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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03916 alignment
(13 sequences with 458 aa)


Q9JPC7_RHOGE/48-336 VVTGMSDQV---SWGFYIAN.FAFLV--GIAAA--AVLLVIPA.-.-YLFHR-..--G..DVK...QV.VIFGEAL.AVAAVV.A-AMLFVTVDIG-RPE.RIWHMLpV..VGRF--N---WPLS--M---..--LA.-WDVVVLV-.-GYL------..-LLNLG--...-L.PA..........YV.LHAR....WRGE--.E...........PVTARyfPVVIVA.IFWAVSIHTVTAFLFSANAGRPLWHSALLAP-RFIASAFASGPaLIIV.ALLALRR.WGGLAV.KQT.VIDLL-----AV.VMT-.VALQIS......L----FFV.G-.VEL-------FTDFY.-NETTHA.--A......----SMR---...-......YLF-FGLAGAG-----KLQ.P.-WIWTALALNVVAV.VILSIHPLR--RTPRLLVLACGLVF.LG
O30063_ARCFU/31-338 -VTNMRNPF---SWGLYIAM.WAFFV--GTAAGGLVVSSAIYI.-.---FGAR..EFK..PIA...PV.ASTTAFI.--FAVG.A--MVMVLPDLG-RVD.RILNMF.L..YPNF--S---SLLP--W-DL..IVLS.-TYAFLSA-.-IYTYVLLMP..RIAERG--...--.-V..........LG.FLKKdatdLESLRQkS...........EKYAK..VLAPIA.LPFAILIHTVTAWVLATQLSRPWWYGGLLAP-TFIAAAIATG-.-PAV.VILASLF.VYGYED.RLK.NA---YRLLGKIsAAS-.SAALLF......MYYNDFLV.R-.YWW-------GEGLE.-YEALAI.--V......----FRD-YL...H......IHF-LEVLFI-LFSAIVLA.K.-ATTR------ARL.IIGSVSVNVGVLLHRFLLMPPAYNV.FA
Q9HR72_HALN1/45-360 GLIETGMRN---VFSWGLYI.MLFVLFVGLSAG--GLILSSAP.-.-KFFHSQ..R--..-YE...GF.ARLGVLV.SLGCIIvA-GLLIL-PDIG-RPD.RIYQFV.T..SPDF--R---SPMVWDF-GI..VMLY.-GALNVWY-.-LWLLT--RR..DLAARGSRlslWV.SDsaagrdrdrtLM.FWTA....VCAL--.P...........AAVA-..-LHSVTgWIFATQVG--RGDWFSPL---------VAPV--FIAKALVSG-.-LGL.LLVVSIL.ADRFTA.FTA.DRGELTSLGKLL.GIF-.LAFHVV......Y----L--.--.LAA-------ERLPH.-AWAHHFgFWA......----ITSNFLigdT......VYFWL-WTGLGGAVPLLL-.L.-ATPS-LRRRTAVI.FTASVLAVFGTLFEGIRLVFTGYQR.VN
HMEB_ARCFU/40-332 GLNGLSNRV---PWGIVNAG.IPYFI--GLSAG--SLIVSALA.-.-GVFNIK..KYK..VFS...RI.---AAYM.AAAWII.A-AILSIALDIG-KLY.HFMNAV.R..YFNP--T---SIFS--W-NA..FLYS.-SYFVICS-.-IYLLVQFE-..--EMEK--...--.--..........--.----....------.A...........TRFMA..GLAVFW.---AVLVHSGTGAIYSFVYSKELYHSALTPP-MFIVCAITSG-.-L-G.LLLANLY.FTFRFT.KRElDPKLIRGL----.ALI-.FAGLMM......V----LGY.F-.LAV-------EGLEKgYIPALHE.--A......----VQFVFL...TptsgvfWSFWLLV-IFGIAIPII--.I.-VLNPKTGYDLRWI.TFAGILHAALVFAERFYLIIPGQVF.PE
