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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03950 alignment
(30 sequences with 250 aa)


SYEC_SCHPO/513-690 APRHTAVESG--DVVKATIVNGPA-......-APYAEDRPRHKKNPELGN.KKSIFA-.NEILIEQADAQ.--.---SFKQ---DEEVTLMDWGNAYVR----EINRDASGKVTSLKL------ELHLDGDFKKTEKKVTWLADT-.--EDkTPVDLVDFDYLITKDKLEEGE......---NYKDFLTPQTEFHSPV--FADVGI-.......................KNLKKGDIIQVERKGYYIVD
SYEC_YEAST/525-697 APRHTAIVNPVK-IHLEGSEAP---......QEPKIEMKPKHKKNPAVGE.KKVIYY-.KDIVVDKDDAD.--.------VINVDEEVTLMDWGNVIIT------KKNDDGSMVAKL---------NLEGDFKKTKHKLTWLADT-.--KDvVPVDLVDFDHLITKDRLEEDE......---SFEDFLTPQTEFHTDA--IADLNVK.......................-DMKIGDIIQFERKGYYRLD
Q9LIZ8_ORYSA/516-690 --RHTAVLKDQR--VLFTLTNGP--......EEPFIRVLPRHKKYEGAGK.KATTFT-.NKIWLESADAS.--.------VISIGEEVTLMDWGNAIIK--EI---KTQNGIITELLG----ELHLEGSVKMTKLK--LTWLPD--.-IEDlVSLSLVEFDYLIKKKKLEEDD......---NFLDNLNPCTCQEFPA--LGDANMR.......................-NLKQGEIIQLERKGYYRCD
O65253_ARATH/529-706 CPRHTAVVAERR--VLFTLTDGP--......DEPFVRMIPKHKKFEGAGE.KATTFT-.KSIWLEEADAS.--.------AISVGEEVTLMDWGNAIVK----EITKDEEGRVTALSG----VLNLQGSVKTTKLK--LTWLPDT-.--NElVNLTLTEFDYLITKKKLEDDD......---EVADFVNPNTKKETLA--LGDSNMR.......................-NLKCGDVIQLERKGYFRCD
SYEP_HUMAN/432-609 APRYVALLK--KEVIPVNVPEAQE-......---EMKEVAKHPKNPEVGL.KPVWYS-.PKVFIEGADAE.--.------TFSEGEMVTFINWGN--LNITKI--HKNADGKIISLDA------KFNLENKDYKKTTKVTWLAET-.THALpIPVICVTYEHLIT--KPVLGK......-DEDFKQYVNKNSKHEELM--LGDPCLK.......................-DLKKGDIIQLQRRGFFICD
SYEP_DROME/510-688 APRYTALEKEKR--VIVNVAGAK-V......ERIQV---SVHPKDESLGK.KTVLLG-.PRIYIDYVDAE.--.------ALKEGENATFINWGN--ILIRKV--NKDASGNITSVDA------ALNLENKDFKKTLKLTWLAVEDdPSAY.PPTFCVYFDNIISKAVLGKDE......---DFKQFIGHKTRDEVPM--LGDPELK.......................-KCKKGDIIQLQRRGFFKVD
Q23315_CAEEL/500-680 APRYTALDSTSPLVSIE-LTDSISD......---DTSNVSLHPKNAEIGS.KDVHKG-.KKLLLEQVDAA.--.------ALKEGEIVTFVNWGN--IKIGKI----EKKGAVITKIS----ATLQLDNTDYKKTTK-VTWLGDVKaEAGKtIPVVTADYDHIISKAIIGKDE......---DWKQFINFDSVHYTKM--VGEPAI-.......................KNVKKGDIIQIQRKGFYIVD
