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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF03909 phylogeny
for nucleotide alignment


 
((((O60968_LEIMA/332-397,(O44499_CAEEL/113-180,((((O17591_CAEEL/166-232,(((Q8LBI6_ARATH/129-194,(Q6L539_ORYSA/57-123,(Q70KS2_ORYSA/69-135,(Q8LC35_ARATH/196-262,O49529_ARATH/761-827)))),((Q6Z343_ORYSA/132-198,Q941A9_ARATH/151-217),Q9LRX9_ARATH/78-144)),(Q8I303_PLAF7/171-237,(Q7RAP7_PLAYO/112-179,Q8IFN4_PLAF7/65-132)))),(Q6IR97_XENLA/162-228,SAP47_DROME/287-353)),(((O44499_CAEEL/185-250,(Q7QHB1_ANOGA/172-238,TF2H1_HUMAN/172-238)),(Q6ZC85_ORYSA/193-259,Q9M322_ARATH/153-219)),(Q6VU63_CRYPV/33-99,(((Q6CEW1_YARLI/193-258,TFB1_NEUCR/220-284),TFB1_SCHPO/127-191),(Q6BQQ5_DEBHA/197-263,Q75EX0_ASHGO/213-279))))),(((O13905_SCHPO/159-225,(Q6C2W6_YARLI/249-315,Q7RV03_NEUCR/413-479)),(Q6BK45_DEBHA/201-268,((DOS2_YEAST/168-234,(Q6CNS5_KLULA/153-219,Q754R4_ASHGO/155-221)),Q6FT57_CANGA/219-285))),((Q8LE33_ARATH/149-215,(Q8LIF0_ORYSA/181-247,Q9ZVT6_ARATH/171-237)),((Q6IAA3_HUMAN/138-204,Q6INU2_XENLA/138-204),Q965R9_CAEEL/286-352)))))),(((TFB1_SCHPO/52-119,(Q6CEW1_YARLI/118-185,(Q6BQQ5_DEBHA/122-189,((Q6CT84_KLULA/152-219,(TFB1_YEAST/160-227,Q6FNK7_CANGA/143-210)),Q75EX0_ASHGO/138-205)))),TFB1_NEUCR/139-212),(Q6ZC85_ORYSA/115-182,Q9LFZ6_ARATH/417-482))),TF2H1_HUMAN/93-160),Q7QHB1_ANOGA/96-163,TF2H1_DROME/96-163);
((((O60968_LEIMA/332-397:0.72757,(O44499_CAEEL/113-180:0.70871,((((O17591_CAEEL/166-232:0.42794,(((Q8LBI6_ARATH/129-194:0.31463,(Q6L539_ORYSA/57-123:0.27719,(Q70KS2_ORYSA/69-135:0.17678,(Q8LC35_ARATH/196-262:0.27139,O49529_ARATH/761-827:0.26687):0.04189):0.10751):0.12339):0.26155,((Q6Z343_ORYSA/132-198:0.29876,Q941A9_ARATH/151-217:0.17210):0.12066,Q9LRX9_ARATH/78-144:0.30071):0.46216):0.21364,(Q8I303_PLAF7/171-237:0.52929,(Q7RAP7_PLAYO/112-179:0.23669,Q8IFN4_PLAF7/65-132:0.09772):0.32681):0.09444):0.13985):0.15743,(Q6IR97_XENLA/162-228:0.33181,SAP47_DROME/287-353:0.34926):0.26348):0.24436,(((O44499_CAEEL/185-250:0.25774,(Q7QHB1_ANOGA/172-238:0.31203,TF2H1_HUMAN/172-238:0.17387):0.22188):0.15081,(Q6ZC85_ORYSA/193-259:0.06656,Q9M322_ARATH/153-219:0.23211):0.36229):0.15355,(Q6VU63_CRYPV/33-99:0.78344,(((Q6CEW1_YARLI/193-258:0.20519,TFB1_NEUCR/220-284:0.35810):0.12317,TFB1_SCHPO/127-191:0.31215):0.13869,(Q6BQQ5_DEBHA/197-263:0.35569,Q75EX0_ASHGO/213-279:0.24110):0.05748):0.19655):0.10663):0.27062):0.09675,(((O13905_SCHPO/159-225:0.51719,(Q6C2W6_YARLI/249-315:0.55799,Q7RV03_NEUCR/413-479:0.19246):0.12930):0.03275,(Q6BK45_DEBHA/201-268:0.32170,((DOS2_YEAST/168-234:0.48000,(Q6CNS5_KLULA/153-219:0.52783,Q754R4_ASHGO/155-221:0.38577):0.19730):0.10063,Q6FT57_CANGA/219-285:0.33412):0.12200):0.14868):0.14820,((Q8LE33_ARATH/149-215:0.34298,(Q8LIF0_ORYSA/181-247:0.31821,Q9ZVT6_ARATH/171-237:0.29493):0.12521):0.15160,((Q6IAA3_HUMAN/138-204:0.12185,Q6INU2_XENLA/138-204:0.22635):0.30474,Q965R9_CAEEL/286-352:0.33865):0.15772):0.07615):0.10572):0.28471):0.04319):0.22469,(((TFB1_SCHPO/52-119:0.57258,(Q6CEW1_YARLI/118-185:0.35799,(Q6BQQ5_DEBHA/122-189:0.64559,((Q6CT84_KLULA/152-219:0.21052,(TFB1_YEAST/160-227:0.17925,Q6FNK7_CANGA/143-210:0.26065):0.10454):0.13260,Q75EX0_ASHGO/138-205:0.22984):0.11905):0.08288):0.10923):0.04479,TFB1_NEUCR/139-212:0.57937):0.23053,(Q6ZC85_ORYSA/115-182:0.35469,Q9LFZ6_ARATH/417-482:0.22389):0.38323):0.20847):0.19085,TF2H1_HUMAN/93-160:0.26360):0.19662,Q7QHB1_ANOGA/96-163:0.25039,TF2H1_DROME/96-163:0.15829);