Q9F2A1_CHRVI/43-337 WVSGMNNSV---VWGTPHVF.AVFLI--IAASG--ALNIASIG.-.-TVFKKP..IYK..PLG...RL.--SGLL-.-AVAML.MGGLLVLVMDLG-RPE.RLIVAM.T..NYNF--S---SIFA--W-NI..FLYT.-GFMAIVI-.-AYLWSMADR..QGGPFN--...-Y.P-..........IG.ILAL....VWRL--.A...........-----..------.--LTTGTGSIFGFLV-ARQAY---DAAILGP-MFVALSFAYG-.-LAV.FMLV--L.MFGFEE.EGR.PIG-------PR.MMR-.RLRNLL......A----LFI.GIaLYF-------TLVYH.-LTNLYM.--AkndsleHWLLLSGGIY...T......FLFWVGWILVGSLAPMWI-.L.-YHPV-LSQKREWI.IGACTLVIVGGFSAMYVIIIGSQAFpIA
Q9CPL1_PASMU/2-319 NSPFHFPSL---VWDHTIAV.YLFLL--GISAG--ATMLAVLL.-.-KRA-GL..AGAepSNN...HV.IRCTAFL.APLSLI.I-GLVILIFHLT-KPW.TFWYLM.F..NYST--T---SIMS--M-GV..MLFQ.-AYMLFLL-.-VWLAIIFHQ..LVATLIEQ...YAkP-..........LR.FVNK....LIAF--.A...........AKFTG..LIEIIL.IILSVLLGAYTGFLLSALISYPMLNNPVLPI-LFLASGTSSG-.-IAA.LIFCTLL.FTKEDT.HSP.ALGFLHKFELPV.VLM-.EIFLLA......A----FFI.G-.LYL-------GGGQK.-TVAFET.--A......----LLGGFW...A......HVFWIGVVGIGLVLPLLLNgI.-ATPQ-LKHRKGFM.LLVACLGLIGVLCLRFFILYAGQMT.LA
NRFD_HAEIN/6-321 PVPFHTPNL---VWDYTIAI.YLFLL--GISSG--AVQLAIAY.-.-KRSNKL..ENL..SQN...WI.IRSGVIL.GSVPTL.I-GLTLLIFHLT-RPW.TFWKLM.F..NYQF--N---SVMS--M-GV..MLFQ.-IYMLFLV-.-IWGVVIFKK..EIEALINR...FI.PK..........LQ.FVMK....LIGI--.A...........ERIVS..PVEVIL.FILAAVLGAYTGFLLSALISYPMLNNPVLPA-LFLASGTSSG-.-IAA.TFLIILI.AGKLKG.DSH.ESHFIHKFEVPI.MVT-.ELGLIV......C----FFV.G-.LHF-------GGGQK.-TVALHN.--A......----LSG-FW...G......VVFWVGVLIIGILIPLIAN.M.-FVNDRLKYNRNFI.ILVSIFDLIGVFCLRFFILYAGQLT.VA
NRFD_ECOLI/4-318 TSAFHFESL---VWDWPIAI.YLFLI--GISAG--LVTLAVLL.-.-RRFYPQ..AGG..ADS...TL.LRTTLIV.GPGAVI.L-GLLILVFHLT-RPW.TFWKLM.F..HYSF--T---SVMS--M-GV..MLFQ.-LYMVVLV-.-LWLAKIFEH..DLLALQQR...WL.PK..........LG.IVQK....VLSL--.L...........TPVHR..GLETLM.LVLAVLLGAYTGFLLSALKSYPFLNNPILPV-LFLFSGISSG-.-AAV.ALIAMAI.RQRSNP.HST.EAQFVHRMEIPV.VWG-.EIFLLV......A----FFV.G-.LAL-------GDDGK.-VRALVA.--A......----LGGGFW...T......WWFWLGVAGLGLIVPMLLK.P.-WVNR--SSGIPAV.LAACGASLVGVLMLRFFILYAGQLT.VA
PSRC_WOLSU/6-317 GSIEQYNTV---VWHWPIAV.YLFLA--GLSAG--AIISAIII.-.-KWMKGN..ESS..PWD...GI.IKAGALI.APLTIG.A-GLLLLIFDLT-RPL.HFWKLL.I..FYNF--S---SVMT--L-GV..LALF.-AYFPVVL-.-IFLLGVFKK..ELCDEG--...--.P-..........FG.FLAP....LANI--.A...........YSMAR..PLEIVT.FVLAIGVGAYTGFLLSAMYSYPLLNTPILPL-LFLASGISAG-.-ISG.NLLIGLL.FFGKST.KGE.NVGYLHGLDFKV.ILF-.EAFLLF......I----LFV.G-.MYY-------QGGST.-AEVAKA.--A......----LTTGGL...A......SLFWLGVAGMGLALPVVLN.V.-ALPHGIKHSSGFV.MLNALIVLAGVMALRFYILYAGQTF.VG