SYQ_ECOLI/339-527 APRAMAVIDPVK-LVIENYQGEG--......EMVTM---PNHPNKPEMGS.RQVPFS-.GEIWIDRADFR.EE.ANKQYKRLVLGKEVRL-RNA-YVIKAERVE-KDA-EGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAA-.--HA.LPVEIRLYDRLFSVPNPGAAD......---DFLSVINPESLVIKQG--FAEPSLK.......................-DAVAGKAFQFEREGYFCLD
SYQ_HAEIN/349-536 APRAMAVIDPVR-VVIENFESEA--......-VLTA---PNHPNRPELGE.RQLPFT-.KELYIDRADFR.EE.ANKQYKRLVLGKEVRL-RNA-YVIKAERVE-KDA-NGEITTIFCTYDPETLGKNPADGRKVKGVIHWVSAV-.--NN.HPAEFRLYDRLFTVPNPGAED......---DIESVLNPNSLVIKQG--FVEQSLA.......................-NAEAEKGYQFEREGYFCAD
SYQ_PASMU/351-538 APRAMAVINPLK-IVIENFSGK---......EMLTA---PNHPNRDELGV.RELPFT-.RELYIDQADFR.EE.ANKQYKRLVLGKEVRL-RNA-YVIKAERVE-KDA-EENITTVYCTYDPDTLGKNPADGRKVKGVIQWVSAE-.--DY.LPAEFRQYGRLFTVANPGAAE......---DIHQVLNPDSLVIKQG--VVEKSLA.......................-NAQPEKAYQFEREGYYCAD
SYQ_VIBCH/340-529 APRAMAVLDPVK-LVIENFAAGT-V......ETLTL---ANHPNKPEMGD.REVPFT-.RELWIEREDFR.EE.ANKKYKRLVLGKEVRL-RGA-YVIKAERIE-KDE-QGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAE-.--KG.VPAEFRLYERLFTVPNPGAAD......---NFAETINPESLVKVQG--YVEPSLV.......................-EAKPEFGYQFERMGYFCAD
SYQ_PSEAE/341-532 APRAMCVLKPLK-VVITNYPEGQ-V......ENLEL---PRHPK-EDMGV.RVLPFG-.RELFIDAGDFE.EV.PPAGYKRLIPGGEVRL-RGS-YVIRADEAI-KDA-DGNIVELRCSYDPDTLGKNPE-GRKVKGVIHWVPAE-.--GS.VECEVRLYDRLFRSANPEKAE......EGGSFLDNINADSLQVLAGC-RAEPSLG.......................-QANPEDRFQFEREGYFVAD
SYQ_NEIMB/343-538 APRLMAVLNPLK-VTLTNFETGR-T......QSRRA---AFHPNHEEMGE.REVPIS-.QTIYIEADDFA.EN.PPKGFKRLIPGGEVRL-RH-GYVIKCDEVV-KDE-AGNVVELKCSIDHDTLGKNPE-GRKVKGVIHWVSAE-.--HA.AEIKVRLYDRLFTVERPDAVRgedgeyLP--FTDFLNPESVKEITA--YAEPAAK.......................-DLPAESRWQFERIGYFVTD
SYQ_XYLFA/364-556 APRRMATIAPLK-LVLTNLPEDH-E......EQLIF---PNHPKDDTQGT.RTMPFS-.RELWIERDDFS.EI.PPKGWKRLVPGGEVRL-RGAG-IARVDEVV-KNA-AGDIIALHGWLDPTSRPGMEGAHRKVKGTIHWVSAP-.--HA.VAAEIRLYDRLFSVEKPDDNT......DGKTYRDVLNPDSKRVVHG--YIEPAAA.......................-QTAPEHAFQFERLGYFVTD
SYQ_BUCAI/341-537 AIRTMAILDPIK-IFLYNLDSNY-K......EEFIV---PNHPNNPEMGT.HKIIFT-.NTIYIDRSDFK.EK.YDKKYKRLKLGEKIRL-RYS-YIIHAEKIE-KDE-YGNISNIICYCDLNTLGRKPK-DNKNPAVIHWISEK-.--NT.LSAEFKLYDQLFNIKNPEQQE......---NFLLYINSKSLIKKFG--FIEKKIGeei................qkkiSNNNIEIFFQFERIGYFCID
