNSNCGTSRNVLALIRHAGIEPQVIEYLKNPPSETTLRNLIKRMGIT.PRQLLRTNVVPYETLG-...-LQNEKLSD.DELISAMLREPILINRPIVVSE-.....KGVKLCRPSETVLAFLP
Q9A083_STRPY/7-117 YHNPNCGTSRNVLAMIRHAGIEPTIIEYLQTPPNRETLIELLQSMGIS.ARELLRTNVPEFEAYG-...-LANQAVAE.KDIINAMLADPILINRPIVVTR-.....KGVKLCRPSETLLDILP
Q98J03_RHILO/6-116 YHNPDCGTSRNTLAIIRQSGEEPQVIEYLKTPPSRARLVELLEAMAMT.PRQLLREKGTPYAELG-...-LGDPKWSD.DEILDFMLAHPILINRPIVVTP-.....LGVVLARPSEAVLDILP
ARSC_ECOLI/7-117 YHNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDELVKLIADMGIS.VRALLRKNVEPYEELG-...-LAEDKFTD.DRLIDFMLQHPILINRPIVVTP-.....LGTRLCRPSEVVLEILP
Q9A861_CAUCR/11-121 FHNPACGTSRNTVAMVQAAGYAPQVVEYLKTGWTREQLQDLAAKSGGS.LRALMREKGTPAETLG-...-LLADEVSD.ERLLDAMVEHPILVNRPIVVTP-.....KGVKLCRPSEQVLDLLD
Q9CD46_MYCLE/1-104 ----MYSTSCKMLNLVRKKDFNHITAEYLSMPPSRSELVKIIHIDDVD.VLTAVRKHEPFDAELN-...----LATATdEQLLDSMAEHNTRFKRLFVVTP-.....KGARQAKPIDAVHEIR-
Y176_UREPA/5-122 LYSPNCAVCKKVVRFFRNNQIEITKIIIGEDKIERSMLLDILSLCEDG.FGTIISFKTESSKRLNIt..SKTFLDLST.KELLNLIQNDLNLIRRPLIYQTKnnr.pYRLQIGYDSEEIEIF-K
SPX_BACHD/5-115 LTSPSCTSCRKAKAWLEEHNIPFEERNIFSSPLTVEEVKEVVRMTEDG.TDEIISTRSKVFQELD-...-VELEALPL.QTLFKIISENPGLLRRPIIFDE-.....KRLQVGYNEAEIRRFLP
SPX_BACSU/5-115 YTSPSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTEDG.TDEIISTRSKVFQKLN-...-VNVESMPL.QDLYRLINEHPGLLRRPIIIDE-.....KRLQVGYNEDEIRRFLP
SPX1_LACLA/5-115 YLSPSCTSCRKARAWLQSHKVPFVEHNILTQPMTTNDLRHILTKTENG.TEDIISTRSKVFQKLA-...-VDVDNLTI.NELLDLVTEFPNLLRRPIITDS-.....KHLQIGFNEDEIRAFLP
SPX_STRPY/5-115 FLSPSCTSCRKARAWLVKHEVDFQEHNIITSPLSRDELMSILSFTENG.TEDIISTRSKVFQKLD-...-IDVEELSI.SDLIDLIAKNPSLLRRPIIMDQ-.....KRMQIGFNEDEIRAFLS
Q9CGN5_LACLA/5-115 YLSGSCSSCRKAKKWLRKHHIEFEEINLSKDFMEKDDLIKILSLTENG.FEDIIATRGKTYASLN-...-YNFDELGL.EKAFGLIQENPRLLKRPLIFDE-.....DCLLIGFNEDGIRAFIP
SPX_LACLC/5-115 YTAPSCTSCKKAKTWLSYHHIPFNERNLIADPLSTTEISQILQKCDDG.VEGLISSRNRFVKTLG-...-VDFEDISL.SQAIKIISENPQIMRRPIIMDE-.....KRLHVGYNEEEIRAFLP
Q99XP2_STRPY/5-115 YTISSCTSCKKAKTWLNAHKLAYKEQNLGKEPLTKEEILAILSKTENG.VESIVSSKNRYAKALD-...-CDIEELSV.SEVIDLIQDNPRILKSPILIDD-.....KRLQVGYKEDDIRAFLP
Q9CH93_LACLA/5-115 YTVASCSSCKKAKEWLEKQNLAYQEINLVTSRICKEDILEILALTEEG.TGDIISRRSQAYQRLN-...-IDFETIKL.NDLIQIIEENPTLLRRPLIVDH-.....KRLQVGYNDDEIRKFLP
Q9CFY7_LACLA/5-117 FSSTNCSSSKKMKQWLITNKLEFEEISILENTLLKKDILRILSLTETG.VEEIISKRSSAYKKLSK...IIDFDALTL.NSLVELIVQNQKLLRRPLVVDE-.....HRLQVGYNEDDIRKFLP
YQGZ_BACSU/8-118 YSYPSCTSCRKTKHWLKAHQIEFNERHLFRETPTREELKYILSLTTEG.IDEILATRSQTFKNLN-...-LNIEEITV.NEVLELLIEKPKLLRRPILVDN-.....KKLVIGYNPGELLKLSK
