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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03960 phylogeny
for nucleotide alignment


 
(((((((((((((SPX_STRPY/5-115,SPX1_LACLA/5-115),(SPX_BACSU/5-115,SPX_BACHD/5-115)),((Y127_MYCGE/17-133,Y127_MYCPN/16-132),Y176_UREPA/5-122)),(((Q9CFZ8_LACLA/8-121,Q9CGN5_LACLA/5-115),(Q99XP2_STRPY/5-115,SPX_LACLC/5-115)),(Q9CFY7_LACLA/5-117,Q9CH93_LACLA/5-115))),YQGZ_BACSU/8-118),(Q9CHE4_LACLA/5-116,(YUSI_BACSU/6-118,Q9K785_BACHD/6-118))),Q9PPJ0_CAMJE/4-109),((((ARSC_NEIMB/7-117,((ARSC_HAEIN/6-116,Q9CLS9_PASMU/6-116),Q9KQ39_VIBCH/6-116)),(Q9I508_PSEAE/7-117,YFGD_ECOLI/8-119)),((Q98J03_RHILO/6-116,(ARSC_ECOLI/7-117,(Q9A861_CAUCR/11-121,Q9CD46_MYCLE/1-104))),(Q9A083_STRPY/7-117,Q9CJQ0_PASMU/6-116))),Q9RY16_DEIRA/19-127)),Q9JZ90_NEIMB/5-116),Q9PH31_XYLFA/11-122),(((YFFB_HAEIN/5-114,Q9CM21_PASMU/5-114),Q9KQ54_VIBCH/22-131),YFFB_ECOLI/5-116)),Q986E7_RHILO/6-115),Q9A7S8_CAUCR/22-131,Q9HXX5_PSEAE/6-115);
(((((((((((((SPX_STRPY/5-115:0.21257,SPX1_LACLA/5-115:0.27009):0.06657,(SPX_BACSU/5-115:0.22732,SPX_BACHD/5-115:0.15874):0.16394):0.05762,((Y127_MYCGE/17-133:0.14563,Y127_MYCPN/16-132:0.22386):0.26481,Y176_UREPA/5-122:0.55206):0.16525):0.05135,(((Q9CFZ8_LACLA/8-121:0.59230,Q9CGN5_LACLA/5-115:0.27187):0.11670,(Q99XP2_STRPY/5-115:0.33937,SPX_LACLC/5-115:0.26790):0.11912):0.05519,(Q9CFY7_LACLA/5-117:0.35727,Q9CH93_LACLA/5-115:0.26066):0.03427):0.04546):0.19514,YQGZ_BACSU/8-118:0.29186):0.27973,(Q9CHE4_LACLA/5-116:0.36428,(YUSI_BACSU/6-118:0.21380,Q9K785_BACHD/6-118:0.20963):0.19942):0.08883):0.06949,Q9PPJ0_CAMJE/4-109:0.56808):0.15651,((((ARSC_NEIMB/7-117:0.33730,((ARSC_HAEIN/6-116:0.20027,Q9CLS9_PASMU/6-116:0.24502):0.21190,Q9KQ39_VIBCH/6-116:0.21726):0.11205):0.05449,(Q9I508_PSEAE/7-117:0.25161,YFGD_ECOLI/8-119:0.25993):0.06806):0.11599,((Q98J03_RHILO/6-116:0.18518,(ARSC_ECOLI/7-117:0.21748,(Q9A861_CAUCR/11-121:0.25683,Q9CD46_MYCLE/1-104:0.64158):0.06793):0.05987):0.09387,(Q9A083_STRPY/7-117:0.34123,Q9CJQ0_PASMU/6-116:0.21868):0.15930):0.15673):0.16391,Q9RY16_DEIRA/19-127:0.57111):0.27006):0.18316,Q9JZ90_NEIMB/5-116:0.33740):0.13659,Q9PH31_XYLFA/11-122:0.62289):0.08043,(((YFFB_HAEIN/5-114:0.17695,Q9CM21_PASMU/5-114:0.20469):0.26297,Q9KQ54_VIBCH/22-131:0.31545):0.10655,YFFB_ECOLI/5-116:0.32790):0.10750):0.15184,Q986E7_RHILO/6-115:0.13749):0.17742,Q9A7S8_CAUCR/22-131:0.22651,Q9HXX5_PSEAE/6-115:0.15784);