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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03909 phylogeny
for restricted amino acid alignment


 
(((((((((O44499_CAEEL/185-250,(Q7QHB1_ANOGA/172-238,TF2H1_HUMAN/172-238)),(Q6ZC85_ORYSA/193-259,Q9M322_ARATH/153-219)),(Q6VU63_CRYPV/33-99,((Q6CEW1_YARLI/193-258,(Q6BQQ5_DEBHA/197-263,Q75EX0_ASHGO/213-279)),(TFB1_SCHPO/127-191,TFB1_NEUCR/220-284)))),(((DOS2_YEAST/168-234,(Q6FT57_CANGA/219-285,(Q754R4_ASHGO/155-221,Q6CNS5_KLULA/153-219))),((((Q6IAA3_HUMAN/138-204,Q6INU2_XENLA/138-204),((Q8LE33_ARATH/149-215,(Q8LIF0_ORYSA/181-247,Q9ZVT6_ARATH/171-237)),Q965R9_CAEEL/286-352)),(Q6C2W6_YARLI/249-315,Q7RV03_NEUCR/413-479)),O13905_SCHPO/159-225)),Q6BK45_DEBHA/201-268)),(Q8I303_PLAF7/171-237,((((Q7RAP7_PLAYO/112-179,Q8IFN4_PLAF7/65-132),(Q6IR97_XENLA/162-228,SAP47_DROME/287-353)),(O17591_CAEEL/166-232,O60968_LEIMA/332-397)),((Q8LBI6_ARATH/129-194,((Q70KS2_ORYSA/69-135,Q8LC35_ARATH/196-262),(O49529_ARATH/761-827,Q6L539_ORYSA/57-123))),((Q6Z343_ORYSA/132-198,Q941A9_ARATH/151-217),Q9LRX9_ARATH/78-144))))),O44499_CAEEL/113-180),(((TFB1_SCHPO/52-119,TFB1_NEUCR/139-212),(Q6BQQ5_DEBHA/122-189,(Q6CEW1_YARLI/118-185,((TFB1_YEAST/160-227,(Q6CT84_KLULA/152-219,Q75EX0_ASHGO/138-205)),Q6FNK7_CANGA/143-210)))),(Q6ZC85_ORYSA/115-182,Q9LFZ6_ARATH/417-482))),TF2H1_HUMAN/93-160),Q7QHB1_ANOGA/96-163,TF2H1_DROME/96-163);
(((((((((O44499_CAEEL/185-250:0.42446,(Q7QHB1_ANOGA/172-238:0.11022,TF2H1_HUMAN/172-238:0.17951):0.24693):0.17117,(Q6ZC85_ORYSA/193-259:0.17808,Q9M322_ARATH/153-219:0.11494):0.67221):0.30193,(Q6VU63_CRYPV/33-99:1.01426,((Q6CEW1_YARLI/193-258:0.21206,(Q6BQQ5_DEBHA/197-263:0.28869,Q75EX0_ASHGO/213-279:0.15675):0.22846):0.02325,(TFB1_SCHPO/127-191:0.30877,TFB1_NEUCR/220-284:0.30983):0.22155):0.30448):0.10259):1.01986,(((DOS2_YEAST/168-234:0.44003,(Q6FT57_CANGA/219-285:0.58332,(Q754R4_ASHGO/155-221:0.56270,Q6CNS5_KLULA/153-219:0.85722):0.10682):0.07938):0.28986,((((Q6IAA3_HUMAN/138-204:0.08329,Q6INU2_XENLA/138-204:0.21349):0.36225,((Q8LE33_ARATH/149-215:0.83140,(Q8LIF0_ORYSA/181-247:0.40293,Q9ZVT6_ARATH/171-237:0.49170):0.09527):0.23420,Q965R9_CAEEL/286-352:0.58346):0.14342):0.45475,(Q6C2W6_YARLI/249-315:0.76906,Q7RV03_NEUCR/413-479:0.18428):0.30381):0.05261,O13905_SCHPO/159-225:0.63423):0.28602):0.00000,Q6BK45_DEBHA/201-268:0.53637):0.37510):0.31073,(Q8I303_PLAF7/171-237:0.97240,((((Q7RAP7_PLAYO/112-179:0.33777,Q8IFN4_PLAF7/65-132:0.12563):0.84569,(Q6IR97_XENLA/162-228:0.37847,SAP47_DROME/287-353:0.31485):0.61594):0.15523,(O17591_CAEEL/166-232:0.29823,O60968_LEIMA/332-397:1.96502):0.24964):0.10208,((Q8LBI6_ARATH/129-194:0.63277,((Q70KS2_ORYSA/69-135:0.14679,Q8LC35_ARATH/196-262:0.33198):0.11935,(O49529_ARATH/761-827:0.34391,Q6L539_ORYSA/57-123:0.52732):0.09293):0.15755):0.55124,((Q6Z343_ORYSA/132-198:0.34064,Q941A9_ARATH/151-217:0.14119):0.23164,Q9LRX9_ARATH/78-144:0.34947):0.54543):0.65828):0.13988):0.44336):0.52629,O44499_CAEEL/113-180:0.79876):0.47407,(((TFB1_SCHPO/52-119:0.46327,TFB1_NEUCR/139-212:0.92030):0.08354,(Q6BQQ5_DEBHA/122-189:0.66722,(Q6CEW1_YARLI/118-185:0.50963,((TFB1_YEAST/160-227:0.08060,(Q6CT84_KLULA/152-219:0.20435,Q75EX0_ASHGO/138-205:0.15400):0.01663):0.04921,Q6FNK7_CANGA/143-210:0.14561):0.22267):0.05680):0.28727):0.70255,(Q6ZC85_ORYSA/115-182:0.48972,Q9LFZ6_ARATH/417-482:0.26980):0.44080):0.52412):0.41057,TF2H1_HUMAN/93-160:0.33873):0.21239,Q7QHB1_ANOGA/96-163:0.19111,TF2H1_DROME/96-163:0.15956);