Y127_MYCPN/16-132 LISSSCSSCQKAIEYFKENNLSYTIENFYKKPISDKRFRDILSLSEDG.TESLFSKRADQIRSNTN...-QSVEDLTI.PELIKLIRERPSILRRPIIIQYNssgipKRMRIGYNAAEIKVF-E
Y127_MYCGE/17-133 LISSSCSSCQKAIEFFDQNKISYVVENFYKKPISDKRFKDILSLSEDG.TESLFSKRADQIKATNS...-VSVEELSI.SELIKLVRERPSLLRRPIIIQYNssgipKRMRIGYNSSEIKVF-E
Q9CFZ8_LACLA/8-121 QKSSSNQSAECVTSWFKKRNIPYVVISKTS--LCKEDIVRVLELSNKG.FEEIIVSESKAPKLYSElrsSCDMDQIST.EQMIQFILKNQQLLRSPITFDD-.....RRLLIGYNNEDIRTFIP
Q9PPJ0_CAMJE/4-109 YGIKNCNSVKKAMDALTQKGIVFDFMDIKK--INQDILYTWLKQKS--.FEELINTAGLTSKKLGLn..KEKVKNLNE.KELEKIVLENPSCIKRPIIEYE-.....QNIYIGKEYEKML----
Q9PH31_XYLFA/11-122 YGLKNCDTCKKANQWLDRFGIPYVFVDYRENIPAPEMLVAWAKEAGG-.FEALINKSSTTWRQLPS...-SRKTPGSQ.AEWKLLLREYPQLIRRPVLIASD.....GSVSQGFSDNGFKQRFG
Q9KQ54_VIBCH/22-131 YGIPNCDTMKKARKWLEQAGVAYQFHDYRKEGITPELVAGFCSQLG--.WEQVLNKRGTTFRQLSD...EQK-ATLNA.DNAVALLVEHPAMIKRPILQRQ-.....DELHLGFSDAQYRALFS
YFFB_ECOLI/5-116 YGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNDFINELG--.WEALLNTRGTTWRKLDE...TTRNKITDA.ASAAALMTEMPAIIKRPLLCVPG.....KPMLLGFSDSSYQQFFH
Q9HXX5_PSEAE/6-115 YGIKACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAEHG--.WQTVLNRAGTTFRKLDE...AQK-ADLDE.AKAIELMLAQPSMIKRPVLELG-.....GRTLVGFKPDAYAAALA
Q9A7S8_CAUCR/22-131 YGIKNCDTVAKARKWLDDHGRSYAFHDYKATGIDRPRLEAWVAEVG--.WEVVLNRAGTTFRKLPD...ADR-QDLDA.AKAVDLMLAQPSMIKRPILDLG-.....DRRVVGFKPDWYAAAFG
Q986E7_RHILO/6-115 YGITTCDTVKKARVWLESHDVAYRFHDFRADGLDAKRLDGWVGKVG--.WEKLLNKGSTTFRELAD...KDK-QDLDE.KKAKALMLAKPTMVKRPVLELG-.....DRVLVGFKPDVYEQAVE
Q9CM21_PASMU/5-114 YGIKNCDTVKKALSWLSANNITHQLHDYRVDGLDKSWLAQAEAQFG--.WEVLVNKRSTTWRNLSD...EVK-ENLSK.QTALEVLFEQPTLIKRPIILQD-.....GKALIGFNAKEYAACFK
YFFB_HAEIN/5-114 YGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAETQFG--.WDVLVNKRSTTWRNLDE...QVK-NSLDK.TTALSVLAENPTLIKRPIILQD-.....GKALIGFNEKEYQAAFA
Q9JZ90_NEIMB/5-116 HGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQRPSEAEICSWLEQVP--.LATLLNKRGTSWRKLDA...ETQQKVLSStAEAVKLMSEMPSLIKRPVLECG-.....GKVYAGFSEETYDGIFN
Q9K785_BACHD/6-118 YQYPKCGTCQKAKKWLDQHGIEVNSVHIVEQPPSKEELKQLYEQSGLE.LKKFFNTSGKKYRELGL...KDKVKEASE.DELLETLASDGMLIKRPILT-DG.....DKVTVGFKEAEYEETWK
YUSI_BACSU/6-118 YWYPKCGTCRKAKKWLEEHGKEINEIHIAEQPPSKEELKALYEKSGLD.LKKFFNTSGMKYRELNL...KEKLYHMSE.DEQLELLASDGMLIKRPLTT-DG.....EKVTVGFKEDQFEENWA
Q9CHE4_LACLA/5-116 YWYPKCSTCRKAKAKLDELGIDYQAIDLKETPPSQKNFEKWFKEADFP.IKKFFNTSGLVYRDLNL...KDKLATLSE.KEMAELLSSNGMLIKRPLLVKNG.....QVQQIGFKESSYEKI--