O30284_ARCFU/4-302 LNPQHYYLLQQPWWGILIAF.YLFLG--GLGAM--AFCISFYF.-.-WRQKGS..QS-..---...-L.VVGGSLL.GLIAVL.I-GTLFLILDLG-HPE.RFYLVL.LspRLNP--S---SWIV--I-GS..TLLS.-AFMLFAA-.-LFVAPM---..-LRWFK--...WV.P-..........--.-WAK....------.S...........EAAIR..AFGWLA.FITGIGVAAYTGILIGIVFNIPFWNAPALPV-IFMISALSTG-.-LAS.LILLMLV.VDR---.EAH.EIHVMAKTDGFV.MIF-.ELIVLS......I----FLL.I-.RSY-------GPVAA.-IESVNT.--V......----LFG-WL...A......PYFVGGVLLMGLAIPIMLI.FgYEVKR---PGVTAVtVISAIFVLVGGALLRYVVLEAGILQ.IP
Q9Y8M5_AERPE/24-334 D--FKAGGA---IWGVLLVV.YPLMT--GILAG-SYLVSALAYgFgVKRLYRV..AGL..S--...LI.ISVGLLLsAPIFPM.A--------DLK-QPQrAFEIFL.R..PHVI--P---SDAY--P-GVspMAFFgILYIPLLVVaLLNLIFVYRA..DMAAKA--...--.EA..........TGnIIYR....IVSL--.GrgysredverdRRVVK..ILSIIG.VILAILFHGYFDILLASIKSRILWVDPSLPI-RLLASAVFSG-.-AAL.VTVAYYI.AARFSPgESI.DAGTMKTLSLIM.LFG-.LAAALIteitseI----LRV.G-.YYL-------LPGEG.-IEYYES.---......----LRG---...-......SMF-IDNAYYILALILLVS.L.-LIPR-VRENIHSV.--AAIAALA---------------I.VA
Q9Z4S7_SALTY/9-291 EVLAHPQDI---SW-LPWAVqYFFFI--GIAAC--AALFACYL.-.-HWRKKD..AAT..EENralLI.AITCAIT.APLALT.A-DL-----HQTARVW.HF----.-..-YAW--PTPWSWMP--W-GA..LFLP.-LFTGFLA-.-LW-------..-FLAQQ--...--.--..........--.-IKR....LFNK--.S...........YNVTK..WLALAS.ALCAVGLLIYTGREVSVVLARPIWFSYAFPVAMFL-----SA-.-LQA.FFALMIV.AARR--.---.DSVRLPKILWGQ.IWTLaALGLVV......A----MWVsG-.DTL-------SGTAI.-RQWITV.--A......----LSA---...-......KYYAVGWVALWVCTLLFCS.L.-ALRHPLSQLRRVL.LVLSALALCWLM--RWTLLIQVQ-T.VP
Q97XY0_SULSO/39-347 TEPND-EPI---PWGLLVIG.YMFFG--VIGTG--VSTYNSLY.-.-ELFNKNhpEKN..PFK...NIsLRNEWI-.-ALTVL.I-PGWIMVFASTYKPG.E--AVY.I..YTSFRDT---SRIA--WNGL..LYAL.-VGIGIIL-.-EILALIGEKrrEYKDPISR...LL.AW..........LS.SKSV....LILI--.V...........-----..GYAILMeLILDANLGSVFGYLSTWVYEF----GPFMSM-LFVILSFYSG-.-IAMlSFMTPLYnRFRKVK.EDP.NSLSIH--EMYK.ILG-.RDGVLA......T----IAV.G-.FSLLWWLWLTATNQQ.-TSAWAE.--L......----MISGPY...S......VVFLIGGVLVGVIIPIILY.G.-LVYK--RGSSHML.VTSSIFTLLGMFSI---------IT.IA