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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03949 phylogeny
for nucleotide alignment


 
(((((((((((((((((Q9CGB2_LACLA/160-380,(O86290_LEUME/160-377,Q82YW6_ENTFA/158-380)),(Q59826_STRBO/163-386,Q99ZS1_STRPY/162-386)),Q9KFS8_BACHD/163-386),Q81I40_BACCR/163-386),(Q81NN6_BACAN/161-385,((MAO4_BACSU/160-384,Q817E9_BACCR/161-385),Q99TG1_STAAM/160-384))),(P97044_LEPIN/176-412,Q9PN12_CAMJE/157-391)),((O59029_PYRHO/162-393,(((O28547_ARCFU/183-413,Q9YF49_AERPE/168-404),(Q9NH04_ENTHI/195-426,Q97UX2_SULSO/162-394)),Q97AM9_THEVO/172-403)),(((((((((MAO2_HAEIN/163-401,Q9JVE6_NEIMA/163-402),MAO2_ECOLI/163-401),Q9PEQ1_XYLFA/164-399),(Q9A543_CAUCR/163-400,MAO1_RHIME/176-413)),MAO2_RHIME/173-410),Q9HPI2_HALN1/161-398),Q9KNQ0_VIBCH/173-409),((Q82D58_STRAW/238-465,Q82J01_STRAW/180-400),Q9KIF8_CORML/168-388)),MAOX_BACST/238-460))),(MAON_SOLTU/296-558,(MAOM_AMAHP/310-578,Q9SIU0_ARATH/310-578))),(((((Q84LP6_MAIZE/352-605,MAOC_FLAPR/363-616),O50015_MAIZE/368-621),Q82X57_NITEU/304-554),(MAOM_HUMAN/280-535,((Q9NIW0_DROME/288-541,MAON_HUMAN/305-557),MAOX_ANAPL/259-511))),(((Q86BE1_DROME/293-544,Q86NT5_DROME/302-553),Q9U1J0_DROME/308-561),Q9U296_CAEEL/308-561))),Q95061_GIALA/259-528),Q9HE50_NEUCR/726-987),(Q27090_TRIVA/280-533,MAOH_NEOFR/301-556)),(((MAOX_SCHPO/273-532,Q97IP4_CLOAB/263-517),(MLES_LACLA/259-515,MLES_OENOE/260-516)),(MAO2_BACSU/291-551,(MAO3_BACSU/274-535,Q81F60_BACCR/274-532)))),Q83DB5_COXBU/276-534),MAOX_MYCTU/265-522),(((Q9KSR8_VIBCH/294-554,MAO1_ECOLI/280-540),Q9HYD5_PSEAE/269-530),(Q9RRB1_DEIRA/283-541,Q9RYN4_DEIRA/291-544))),Q82GM7_STRAW/280-542,Q82MY9_STRAW/294-555);
(((((((((((((((((Q9CGB2_LACLA/160-380:0.23555,(O86290_LEUME/160-377:0.25230,Q82YW6_ENTFA/158-380:0.42298):0.05193):0.19444,(Q59826_STRBO/163-386:0.19183,Q99ZS1_STRPY/162-386:0.26190):0.17990):0.02549,Q9KFS8_BACHD/163-386:0.32629):0.04799,Q81I40_BACCR/163-386:0.22552):0.07750,(Q81NN6_BACAN/161-385:0.23809,((MAO4_BACSU/160-384:0.21849,Q817E9_BACCR/161-385:0.10819):0.07841,Q99TG1_STAAM/160-384:0.20112):0.08080):0.07172):0.06739,(P97044_LEPIN/176-412:0.30800,Q9PN12_CAMJE/157-391:0.27791):0.09961):0.08741,((O59029_PYRHO/162-393:0.31209,(((O28547_ARCFU/183-413:0.21579,Q9YF49_AERPE/168-404:0.32211):0.14774,(Q9NH04_ENTHI/195-426:0.32027,Q97UX2_SULSO/162-394:0.22312):0.12363):0.05449,Q97AM9_THEVO/172-403:0.30862):0.06476):0.13210,(((((((((MAO2_HAEIN/163-401:0.24676,Q9JVE6_NEIMA/163-402:0.21855):0.08467,MAO2_ECOLI/163-401:0.17684):0.10202,Q9PEQ1_XYLFA/164-399:0.32241):0.06855,(Q9A543_CAUCR/163-400:0.21836,MAO1_RHIME/176-413:0.23751):0.04652):0.05640,MAO2_RHIME/173-410:0.23878):0.06935,Q9HPI2_HALN1/161-398:0.23438):0.05419,Q9KNQ0_VIBCH/173-409:0.37914):0.08502,((Q82D58_STRAW/238-465:0.22758,Q82J01_STRAW/180-400:0.27618):0.06481,Q9KIF8_CORML/168-388:0.35430):0.06659):0.10991,MAOX_BACST/238-460:0.24321):0.25751):0.03044):0.30098,(MAON_SOLTU/296-558:0.23070,(MAOM_AMAHP/310-578:0.17373,Q9SIU0_ARATH/310-578:0.18259):0.10722):0.23594):0.09578,(((((Q84LP6_MAIZE/352-605:0.18046,MAOC_FLAPR/363-616:0.15921):0.04920,O50015_MAIZE/368-621:0.14503):0.20330,Q82X57_NITEU/304-554:0.51026):0.07299,(MAOM_HUMAN/280-535:0.33893,((Q9NIW0_DROME/288-541:0.36546,MAON_HUMAN/305-557:0.22583):0.08796,MAOX_ANAPL/259-511:0.19655):0.10402):0.05471):0.07750,(((Q86BE1_DROME/293-544:0.36841,Q86NT5_DROME/302-553:0.28979):0.19093,Q9U1J0_DROME/308-561:0.29627):0.07545,Q9U296_CAEEL/308-561:0.35672):0.11720):0.07936):0.02869,Q95061_GIALA/259-528:0.60202):0.04111,Q9HE50_NEUCR/726-987:0.47748):0.04212,(Q27090_TRIVA/280-533:0.44469,MAOH_NEOFR/301-556:0.35779):0.09845):0.12377,(((MAOX_SCHPO/273-532:0.47571,Q97IP4_CLOAB/263-517:0.31753):0.05400,(MLES_LACLA/259-515:0.23668,MLES_OENOE/260-516:0.24527):0.12674):0.07317,(MAO2_BACSU/291-551:0.24014,(MAO3_BACSU/274-535:0.23892,Q81F60_BACCR/274-532:0.17281):0.10259):0.07362):0.07844):0.11623,Q83DB5_COXBU/276-534:0.44390):0.22095,MAOX_MYCTU/265-522:0.29179):0.08855,(((Q9KSR8_VIBCH/294-554:0.31337,MAO1_ECOLI/280-540:0.21980):0.12944,Q9HYD5_PSEAE/269-530:0.12888):0.17871,(Q9RRB1_DEIRA/283-541:0.32959,Q9RYN4_DEIRA/291-544:0.23225):0.11131):0.09426):0.10250,Q82GM7_STRAW/280-542:0.12819,Q82MY9_STRAW/294-555:0.12848);