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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03940 - MSSP)
Male specific sperm protein
(Pfam reference: accession no. PF03940)
(Interpro reference: accession no. IPR005634)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
3 sequences @ 65 aa
(ave. pairwise identity: 0.71)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.75)
nucleotides
(available for above)
3 sequences @ 195 bp
(ave. pairwise identity: 0.63)
New Hampshire format
(total tree length: 0.86)
amino acids, restricted set
(corresp. to available nt seqs)
3 sequences @ 65 aa
(ave. pairwise identity: 0.71)
New Hampshire format
(total tree length: 0.75)