SYQ_DROME/568-755 APRRLVVLEPLK-VTIKNFPHAA-P......VQLEV---PDFPQNPQQGT.HKITLD-.KVIYIEQGDFK.LE.PEKGYRRLAPKQSVGL-RHAGLVISVDEIV-KDPATGQVVELIC-----TSQPAEQ-AEKPKAFVQWVSQP-.----.IQLEVRLYEQLFKHKNPEDPN.....eVPGGFLSDISEQSMSVVVA--FADRALN.......................-QAKVYDKFQFERIGFFSVD
Q9BUZ3_HUMAN/402-589 APRAMAVLESLR-VIITNFPAAKSL......-DIQV---PNFPADETKGF.HQVPFA-.PIVFIERTDFK.EE.PEPGFKRLAWGQPVGL-RHTGYVIELQHVV--KGPSGCVESLEV-----TCRRADA-GEKPKAFIHWVSQP-.----.LMCEVRLYERLFQHKNPEDPT.....eVPGGFLSDLNLASLHVVDAA-LVDCSVA.......................-LAKPFDKFQFERLGYFSVD
SYQ_CAEEL/571-761 APRTMAVLEGLK-LTIENFSELNLP......SSVDV---PDFPSDPTDPRkHSVSVD-.REIFIEKSDYKpDD.SDKSFRRLTPKQAVGL-KHIGLVLRF--VKEVKDAEGHVTEVVV-----KAEKLSE-KDKPKAFIHWVAKP-.----.VSCEVRLYDRLFKSKNPEDAQ.....lVPGGFLSDINPDSLTVVYNA-LIDQSIA.......................-KSKVYDRFQFERIGFFCVD
SYQ_LUPLU/578-769 APRAMVVLHPLK-VVITNLEAKSAI......-EVDAKKWPDAQADDASAF.YKIPFS-.NVVYIERSDFR.MQ.DSKDYYGLAPGKSVIL-RYA-FPIKCTEVILADD-NETILEIR-------AEYDPSKKTKPKGVLHWVSQPSpGVDP.LKVEVRLFERLFLSENPAELD......---NWLGDLNPHSKVEISNA-YGVSLLK.......................-DAKLGDRFQFERLGYFAVD
Q9FRI4_ARATH/569-761 APRTMVVLNPLK-VVITNLESDKLI......-ELDAKRWPDAQNDDPSAF.YKVPFS-.RVVYIDQSDFR.MK.DSKDYYGLAPGKSVLL-RYA-FPIKCTNVVFADDNE-TVREIH-------AEYDPEKKSKPKGVLHWVAESSpGEEP.IKVEVRLFEKLFNSENPAELN......--DAWLTDINPNSKMVISGA-YAVSTLK.......................-DAAVGDRFQFERLGYYAVD
SYQ_SCHPO/575-785 -PRLMFLPDPIK-VTLENLDDSY-R......EQIEI---PFNPKDPSMGS.RSAFLT-.KHIYIDRSDFR.EE.ASSDFFRLTLGQPVGLFR-ASHPVVAKRVVKND--EGEPIEII-------AEYDASSSKKPKTFIQWVSRDKeSNSPvLIAETRLFNNLFKCDNPAALK......-EQELAAQLNPESEVVLKNS-IIEPGIYdliksapwp....ktdssagvdkAENPESVRFQAMRVGYFCLD
SYQ_YEAST/567-787 TPRLMFVLDPVE-VVVDNLSDDY-E......ELATI---PYRPGTPEFGE.RTVPFT-.NKFYIERSDFS.ENvDDKEFFRLTPNQPVGLIKVS-HTVSFKSLE-KDE-AGKIIRIHV--NYDNKVEEGSKPKKPKTYIQWVPISSkYNSPlRVTETRVYNQLFKSENPSSH-......-PEGFLKDINPESEVVYKES-VMEHNFGdvvknspwvvdsvknsefyveedKDSKEVCRFQAMRVGYFTLD
