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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03949 phylogeny
for amino acid alignment


 
(((((((Q82D58_STRAW/238-465,(Q82J01_STRAW/180-400,Q9KIF8_CORML/168-388)),((Q81NN6_BACAN/161-385,((MAO4_BACSU/160-384,Q99TG1_STAAM/160-384),Q817E9_BACCR/161-385)),((((((Q9A543_CAUCR/163-400,Q9PEQ1_XYLFA/164-399),MAO1_RHIME/176-413),((MAO2_HAEIN/163-401,MAO2_ECOLI/163-401),Q9JVE6_NEIMA/163-402)),Q9KNQ0_VIBCH/173-409),MAO2_RHIME/173-410),((P97044_LEPIN/176-412,Q9PN12_CAMJE/157-391),Q9HPI2_HALN1/161-398)))),(((Q82YW6_ENTFA/158-380,(O86290_LEUME/160-377,Q9CGB2_LACLA/160-380)),MAOX_BACST/238-460),((Q59826_STRBO/163-386,Q99ZS1_STRPY/162-386),(Q81I40_BACCR/163-386,Q9KFS8_BACHD/163-386)))),(O59029_PYRHO/162-393,(Q97AM9_THEVO/172-403,((Q9NH04_ENTHI/195-426,Q97UX2_SULSO/162-394),(O28547_ARCFU/183-413,Q9YF49_AERPE/168-404))))),(((((Q27090_TRIVA/280-533,(MAOH_NEOFR/301-556,Q875H8_MUCCI/304-581)),Q95061_GIALA/259-528),(((((MAOX_SCHPO/273-532,((MLES_LACLA/259-515,MLES_OENOE/260-516),Q97IP4_CLOAB/263-517)),(MAO2_BACSU/291-551,((MAO3_BACSU/274-535,Q81F60_BACCR/274-532),(Q82GM7_STRAW/280-542,Q82MY9_STRAW/294-555)))),MAOX_MYCTU/265-522),Q83DB5_COXBU/276-534),((Q9HYD5_PSEAE/269-530,(MAO1_ECOLI/280-540,Q9KSR8_VIBCH/294-554)),(Q9RRB1_DEIRA/283-541,Q9RYN4_DEIRA/291-544)))),(((MAOM_HUMAN/280-535,((MAOX_ANAPL/259-511,MAON_HUMAN/305-557),((((Q86BE1_DROME/293-544,Q86NT5_DROME/302-553),(MAOM_ASCSU/334-585,Q9U296_CAEEL/308-561)),Q9U1J0_DROME/308-561),Q9NIW0_DROME/288-541))),((Q84LP6_MAIZE/352-605,MAOC_FLAPR/363-616),O50015_MAIZE/368-621)),Q82X57_NITEU/304-554)),Q9HE50_NEUCR/726-987)),MAON_SOLTU/296-558),MAOM_AMAHP/310-578,Q9SIU0_ARATH/310-578);
(((((((Q82D58_STRAW/238-465:0.36541,(Q82J01_STRAW/180-400:0.26638,Q9KIF8_CORML/168-388:0.37533):0.09587):0.12058,((Q81NN6_BACAN/161-385:0.27942,((MAO4_BACSU/160-384:0.09577,Q99TG1_STAAM/160-384:0.23460):0.04752,Q817E9_BACCR/161-385:0.09988):0.12932):0.05044,((((((Q9A543_CAUCR/163-400:0.29837,Q9PEQ1_XYLFA/164-399:0.30146):0.07530,MAO1_RHIME/176-413:0.29164):0.05543,((MAO2_HAEIN/163-401:0.14628,MAO2_ECOLI/163-401:0.19296):0.07021,Q9JVE6_NEIMA/163-402:0.23751):0.07179):0.10525,Q9KNQ0_VIBCH/173-409:0.38857):0.03620,MAO2_RHIME/173-410:0.32699):0.09735,((P97044_LEPIN/176-412:0.33584,Q9PN12_CAMJE/157-391:0.29250):0.08658,Q9HPI2_HALN1/161-398:0.30306):0.06155):0.20775):0.09283):0.04119,(((Q82YW6_ENTFA/158-380:0.45662,(O86290_LEUME/160-377:0.24770,Q9CGB2_LACLA/160-380:0.30129):0.11949):0.33731,MAOX_BACST/238-460:0.29929):0.04894,((Q59826_STRBO/163-386:0.12180,Q99ZS1_STRPY/162-386:0.21664):0.28591,(Q81I40_BACCR/163-386:0.20560,Q9KFS8_BACHD/163-386:0.27841):0.09313):0.09740):0.09224):0.07096,(O59029_PYRHO/162-393:0.39914,(Q97AM9_THEVO/172-403:0.36309,((Q9NH04_ENTHI/195-426:0.41449,Q97UX2_SULSO/162-394:0.33039):0.09749,(O28547_ARCFU/183-413:0.26359,Q9YF49_AERPE/168-404:0.30293):0.05120):0.05597):0.12784):0.11938):0.64394,(((((Q27090_TRIVA/280-533:0.71896,(MAOH_NEOFR/301-556:0.38604,Q875H8_MUCCI/304-581:0.46463):0.20165):0.08460,Q95061_GIALA/259-528:0.74515):0.07924,(((((MAOX_SCHPO/273-532:0.57216,((MLES_LACLA/259-515:0.28662,MLES_OENOE/260-516:0.22938):0.22030,Q97IP4_CLOAB/263-517:0.39498):0.07746):0.10041,(MAO2_BACSU/291-551:0.27591,((MAO3_BACSU/274-535:0.16119,Q81F60_BACCR/274-532:0.18093):0.07046,(Q82GM7_STRAW/280-542:0.16052,Q82MY9_STRAW/294-555:0.23002):0.17689):0.05012):0.10192):0.06548,MAOX_MYCTU/265-522:0.53720):0.04644,Q83DB5_COXBU/276-534:0.51880):0.09353,((Q9HYD5_PSEAE/269-530:0.19301,(MAO1_ECOLI/280-540:0.22624,Q9KSR8_VIBCH/294-554:0.24236):0.07432):0.23898,(Q9RRB1_DEIRA/283-541:0.39110,Q9RYN4_DEIRA/291-544:0.31440):0.24813):0.12620):0.17412):0.08406,(((MAOM_HUMAN/280-535:0.39895,((MAOX_ANAPL/259-511:0.14980,MAON_HUMAN/305-557:0.23486):0.11507,((((Q86BE1_DROME/293-544:0.47363,Q86NT5_DROME/302-553:0.38056):0.32058,(MAOM_ASCSU/334-585:0.24879,Q9U296_CAEEL/308-561:0.18993):0.23069):0.05804,Q9U1J0_DROME/308-561:0.32096):0.08287,Q9NIW0_DROME/288-541:0.34218):0.05517):0.08259):0.08594,((Q84LP6_MAIZE/352-605:0.14265,MAOC_FLAPR/363-616:0.09437):0.04786,O50015_MAIZE/368-621:0.14307):0.31497):0.07680,Q82X57_NITEU/304-554:0.57981):0.15872):0.11001,Q9HE50_NEUCR/726-987:0.56006):0.05122):0.34803,MAON_SOLTU/296-558:0.20679):0.17664,MAOM_AMAHP/310-578:0.12947,Q9SIU0_ARATH/310-578:0.11888);