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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF03874 - RNA_pol_Rpb4)
RNA polymerase Rpb4
(Pfam reference: accession no. PF03874)
(Interpro reference: accession no. IPR005574)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
15 sequences @ 180 aa
(ave. pairwise identity: 0.26)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 11.54)
nucleotides
(available for above)
15 sequences @ 540 bp
(ave. pairwise identity: 0.40)
New Hampshire format
(total tree length: 7.86)
amino acids, restricted set
(corresp. to available nt seqs)
15 sequences @ 180 aa
(ave. pairwise identity: 0.26)
New Hampshire format
(total tree length: 11.54)