SYE_METJA/396-539 ARRFFFVWNPKK-LIIEGAEKK---......-VLKL---RMHPDRPEFGE.RELIFD-.GEVYVVGDELE.--.ENKMY-RLMELFNIV-------VEKVDDIALAKYHSDDFKIARK--------------NKAK-IIHWIPVK-.--DS.VKVKVLM---------PD---......------GEIKE---------GFAEKDFA.......................-KVEVDDIIQFERFGFVRID
SYE_ARCFU/403-538 ANRYFFIWGPVK-IEIVNLPEKK--......-EVEL---PLNPH---TGEkRRLKGE-.RTIYVTKDDFE.--.------RLK-GQVVRL-KDFCNVLLDEKAEF----MGFELEGV---------------KKGKNIIHWLPES-.----.---EA-IKGKVIGEREAEG--......---------------------LVERNAV.......................--RDVGKVVQFERFAFCKVE
SYE_PYRAB/409-557 ANRYFFVADPVP-MEVEGAPEFI--......--AKI---PLHPDHPERGT.RELRFTPgKPIYVSKDDLD.--.------LLKPGSFVRL-KD---LFNVEIVEVGEKIKAKFHSFEY----EIARK-----NKWR-MIHWVPEG-.----.RPCEVII---------PEG--......------DELIVRKG-------LLEKD--.......................ANVKAGEIVQFERFGFVRID
SYE_METTM/400-539 ARRYFFAADPVR-FEIEGLPGPI--......-RVER---SLHPDKPELGN.RILELN-.GDVYLPRGDLR.E-.---GPLRLIDAVNV--------IYSDGELRYHS--EGIEEAREL----------------QAAMIHWVPA--.----.---ESALKA---VVVMPDA--......------SEIEG----------VIEGDA-.......................SELEVDDVVQLERFGFARVD
SYE_THEVO/402-537 AYRFSFTKDPVE-IKMEGSNGLT--......--ARL---PYHPSHPEYGV.RKYEIG-.DTVYISKGD--.--.ADK----IADGERFRL-KDLCYVVRKGDRFLFD---GTEMK-----------------EKTK-IINWCPPN-.----.-SRE-------FQVLKPD---......------GSIDKG---------LIEPA--.......................-SKGYRGISQLERYGYVNFY
Q9P9C2_9EURY/439-572 APRLSFVRNPVE-IDLHGDIPDH--......--IEI---PVHPNHESMGM.RIISMSS.NQILIEKED--.EK.-HPTY-RLKEFADIEI----------------GGQVGSISRSD-----------------RRPIIHWVSTD-.----.SSKEATL-------TLPLQ--......------DNIEHIQ-------GLVEDH--.......................-EYPVGTIIQLERIGYAIIR
Q9HQI1_HALN1/419-571 APRQFLVRDGFE-ARGEGPEESHEAvevpvdDGPDEATPQVHPEHPDRGD.REIPVG-.ERVLVEATDLP.--.--------AAGDRVWLKGYGPVRYDGERFAFLDADIDIVREEGV------------------DVVQWVPAE-.--HN.--VDVRL--RTMD--------......------GDVT----------GYAEPGFA.......................-DRDADEIVQFVRVGFARVD
SYE_SULSO/416-561 AKRIMFVKDAEE-FSVE-LPESL--......-NAKI---PLIPSKQEMN-.RTIIVNPgDKILIESNDAE.--.-DNSILRLMELCNVKVDKH------NRKLIFHSKTLDEAKKV-----------------NAK-IVQWVKSN-.----.--EKVPV-----MVEKAER--......------DEIKMIN-------GYAEKIAA.......................-DLEIDEIVQFYRFGFVRVD